BAC Information

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BAC

Clone NameB6Ng01-116L05
Chromosome3 (Build37)
Map Location 106,279,532 - 106,280,040
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070
Downstream gene2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4, Slc6a17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116L05.bB6Ng01-116L05.g
ACCDH921633DH921634
length1,155503
definitionDH921633|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L05, 5' end.DH921634|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaatatttcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgtaagcttgtacaaccactctggaaatcaggctgttggtgcctca
gaaaattgggcatagtactaccagaagatcccacaataactctcctcagt
atatatccagacgatattccaactggtaggaaggacacatgctccactat
gttcatagcagccgtatgtaaaatagccataagctggaaataacccaaat
atccctcaacagaggaatggatacagaaaatgtgataacatttacacaat
ggagtactactaacctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagttagggaacccaatcacaa
aagaacacatgatatgtactcattcataagtggatattagcccctaaagt
ttgaatacccaagacataagatacaatttacaaaacacatgaaactcaag
aagaatgaagaccaaagtgaggacactttgccccttcttagaattgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgaaatga
aaggatggaccatctagaggctgccataccagaggattcatcccataatc
agcccaaatgctgacaccattgcatatactagcaagattttgctgaaagg
accctgatatagctatcatttgtgaggctatgccggggcctgcaaacaca
taagtggatgctcacagtcagctattggatggacacagggccccaatgga
ggagctagagaaagtatcaagagctaaaggggtctgcaacctctagtgaa
cacaatatgactacagtaccccagagttcgtgtctctagctgcatatgta
gcaaagatgctacttgcatcactggaagagagtcctttgctgcaacttaa
tttctagtacgggaatgcaggtaaaatgggaagggtggtcaggagtgggg
gggag
tcacccgaggaataccgaatggcagagaagcacctgaaaaaatgttcaac
atccttaaccatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcacaccagtcagaatgtctaagatcaaaaattcaggtgacagcagttgc
tggcgaggatgtggagaaagagcaacactcctccattgttggtgggattg
caagcttgtacaaccactcgtaccttctgtttttaaactgtattgagact
acaatgagttaagggttaaaagatgagtaaagaaaagaacctggattgca
tacacattcaagcatgctctttctactcttcacaacagccctgccaggtg
gttttatgctctcaggaaaaatgaggccatgagcttgcctaaaccaagaa
tgaactgtgagcagaagtggggctgaagtccacatttgtgaatatcagat
gcctaagttcattctatcatgttccactgcatccctcagtgaagtaaggg
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106279532_106280040
seq2: B6Ng01-116L05.g_69_577

seq1  GAATTCTCACCCGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCCGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAACCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAACCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGTTGCTGGCGAGGATGTGGAGAAAGAGCAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGGCGAGGATGTGGAGAAAGAGCAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAAGCTTGTACAACCACTCGTACCTTCTGTTTTTAAACTGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGCTTGTACAACCACTCGTACCTTCTGTTTTTAAACTGTATT  250

seq1  GAGACTACAATGAGTTAAGGGTTAAAAGATGAGTAAAGAAAAGAACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTACAATGAGTTAAGGGTTAAAAGATGAGTAAAGAAAAGAACCTGG  300

seq1  ATTGCATACACATTCAAGCATGCTCTTTCTACTCTTCACAACAGCCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATACACATTCAAGCATGCTCTTTCTACTCTTCACAACAGCCCTGC  350

seq1  CAGGTGGTTTTATGCTCTCAGGAAAAATGAGGCCATGAGCTTGCCTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTTTTATGCTCTCAGGAAAAATGAGGCCATGAGCTTGCCTAAAC  400

seq1  CAAGAATGAACTGTGAGCAGAAGTGGGGCTGAAGTCCACATTTGTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGAACTGTGAGCAGAAGTGGGGCTGAAGTCCACATTTGTGAATA  450

seq1  TCAGATGCCTAAGTTCATTCTATCATGTTCCACTGCATCCCTCAGTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGCCTAAGTTCATTCTATCATGTTCCACTGCATCCCTCAGTGAAG  500

seq1  TAAGGGTGT  509
      |||||||||
seq2  TAAGGGTGT  509