BAC Information

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BAC

Clone NameB6Ng01-117M13
Chromosome3 (Build37)
Map Location 150,258,349 - 150,348,379
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040620, LOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117M13.bB6Ng01-117M13.g
ACCDH922434DH922435
length998964
definitionDH922434|Mus musculus domesticus DNA, BAC clone: B6Ng01-117M13, 5' end.DH922435|Mus musculus domesticus DNA, BAC clone: B6Ng01-117M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,258,349 - 150,259,021)(150,347,414 - 150,348,379)
sequence
gaattccctgtggctggagttacatatatctgatgtaagtaaccttctga
tgcagatgctaggaactgaagtagggttctctagacaagcaatgagtact
cttaactacttaaccatattccaagctctgaaaggacctatttttcctat
cagtgaaatttgtttttattttattttttaatagtttttattaggtattt
tcctcatttacatttccaatgctatccaaaagtcccccataccctcccac
ccactcccctacccactcactcccactttttggccctggcttttccctgt
actggggcatataaagtttgcaagtccaatgggcctctctttccagtgat
ggtcaactaggccatcttttgatacatatgcagctagagtcaagagctcc
ggggtactggttagttcatattattgttccacctatagggttgcagatcc
ctttagctccttgggtactttctctagctcctccattgggggccctgtga
tccatccaatagctgactgtgagcatccacttatgtgtttgctaggccct
ggcatagtctcacaagtgacagctatatctgggtcctttcagcaaaatct
tgctaatgtatgcaatggtgtcagctttggaagctgattatgggatggaa
ccctggatatggcaggctctagatggtccatccttttgacacaagtccaa
actttgtctctgtaactccttccatgggtgttttgctcccaattctaaga
aggagcaaagtgtccacagtttggtcttcgttcttcttcagtttcatgcg
tttaacaaattgtatcttatatcttaggtatcctaagtttctgggctaat
atccacttatcagtgagtacatatggtgtgagttcctttgtgattgggtt
accgcactcaggatgataccctccaggtccatccatttgcctaggaattt
cataaattcattctttttatagctgagtagtactccattgtgtaaatg
gaattcaagtcttatcctgtttctggattcagctgccgtttccagggcat
aatatcagcaaagaacacagtgaaagtatcaatgtatctaataaaaataa
tccagaagttcaaagaccaagtctttcaacagataaacataaatacttag
ctctgggcacaaaaatagaaggaggttgtcatgataaacataggaagggc
tgcatttgccatctcaaaggttctaggagcatgtgggttaactggtaaag
ttcttttttatttgagtaagagacaaaaggtcttcaccctattagaattc
ttataccatctatttaatcttctatattcctgtgttggcacttcactttg
cagctacaaaacatacttcctgaagttcatagaatgttccaattattttt
cttcttgcagccccattgtaacctggtattatggccaaagaaatcttaca
ttactttcctccgcttaagtaaactatggttactttctgttatctgtaaa
gcatacctctttattgaagaaattgtttaggctctggtgggtgttgtcac
atgcatcatctgcattctaaaattaatttaagtctaatttgttctgtgta
attgaattattggagattggattttgggcctttgttttgctatacttatt
aactggttgctattggtagagatgaaagctattgagtatgatttgctttg
caatcagttatttcactaaacaatcatagatcctgaatttaatacactat
acatttaaagtgcattgttaatttgacaagtatttgtcatgaaaaaagct
gaaaatgaaaagagcaaaagggagctatcttgacaaatgaaaatggcagt
ttttaaccaacttccaggtttagaatctttgtgatatatcaaaatttgta
aatatttgtaggtgaaaagtggccctgggcaaatgacagcatgtgggtgt
ttgtgcatctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150258349_150259021
seq2: B6Ng01-117M13.b_45_717

seq1  GAATTCCCTGTGGCTGGAGTTACATATATCTGATGTAAGTAACCTTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTGGCTGGAGTTACATATATCTGATGTAAGTAACCTTCTGA  50

seq1  TGCAGATGCTAGGAACTGAAGTAGGGTTCTCTAGACAAGCAATGAGTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGCTAGGAACTGAAGTAGGGTTCTCTAGACAAGCAATGAGTACT  100

seq1  CTTAACTACTTAACCATATTCCAAGCTCTGAAAGGACCTATTTTTCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTACTTAACCATATTCCAAGCTCTGAAAGGACCTATTTTTCCTAT  150

seq1  CAGTGAAATTTGTTTTTATTTTATTTTTTAATAGTTTTTATTAGGTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATTTGTTTTTATTTTATTTTTTAATAGTTTTTATTAGGTATTT  200

seq1  TCCTCATTTACATTTCCAATGCTATCCAAAAGTCCCCCATACCCTCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTACATTTCCAATGCTATCCAAAAGTCCCCCATACCCTCCCAC  250

seq1  CCACTCCCCTACCCACTCACTCCCACTTTTTGGCCCTGGCTTTTCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCTACCCACTCACTCCCACTTTTTGGCCCTGGCTTTTCCCTGT  300

seq1  ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGAT  350

seq1  GGTCAACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCC  400

seq1  GGGGTACTGGTTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACTGGTTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGATCC  450

seq1  CTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGA  500

seq1  TCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCAATAGCTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCT  550

seq1  GGCATAGTCTCACAAGTGACAGCTATATCTGGGTCCTTTCAGCAAAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGTCTCACAAGTGACAGCTATATCTGGGTCCTTTCAGCAAAATCT  600

seq1  TGCTAATGTATGCAATGGTGTCAGCTTTGGAAGCTGATTATGGGATGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGTATGCAATGGTGTCAGCTTTGGAAGCTGATTATGGGATGGAA  650

seq1  CCCTGGATATGGCAGGCTCTAGA  673
      |||||||||||||||||||||||
seq2  CCCTGGATATGGCAGGCTCTAGA  673

seq1: chr3_150347414_150348379
seq2: B6Ng01-117M13.g_67_1030 (reverse)

seq1  ACACAGATGCACAAACACCCACATGCTGTCATTTGCCCAGGGCCACTTTT  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACACAGATGCACAAACACCCACATGCTGTCATTTGCCCAGGGCCAC-TTT  49

seq1  TCACCTACAAATATTTACAAATTTTGATATATTCACAAAGATTCTAAACC  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACCTACAAATATTTACAAATTTTGATATA-TCACAAAGATTCTAAACC  98

seq1  TGGAAGTTGGTTAAAAACTGCCATTTTCATTTGTCAAGATAGCTCCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTGGTTAAAAACTGCCATTTTCATTTGTCAAGATAGCTCCCTTT  148

seq1  TGCTCTTTTCATTTTCAGCTTTTTTCATGACAAATACTTGTCAAATTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTTCATTTTCAGCTTTTTTCATGACAAATACTTGTCAAATTAAC  198

seq1  AATGCACTTTAAATGTATAGTGTATTAAATTCAGGATCTATGATTGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACTTTAAATGTATAGTGTATTAAATTCAGGATCTATGATTGTTTA  248

seq1  GTGAAATAACTGATTGCAAAGCAAATCATACTCAATAGCTTTCATCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATAACTGATTGCAAAGCAAATCATACTCAATAGCTTTCATCTCTA  298

seq1  CCAATAGCAACCAGTTAATAAGTATAGCAAAACAAAGGCCCAAAATCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGCAACCAGTTAATAAGTATAGCAAAACAAAGGCCCAAAATCCAA  348

seq1  TCTCCAATAATTCAATTACACAGAACAAATTAGACTTAAATTAATTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATAATTCAATTACACAGAACAAATTAGACTTAAATTAATTTTAG  398

seq1  AATGCAGATGATGCATGTGACAACACCCACCAGAGCCTAAACAATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGATGATGCATGTGACAACACCCACCAGAGCCTAAACAATTTCTT  448

seq1  CAATAAAGAGGTATGCTTTACAGATAACAGAAAGTAACCATAGTTTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGAGGTATGCTTTACAGATAACAGAAAGTAACCATAGTTTACTT  498

seq1  AAGCGGAGGAAAGTAATGTAAGATTTCTTTGGCCATAATACCAGGTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGAGGAAAGTAATGTAAGATTTCTTTGGCCATAATACCAGGTTACA  548

seq1  ATGGGGCTGCAAGAAGAAAAATAATTGGAACATTCTATGAACTTCAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCTGCAAGAAGAAAAATAATTGGAACATTCTATGAACTTCAGGAA  598

seq1  GTATGTTTTGTAGCTGCAAAGTGAAGTGCCAACACAGGAATATAGAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTTGTAGCTGCAAAGTGAAGTGCCAACACAGGAATATAGAAGAT  648

seq1  TAAATAGATGGTATAAGAATTCTAATAGGGTGAAGACCTTTTGTCTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGATGGTATAAGAATTCTAATAGGGTGAAGACCTTTTGTCTCTTA  698

seq1  CTCAAATAAAAAAGAACTTTACCAGTTAACCCACATGCTCCTAGAACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATAAAAAAGAACTTTACCAGTTAACCCACATGCTCCTAGAACCTT  748

seq1  TGAGATGGCAAATGCAGCCCTTCCTATGTTTATCATGACAACCTCCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGCAAATGCAGCCCTTCCTATGTTTATCATGACAACCTCCTTCT  798

seq1  ATTTTTGTGCCCAGAGCTAAGTATTTATGTTTATCTGTTGAAAGACTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTGCCCAGAGCTAAGTATTTATGTTTATCTGTTGAAAGACTTGG  848

seq1  TCTTTGAACTTCTGGATTATTTTTATTAGATACATTGATACTTTCACTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAACTTCTGGATTATTTTTATTAGATACATTGATACTTTCACTGT  898

seq1  GTTCTTTGCTGATATTATGCCCTGGAAACGGCAGCTGAATCCAGAAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGCTGATATTATGCCCTGGAAACGGCAGCTGAATCCAGAAACAG  948

seq1  GATAAGACTTGAATTC  966
      ||||||||||||||||
seq2  GATAAGACTTGAATTC  964