BAC Information

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BAC

Clone NameB6Ng01-118N01
Chromosome3 (Build37)
Map Location 70,008,280 - 70,139,835
singlet/doubletdoublet
Overlap genenone
Upstream geneArl14, Ppm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414
Downstream geneLOC100041384, LOC625868, LOC670542, EG625901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118N01.bB6Ng01-118N01.g
ACCDH923197DH923198
length1,087816
definitionDH923197|Mus musculus domesticus DNA, BAC clone: B6Ng01-118N01, 5' end.DH923198|Mus musculus domesticus DNA, BAC clone: B6Ng01-118N01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,008,280 - 70,009,375)(70,139,020 - 70,139,835)
sequence
gaattcagttccaaagtttgagtaacacagccttgatttttgtctgtcca
ctttctgagtttgctaacttgggcaaatgacttatcttctgtgacttcaa
cttcgttatgcatgggaagtgctgaacgcaatggcattattgggtatcat
gagaattcagtgactacataaaggactttaaaaaatgtctagtccctgag
aaataccacattgtttctgctattagtattaattttaatggcttcggtct
ccattatataatagaaagaaaactactccttgagtcagatagactggaat
ttcattactggctcagccattatctatatgatactgggaaaattactttg
catatctgagcagctttcctccttgaataagaaaatgggactaatagtta
tctggttggggtctttctttctttccttctttctttcttccttccttcct
ttctttctttctttctttctttctttctttctttctttctttctttcttt
ctttctttcttctgaatgtggctagcaataaaaatactgtgatcaaagca
gaaagagcacagtagacaacccaccacattattattcttgttcattaatt
ccctcccaattgtttattaagtgtctattatgtaccagatggagtctgta
tgttggagagggagagagttttgaagaacagttcttgcttttcctgctta
tatcagcttcctgttgctggaacaaaaataaacatgataaagaaggaagt
gattatcttggctcacagttacagagatttccatctatggatgtttggtt
ttataactttgggcccatggcaaagccaaacactgtgatggggaatgtat
ggagggcaaatttgttatgtctagtgttccagaagcaagagaaagaaatg
aaaatgccctgggcaatagcctcttcaaaggcatattctcaaagaactat
tgcttcttcaacaagacctcatttcctaagttttaatcacccccaaatcc
cacagctgtgatgagctttcagagacgtctgagatctggacatacagtaa
taaacatatgagccacgctcagggtgacttgccaagc
gaattctcagcaggtaaagatggagaaaaggatgtatcaaaaaggaagta
cagtgctactgaatcaataacatttttttttttttttgcaaaaagacaga
gtgagcaaaactctgcaatgcctaattgccatatgagactgaaatggagg
tgcttaacaacctggttaaaataaaaggtctgattctgattaagaaaacg
aagagcttaacatagatctacgtgtgagccagtgcacatcacttccttaa
ttccactgtaattggaacatctttgcatggtttattaaatggaaaacatg
gaacagatatcacacaagagttttagagaaactaagtatttgagggtaca
gggaaacctcattgcttgcactaaatagtttcaaactcagttcctctcag
taacccctaaagtaagaacgctggaatgattccaaggttgtcacaaatat
ggctgtcattatacaggcgtgctaaagaatctgagtatataacacacagg
ctcacagttgctttctagcatccagtactcccatgcagagatttgaacac
ctgggatttttggcattaacttcttcactgcccagatttcatattgtagc
aaattagatacagtaaaatgaatttgtttcagacacgaattcataaaacc
aggaggctgaggcaggtggtgaattctagattctatcctatctcaagaca
aagggagggaaaggaagagaaatttgtgtaaacattggattcagaagacc
caggatggctacaacaataacaacaacaacaacaagatgatgatgatggt
ggtgtgatggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70008280_70009375
seq2: B6Ng01-118N01.b_48_1134

seq1  GAATTCAGTTCCAAAGTTTGAGTAACACAGCCTTGATTTTTGTCTGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCAAAGTTTGAGTAACACAGCCTTGATTTTTGTCTGTCCA  50

seq1  CTTTCTGAGTTTGCTAACTTGGGCAAATGACTTATCTTCTGTGACTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAGTTTGCTAACTTGGGCAAATGACTTATCTTCTGTGACTTCAA  100

seq1  CTTCGTTATGCATGGGAAGTGCTGAACGCAATGGCATTATTGGGTATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTTATGCATGGGAAGTGCTGAACGCAATGGCATTATTGGGTATCAT  150

seq1  GAGAATTCAGTGACTACATAAAGGACTTTAAAAAATGTCTAGTCCCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCAGTGACTACATAAAGGACTTTAAAAAATGTCTAGTCCCTGAG  200

seq1  AAATACCACATTGTTTCTGCTATTAGTATTAATTTTAATGGCTTCGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCACATTGTTTCTGCTATTAGTATTAATTTTAATGGCTTCGGTCT  250

seq1  CCATTATATAATAGAAAGAAAACTACTCCTTGAGTCAGATAGACTGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATATAATAGAAAGAAAACTACTCCTTGAGTCAGATAGACTGGAAT  300

seq1  TTCATTACTGGCTCAGCCATTATCTATATGATACTGGGAAAATTACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACTGGCTCAGCCATTATCTATATGATACTGGGAAAATTACTTTG  350

seq1  CATATCTGAGCAGCTTTCCTCCTTGAATAAGAAAATGGGACTAATAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGAGCAGCTTTCCTCCTTGAATAAGAAAATGGGACTAATAGTTA  400

seq1  TCTGGTTGGGGTCTTTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGGGGTCTTTCTTTCTTTCCTTCTTTCTTTCTTCCTTCCTTCCT  450

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  500

seq1  CTTTCTTTCTTCTGAATGTGGCTAGCAATAAAAATACTGTGATCAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTCTGAATGTGGCTAGCAATAAAAATACTGTGATCAAAGCA  550

seq1  GAAAGAGCACAGTAGACAACCCACCACATTATTATTCTTGTTCATTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCACAGTAGACAACCCACCACATTATTATTCTTGTTCATTAATT  600

seq1  CCCTCCCAATTGTTTATTAAGTGTCTATTATGTACCAGATGGAGTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCAATTGTTTATTAAGTGTCTATTATGTACCAGATGGAGTCTGTA  650

seq1  TGTTGGAGAGGGAGAGAGTTTTGAAGAACAGTTCTTGCTTTTCCTGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAGAGGGAGAGAGTTTTGAAGAACAGTTCTTGCTTTTCCTGCTTA  700

seq1  TATCAGCTTCCTGTTGCTGGAACAAAAATAAACATGATAAAGAAGGAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTTCCTGTTGCTGGAACAAAAATAAACATGATAAAGAAGGAAGT  750

seq1  GATTATCTTGGCTCACAGTTACAGAGATTTCCATCTATGGATGTTTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTTGGCTCACAGTTACAGAGATTTCCATCTATGGATGTTTGGTT  800

seq1  TTATAACTTTGGGCCCATGGCAAAGCCAAACACTGTGATGGGGAATGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACTTTGGGCCCATGGCAAAGCCAAACACTGTGATGGGGAATGTAT  850

seq1  GGAGGGCAAAATTTGTTATGTCTAGTGTTCCAGAAGCAAGAGAAAGAAAT  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGC-AAATTTGTTATGTCTAGTGTTCCAGAAGCAAGAGAAAGAAAT  899

seq1  GAAAATGCCCTGGGCAATAGCCTCTTCAAAGGCATATTCTCAAAGAACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCCTGGGCAATAGCCTCTTCAAAGGCATATTCTCAAAGAACTA  949

seq1  TTGCTTCTTCAACAAGACCTCATTTCCTAAGGTTTTAATCACCCCCCAAA  1000
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TTGCTTCTTCAACAAGACCTCATTTCCTAA-GTTTTAATCA-CCCCCAAA  997

seq1  TCCCAACAGCTGGTGATGAGCTTTCAGGAGACGTCTGAGATCTGGACCAT  1050
      |||| |||||| |||||||||||||| ||||||||||||||||||| |||
seq2  TCCC-ACAGCT-GTGATGAGCTTTCA-GAGACGTCTGAGATCTGGA-CAT  1043

seq1  AACAGTAATAAACATATGAGCCAACGC-CAGGGTGACTTGGCCAAGC  1096
       ||||||||||||||||||||| |||| ||||||||||| |||||||
seq2  -ACAGTAATAAACATATGAGCC-ACGCTCAGGGTGACTT-GCCAAGC  1087

seq1: chr3_70139020_70139835
seq2: B6Ng01-118N01.g_69_884 (reverse)

seq1  CCACCACCATCACACCACCATCATCATCATCTTGTTGTTGTTGTTGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCATCACACCACCATCATCATCATCTTGTTGTTGTTGTTGTTAT  50

seq1  TGTTGTAGCCATCCTGGGTCTTCTGAATCCAATGTTTACACAAATTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGCCATCCTGGGTCTTCTGAATCCAATGTTTACACAAATTTCTC  100

seq1  TTCCTTTCCCTCCCTTTGTCTTGAGATAGGATAGAATCTAGAATTCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCCTCCCTTTGTCTTGAGATAGGATAGAATCTAGAATTCACCA  150

seq1  CCTGCCTCAGCCTCCTGGTTTTATGAATTCGTGTCTGAAACAAATTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCAGCCTCCTGGTTTTATGAATTCGTGTCTGAAACAAATTCATT  200

seq1  TTACTGTATCTAATTTGCTACAATATGAAATCTGGGCAGTGAAGAAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTATCTAATTTGCTACAATATGAAATCTGGGCAGTGAAGAAGTTA  250

seq1  ATGCCAAAAATCCCAGGTGTTCAAATCTCTGCATGGGAGTACTGGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAAAATCCCAGGTGTTCAAATCTCTGCATGGGAGTACTGGATGCT  300

seq1  AGAAAGCAACTGTGAGCCTGTGTGTTATATACTCAGATTCTTTAGCACGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAACTGTGAGCCTGTGTGTTATATACTCAGATTCTTTAGCACGC  350

seq1  CTGTATAATGACAGCCATATTTGTGACAACCTTGGAATCATTCCAGCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAATGACAGCCATATTTGTGACAACCTTGGAATCATTCCAGCGTT  400

seq1  CTTACTTTAGGGGTTACTGAGAGGAACTGAGTTTGAAACTATTTAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTAGGGGTTACTGAGAGGAACTGAGTTTGAAACTATTTAGTGCA  450

seq1  AGCAATGAGGTTTCCCTGTACCCTCAAATACTTAGTTTCTCTAAAACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAGGTTTCCCTGTACCCTCAAATACTTAGTTTCTCTAAAACTCT  500

seq1  TGTGTGATATCTGTTCCATGTTTTCCATTTAATAAACCATGCAAAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATATCTGTTCCATGTTTTCCATTTAATAAACCATGCAAAGATGT  550

seq1  TCCAATTACAGTGGAATTAAGGAAGTGATGTGCACTGGCTCACACGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTACAGTGGAATTAAGGAAGTGATGTGCACTGGCTCACACGTAGA  600

seq1  TCTATGTTAAGCTCTTCGTTTTCTTAATCAGAATCAGACCTTTTATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTAAGCTCTTCGTTTTCTTAATCAGAATCAGACCTTTTATTTTA  650

seq1  ACCAGGTTGTTAAGCACCTCCATTTCAGTCTCATATGGCAATTAGGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTTGTTAAGCACCTCCATTTCAGTCTCATATGGCAATTAGGCATT  700

seq1  GCAGAGTTTTGCTCACTCTGTCTTTTTGCAAAAAAAAAAAAAAATGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTTTTGCTCACTCTGTCTTTTTGCAAAAAAAAAAAAAAATGTTAT  750

seq1  TGATTCAGTAGCACTGTACTTCCTTTTTGATACATCCTTTTCTCCATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGTAGCACTGTACTTCCTTTTTGATACATCCTTTTCTCCATCTT  800

seq1  TACCTGCTGAGAATTC  816
      ||||||||||||||||
seq2  TACCTGCTGAGAATTC  816