BAC Information

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BAC

Clone NameB6Ng01-118P12
Chromosome3 (Build37)
Map Location 63,150,368 - 63,151,467
singlet/doubletsinglet
Overlap geneMme
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118P12.bB6Ng01-118P12.g
ACCDH923305DH923306
length1,2581,094
definitionDH923305|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P12, 5' end.DH923306|Mus musculus domesticus DNA, BAC clone: B6Ng01-118P12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatgttagataccattcttttatcagatgtaggattca
taaagatcttttcccaatctgtgggtggacatttggtcttattgacagtg
tcctttgccttatagaagtatttcaattttatgaggtcccattttttgat
tgttgatcttagaacataagccattgatgctgtgttcaggaaagtttccc
ttgtgtctgtgttcatagatttcccccactttctcttctattaaattcag
tgtatctagttttatgtggaggtccgtgatccacttggacttgagcttta
tataaggagataagaatggatcaatttacaataaatatttaagatgattt
ttttaaaaaggatggattaatttgtcttcttctacatgccaaccgctggt
tgagccagcaccatttgttgaaaatgctgtttttttttccccactggatg
gtttcagttcctttgtcaaagaccaaatgaccataggtgtttggggtcat
ttttgggtcttcaattctattttatttatctacctgcctgtctctgttcc
aatactgtgtgttctggatttcctggatgttttgggttaggaccttttta
tattttgcattttctttgactgttgtgccaatgtttactatggtatcttc
tgcagccaacagtctctcttctatctcttgtattctgtttgtgatgcttg
catctatgactcttgatctctttcctaggttttctaactccagggttgtc
tccctttgtgatttctttatttttttctagttccatttttagatcctgga
tggttttgtttattcccttcacctgtttggttgtgttttcctgtaatttt
taaaaggatttttgtgtttcctctttaagggcttctagctgtttacctgt
gttctcctgtattttctttaagggagttatttatgtctttcttaaagtcc
tctgtcatcatcaggagatgtgattttaaatctgattcttgcgttttctg
gtgtgatgggatatccaggacttgctgtagtggagactgggttctgatga
tgccagtagccttgggtttctgttgcttattgatcttggacttgcctccc
aacaatatgattatctttctctgctaccttcccttgatgtttttcgtaac
agacagttccttcctatgaatctgtgtgtgtgtcagatctcctagagttg
aagcgtcctctgatacctctgtagtcctattgagtacttcgtgtagactc
gctgagat
gaattccaggacagtcagagacctgtctcagagaagggtggggaaacagt
aagtagaaataagtaatggagcaattaaaataaatatatttaaaataatc
acatagaactaataataaacagtggacaaatgcgaggttgatcacaaaga
aacctacttccccctcgtacaattcatgtcattcatttaacctgagagga
gctgcagtgactttggggaacacaaggaatataaaaactgaaggaaccaa
tattcagcagtgtattaccatgaagctcaaagagcccttatctgttttct
cagctgaatcagtgaagtggaaagataattatatcctccaagattgggag
cactaaatgttacccgttttataaaattgaaaagtctggagagaaaaaaa
aatcatgaaataatattacacatggagcaatggagcaaatgggaaagctg
cagcctggaaggatggacagggttaggagataaatttcaagcctactttt
attgtttatttttgttttagctaaagcaaagagccattgcagagaacact
ggttgaggctgtcaggtgctccatttgtaaatagcacatcaggctattta
attgctggttggggacatatgatgtttgcatttgaagactgcggttatgg
agataattgtatctctgtattcaatgttgtaatttttgcaggccttggca
attaaagaaaggattggctatcctgatgacatcatttccaatgagaacaa
actgaataatgagtatcttgaggtaagtctccaccgtgatatttggaact
ggtggcaaggtcaccacagcctggaaaggacagacagacactgtataaaa
taccctaaaaccatagctcccactaatgcctaataccttcaacactgata
cccaagctatgcctaatttaaccttttctgtcattgtacgaggttctctt
cgtgtcatatttcattttaatattggtgacaaaacatttatcctttagag
cagtgattctcacctggggagtcaccaccttctttgaccaaactctgcct
caaagtatttacatatcatacataatagtagcaaaatgatagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63150368_63151467
seq2: B6Ng01-118P12.g_68_1161

seq1  GAATTCCAGGACAGTCAGAGACCTGTCTCAGAGAAGGGTGGGGAAACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGTCAGAGACCTGTCTCAGAGAAGGGTGGGGAAACAGT  50

seq1  AAGTAGAAATAAGTAATGGAGCAATTAAAATAAATATATTTAAAATAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAAATAAGTAATGGAGCAATTAAAATAAATATATTTAAAATAATC  100

seq1  ACATAGAACTAATAATAAACAGTGGACAAATGCGAGGTTGATCACAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAACTAATAATAAACAGTGGACAAATGCGAGGTTGATCACAAAGA  150

seq1  AACCTACTTCCCCCTCGTACAATTCATGTCATTCATTTAACCTGAGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTTCCCCCTCGTACAATTCATGTCATTCATTTAACCTGAGAGGA  200

seq1  GCTGCAGTGACTTTGGGGAACACAAGGAATATAAAAACTGAAGGAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGTGACTTTGGGGAACACAAGGAATATAAAAACTGAAGGAACCAA  250

seq1  TATTCAGCAGTGTATTACCATGAAGCTCAAAGAGCCCTTATCTGTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCAGTGTATTACCATGAAGCTCAAAGAGCCCTTATCTGTTTTCT  300

seq1  CAGCTGAATCAGTGAAGTGGAAAGATAATTATATCCTCCAAGATTGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAATCAGTGAAGTGGAAAGATAATTATATCCTCCAAGATTGGGAG  350

seq1  CACTAAATGTTACCCGTTTTATAAAATTGAAAAGTCTGGAGAGAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAATGTTACCCGTTTTATAAAATTGAAAAGTCTGGAGAGAAAAAAA  400

seq1  AATCATGAAATAATATTACACATGGAGCAATGGAGCAAATGGGAAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGAAATAATATTACACATGGAGCAATGGAGCAAATGGGAAAGCTG  450

seq1  CAGCCTGGAAGGATGGACAGGGTTAGGAGATAAATTTCAAGCCTACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGAAGGATGGACAGGGTTAGGAGATAAATTTCAAGCCTACTTTT  500

seq1  ATTGTTTATTTTTGTTTTAGCTAAAGCAAAGAGCCATTGCAGAGAACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTATTTTTGTTTTAGCTAAAGCAAAGAGCCATTGCAGAGAACACT  550

seq1  GGTTGAGGCTGTCAGGTGCTCCATTTGTAAATAGCACATCAGGCTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGGCTGTCAGGTGCTCCATTTGTAAATAGCACATCAGGCTATTTA  600

seq1  ATTGCTGGTTGGGGACATATGATGTTTGCATTTGAAGACTGCGGTTATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTTGGGGACATATGATGTTTGCATTTGAAGACTGCGGTTATGG  650

seq1  AGATAATTGTATCTCTGTATTCAATGTTGTAATTTTTGCAGGCCTTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTGTATCTCTGTATTCAATGTTGTAATTTTTGCAGGCCTTGGCA  700

seq1  ATTAAAGAAAGGATTGGCTATCCTGATGACATCATTTCCAATGAGAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAAAGGATTGGCTATCCTGATGACATCATTTCCAATGAGAACAA  750

seq1  ACTGAATAATGAGTATCTTGAGGTAAGTCTCCACCGTGATATTTGGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATAATGAGTATCTTGAGGTAAGTCTCCACCGTGATATTTGGAACT  800

seq1  GGTGGCAAGGTCACCACAGCCTGGAAAGGACAGACAGACACTGTATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAAGGTCACCACAGCCTGGAAAGGACAGACAGACACTGTATAAAA  850

seq1  TACCCTAAAACCATAGCTCCCACTAATGCCTAATACCTTCAACACTGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTAAAACCATAGCTCCCACTAATGCCTAATACCTTCAACACTGATA  900

seq1  CCCAAGCTATGCCTAATTTAACCTTTCTTGTCATTGTACGAGGTTCTCTT  950
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  CCCAAGCTATGCCTAATTTAACCTTTTCTGTCATTGTACGAGGTTCTCTT  950

seq1  CGGTGTCAATATTTCATTTTAATATTGGTGACAAAAACATTTAATCCTTT  1000
      | ||||| |||||||||||||||||||||||| ||||||||| |||||||
seq2  C-GTGTC-ATATTTCATTTTAATATTGGTGAC-AAAACATTT-ATCCTTT  996

seq1  AGAGCAGTGATTCTCAACCTGTGAGTCACCA-CTCCTTTGACCAAACTTC  1049
      |||||||||||||||| |  | ||||||||| || |||||||||||| ||
seq2  AGAGCAGTGATTCTCACCTGGGGAGTCACCACCTTCTTTGACCAAAC-TC  1045

seq1  TGCTCCAAAAGTATTTACATTATCATACATAATAGTAGCAAAATGATAGC  1099
      ||| |  |||||||||||| ||||||||||||||||||||||||||||||
seq2  TGC-CTCAAAGTATTTACA-TATCATACATAATAGTAGCAAAATGATAGC  1093

seq1  T  1100
      |
seq2  T  1094