BAC Information

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BAC

Clone NameB6Ng01-119A19
Chromosome3 (Build37)
Map Location 41,059,443 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119A19.bB6Ng01-119A19.g
ACCDH923363DH923364
length9861,172
definitionDH923363|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A19, 5' end.DH923364|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttaggtctgagccccatttttaatagggttatttgattt
tctgcagtccaccttcttgagttctttatatatattgtatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttgcctcgcaaaagctttgcaattttat
aaggtcccatttgttgattctcgatattacagcacaagccattgctcttc
tattcaggaatttttcccctgtgcccatatcttcaaggcttttccctagg
gaaaacctcatttacttttaagcatacaggtctttactccaggtttctaa
cttactgtttgtgagccactgattaaagtacagattgtgaatggaggtaa
cccctggttactttgtattctgagacaaggaaacattttccatttcaagg
agacagtgtcatctaaaaagttcactcttgaaaatttcactatcatgtta
caaaacacaactctcatagtgatgcttacaatgtcttaactgggcatgca
attttaggtatgccactctgcattgctgtttattttagcagtctttaggt
acacatggctataggccacagattcgattaggcttattttgaaggttttc
ttttttcttcttttaagatggacttattcctatttaatgtgtatcaaggc
tttgtctgcattgtgtcatttcaccaggtggatgaaataactgcagaagc
tagatgaaggcagcagattaactctaagaactggagttagaaataattgt
tacctgctatgtggatgctgggaacctaacctgacatcatccagaacttt
tcccctattcattcattcattcattcattcattcattcattcactcattt
tatatcccaatttctgccccctcccatcccctccacacagttcctccctc
catcccctcctcctcttttctcagagagtggaggcc
gaattccagtggagagattcagacaccaacccagccacaaaacctgtgat
gcataattatttttttttcctataagatgtgctagggaaaattttgggag
tatctaaccatgactggtccaggctgaacctcatgccctgagagagaatc
tactcctgacactgcctggagattcaggaaccagataatagctcagagac
caaagacagaagcaaataagactggcaaaaacacaaaagtcaatgaaatg
attctgttcagtgccagggtaaacagaggagggcagagtgtggaatcggt
gattagtcactcagaagacttctaagggagcaaaacttaattctccaggg
acagcaagaaaggggaaaagtcacacacacacacacacacacacacacac
acacacagacacacacactaggtggatgaatcaagtttcaacaagtccca
acaacctcattcctacacatatagtcagacatgcatatagacagacatat
tggaaggatagagcaaagttacaaccattaagctccaactatttttttct
cttagctttttaaaaatgtctaagacaaagttttttaatgcaaaaataaa
attacttcatagctacaagttatatattctctaaaaataatcaccacaaa
tacatattctccagaaacagattaaaatcattacaaaaaagaaattacag
caggattgttgattatgtcctcttttgaaactcatacctaattaacactt
cccatctttctctccacaagttcatcataatcccaaagtaataattcctt
ttcataaactaacaaagttttagcaagccagtctatagtagcaagttctt
ttcctatggttacctgctgacacttctgcttaccaagaagcagatcatca
cctatcttttgaagtctgttcagctgatctggtaatcatctatctctgct
ctacatcataatggaattacttactctttgtctgatcctctttcatggta
cacacaaactgtgacacattcctagatactaggtaaagacccagccacct
tagatgatgatttcttgatcatatactgtccagctatttctgctctacat
aatgctggagattggagctcagacctcgactagactctgcatttagaagc
aggagccgttttcaatctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059443_41059737
seq2: B6Ng01-119A19.b_46_340 (reverse)

seq1  GGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAAC  50
      |||||||||||||||||||||| ||||||||||||||||||| |||||| 
seq2  GGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAATAGAAG  50

seq1  AGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGA  100
      |||||||||||||||||||| || ||||||  ||||||||||||| || |
seq2  AGCAATGGCTTGTGCTGTAATATCGAGAATCAACAAATGGGACCTTATAA  100

seq1  AACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG  150
      || |||||||||| ||| ||||||||||||| ||||||||||||||||||
seq2  AATTGCAAAGCTTTTGCGAGGCAAAAGACACTGTCAATAAGACAAAAAGG  150

seq1  -CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGG  200

seq1  ACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAAT  249
      |||||||| |||||||||| ||||||||||||||||||| | ||||||||
seq2  ACTAATATACAATATATATAAAGAACTCAAGAAGGTGGACTGCAGAAAAT  250

seq1  CAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  295
      |||||||||| ||| |||||||||||||||| ||||||||||||||
seq2  CAAATAACCCTATT-AAAAATGGGGCTCAGACCTAAACAAAGAATT  295