BAC Information

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BAC

Clone NameB6Ng01-119D23
Chromosome3 (Build37)12 (Build37)
Map Location 41,058,986 - 41,059,73782,328,063 - 82,328,552
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119D23.bB6Ng01-119D23.g
ACCDH923513DH923514
length1,048484
definitionDH923513|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D23, 5' end.DH923514|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,058,986 - 41,059,737)(82,328,063 - 82,328,552)
sequence
gaattctttgtttaactctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggattggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcagtttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttcacctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacatctttaggtcgggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgtggaggccagagtttgatccaagagagctggagt
tattagtagttgtggatcacccaacttgtgtgctggggaccagattcagg
gtctctgcaagagcagcaagcactcttaactgctgtgtcagctctctagc
ctcttaatgccatataatttaccacttcttaagtttgttttgattgaaat
tttttccacttcctggattatggtggctaagcagcacagccaagaaccca
gggttctttatccaagcccaggtgaataccctgctttctactctactg
ctttccttcctgccagatctcaggtgagtctacctttctagttttagtga
cacctcccttatgtggctgtcagatgcacttcatgatcttaaaagagaca
gggtaggagatggactggagcatgcgccaaccatatgagctcatgactga
ggccacactcctaggggaatctctgcttaccttgaaagtgcacatcacct
ctctacctctatgttggatttcttccactcataagagcttctggactttc
cttccactgatgccattgggcgagtgatgttctggtatgtactaacacta
cttgtccccagttatacagaagtgaccaattaatgcagttgtcaccttct
ctgtcatttctagtgttctaaaatctgtgaggacgagcactgtttgtttg
gttaattgcctctatctgccgaggtgagagcatatgtcagatgcttggta
aaggtgtatgtggcatgagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058986_41059737
seq2: B6Ng01-119D23.b_49_801 (reverse)

seq1  CATCAAAATTCCAACTCAATTCTTCAACGAATTTGAAAGAGCAATCTGCA  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGAGCAATCTGCA  50

seq1  AATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAG  100

seq1  GATAACAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTA  150
      ||||| |||||||||||||||||||||||||| ||||||||| | |||||
seq2  GATAAAAGAACCTCTGGTGGAATCACCATGCCCGACCTAAAGATGTACTA  150

seq1  CAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAG  200

seq1  CAGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTAT  250
       ||||||||||||||||||||||||| |||||| ||| ||||||||||||
seq2  TAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTAT  250

seq1  GGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGA  300

seq1  CAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAA  350
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAA  350

seq1  GAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAG  400
      ||||| |||| |||||| ||||||||||||||||||||||||||||||||
seq2  GAATGTGAATCGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAG  400

seq1  TGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGA  450
      |||||||||||||  |||||||||||||||||||||||||||||||||| 
seq2  TGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGT  450

seq1  GAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGC  500
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  GAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGA  500

seq1  ATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGAC  550
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  ATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGAC  550

seq1  CTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGAC  600
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCATAAAACTGCAAAGCTTCTGCAAGGCAAAAGACACTGTCAATAAGAC  600

seq1  AAAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAG  649
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCAATCCTAAATCAG  650

seq1  ATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCC  699
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  ATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCC  700

seq1  AGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGA  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGTTAAACAAAGA  750

seq1  ATT  752
      |||
seq2  ATT  753

seq1: chr12_82328063_82328552
seq2: B6Ng01-119D23.g_69_558

seq1  GAATTCCTTTCCTTCCTGCCAGATCTCAGGTGAGTCTACCTTTCTAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCCTTCCTGCCAGATCTCAGGTGAGTCTACCTTTCTAGTTT  50

seq1  TAGTGACACCTCCCTTATGTGGCTGTCAGATGCACTTCATGATCTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACACCTCCCTTATGTGGCTGTCAGATGCACTTCATGATCTTAAAA  100

seq1  GAGACAGGGTAGGAGATGGACTGGAGCATGCGCCAACCATATGAGCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGTAGGAGATGGACTGGAGCATGCGCCAACCATATGAGCTCAT  150

seq1  GACTGAGGCCACACTCCTAGGGGAATCTCTGCTTACCTTGAAAGTGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGCCACACTCCTAGGGGAATCTCTGCTTACCTTGAAAGTGCACA  200

seq1  TCACCTCTCTACCTCTATGTTGGATTTCTTCCACTCATAAGAGCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTCTACCTCTATGTTGGATTTCTTCCACTCATAAGAGCTTCTGG  250

seq1  ACTTTCCTTCCACTGATGCCATTGGGCGAGTGATGTTCTGGTATGTACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTCCACTGATGCCATTGGGCGAGTGATGTTCTGGTATGTACTA  300

seq1  ACACTACTTGTCCCCAGTTATACAGAAGTGACCAATTAATGCAGTTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACTTGTCCCCAGTTATACAGAAGTGACCAATTAATGCAGTTGTCA  350

seq1  CCTTCTCTGTCATTTCTAGTGTTCTAAAATCTGTGAGGACGAGCACTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGTCATTTCTAGTGTTCTAAAATCTGTGAGGACGAGCACTGTT  400

seq1  TGTTTGGTTAATTGCCTCTATCTGCCGAGGTGAGAGCATATGTCAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTTAATTGCCTCTATCTGCCGAGGTGAGAGCATATGTCAGATGC  450

seq1  TTGGTAAAGGTGTATGTGGCATGAGGGAGGGAGGGAGGGA  490
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAAGGTGTATGTGGCATGAGGGAGGGAGGGAGGGA  490