MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-119O08
Chromosome	3 (Build37)
Map Location	17,350,799 - 17,351,934
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040034, LOC100040059, EG383936, LOC622737
Downstream gene	ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040034 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100040059 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG383936 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383936 MGI:3643834
definition	note : predicted gene, EG383936 pseudo : _no_value

name	LOC622737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	ENSMUSG00000074674 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038486 MGI:3642301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs

name	LOC100040120 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Cypt12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75439 MGI:1922689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs

name	LOC545508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545508
definition	note : heat shock protein 1, alpha-like pseudo : _no_value

name	Bhlhb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59058 MGI:1930001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp7b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13123 MGI:104978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040034 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250833 GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001473985.1

name	ENSMUSG00000074674 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250835 GeneID:100038486 MGI:3642301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs product : predicted gene, ENSMUSG00000074674 transcript_id : XM_001474096.1

name	LOC100040120 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250837 GeneID:100040120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040120 transcript_id : XM_001474113.1

name	Cypt12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250811 GeneID:75439 MGI:1922689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs product : cysteine-rich perinuclear theca 12 transcript_id : XM_001472148.1

name	Bhlhb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803428 GeneID:59058 MGI:1930001
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic helix-loop-helix domain containing, class B5 transcript_id : NM_021560.3

name	Cyp7b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353883 GeneID:13123 MGI:104978
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 7, subfamily b, polypeptide 1 transcript_id : NM_007825.3

name	LOC100040034 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250834 GeneID:100040034
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474035.1

name	ENSMUSG00000074674 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250836 GeneID:100038486 MGI:3642301
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474146.1

name	LOC100040120 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250838 GeneID:100040120
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474163.1

name	Cypt12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250812 GeneID:75439 MGI:1922689
definition	codon_start : 1 product : cysteine-rich perinuclear theca 12 protein_id : XP_001472198.1

name	Bhlhb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981200 CCDS:CCDS17253.1 GeneID:59058 MGI:1930001
definition	GO_function : GO:0016564 - transcriptional repressor activity [Evidence IDA] codon_start : 1 exception : mismatches in translation note : basic helix-loop-helix (bHLH) gene, class B, beta3 product : basic helix-loop-helix domain containing, class B5 protein_id : NP_067535.2

name	Cyp7b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677410 CCDS:CCDS17254.1 GeneID:13123 MGI:104978
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence TAS] [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008396 - oxysterol 7-alpha-hydroxylase activity [Evidence IDA] GO_process : GO:0006699 - bile acid biosynthesis [Evidence IDA]; GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0007586 - digestion [Evidence TAS]; GO:0006118 - electron transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 7b1 product : cytochrome P450, family 7, subfamily b, polypeptide 1 protein_id : NP_031851.2

name	LOC100040059 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040059
definition	number : 2 pseudo : _no_value

name	LOC100040059 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040059
definition	number : 1 pseudo : _no_value

name	LOC622737 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622737
definition	number : 1 pseudo : _no_value

clone name	MSMg01-122L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-059C22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-048F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-119O08.b	B6Ng01-119O08.g
ACC	DH923986	DH923987
length	1,239	1,141
definition	DH923986\|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O08, 5' end.	DH923987\|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctgatctttccaagacttttatcatgaatgagtgttggattttg tcaaatacattctcagcatctaatgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacgttgttggatttctgtatattatacc atccctgcatccctggaatgaaacatacttggtcaggatggatgattgtt tcgatgtgttcttggattcgtttagcgagaattttattgagtatttttgt atcgatattcataagggaaattagtctgaagttctctatctttgttgagt ctttctggtttaggtgtcagagtaattgtgacttcatagaatgagcttgg tagagtacattcagctcctattttgtggaatagtttgtgcagtagtggaa ttagatcttctttgaaagtctgatggaactctgcactaaacccatctgtt cctgggctttttttggttgggagactattaataactgcttctatttcttt aggggatattggactgtttagatccttaacctgatcctgatttaactttg gtacctggtatctgtctagaaatttgtccatttcatccacttggttgatt tcacccttgagtttgattatttccggctgtctacttctcttgggtgaatt tgattccttttgttctagagcttttaggtgtgttgtcaagatgctactgt atgctctcgatagtttctttttggaggctctcaagctatgagttttcctc ttagaaatgctttcattgtgtcccataagtttgggtatggtgtggcttca ttttcattaaactctaaaaagtccttaatttctttcttttattcctcctt gaccaaggtatcattgagaagagtgtttttcagttttcacgtgaatgttg gctttctattatttatgttgttattgaagatcagccttaatccatggtga tctgataggatgcatgggacatttcagcacttttgtttctgtgtggcttg tttgtgaccatatatggtcagttttggagaatgtacatgaggtgctgaga ggttaatcttttattttaaggataaatgtctgttgatatctgttgatcat tgtttcacaacttctgttagtttcaatgggtccctgtttagtctgttaca tgatcgtccataggtagaagtgtgtgtgagttcacatattggtgaggcca tggtgccttgaccttactaaaggtgctctatacatgatg	gaattcatcttatctttgtattttcgttcttcctttctctgtagctttgt actgatttgtacttatggctcaaaatcctttgctagtcactgtgtttaaa gcttacaactgaaaaggcatcatggtgattaagaaacaagactcttttaa aagagtcttctctgaaatattttgtttgaaaacatgaattagcacctgct ttaaacactcatcattgaagggaaaattatatagatcacataaacttcca aaatatcaaaatcaacatcaaagattaattagattttaaaatgatattgt gagtaattatgtagatttttatttttgttgtaatatttagaaaaggctgt agtaattttatgttctattcattttgttttgggggttttatttataaata tatttttttatttacattttatatgacatgctggccacccctcagaaact ttccaaagttgtggtctgaaaatatgaaagttaggtatatatttgaggac aatctctgctttttctgaccttaccttaaatatctcggaaatgcagtgtc aaacagtgtgagagcccatgtgtcactgttggactttctcttggttccta ctgcctttaatggaggtactttccccgtgaactctaaggatatattttgt gctaatctatggtttaacttcaattctgaggctgaaaagaaactgaaaac cccacagagtttattgtaggttttaagaaaccagaggagagaaacaaaaa gaggggctcaaaaaaaaaaaaaaaaatcaccataacctaggactgactga ctttgaagttgctagtctaagttacctttgcagaatgtgtcttttagtca aagtctataatgtgctcttttcctcttgtctatcttcacaaggcagttca aactatttaccacctttgagtaaacctctccaataacatatttctttgct ggctgaaatcactgtcatgttttgtgattactgtgaaaagaacttatgtt actttttacatagtcacagcctagaccctgtattttaatagcactaacat tttgagatggtactttaaggccatgatgtttgtagctgctcttaaatata agagcttggtcttgcaacctttaattgcctcagttggggga
quality values	Open. Hide. 61 61 20 36 61 61 61 47 61 38 38 61 61 61 61 61 38 12 49 61 61 55 61 61 61 61 17 17 32 10 15 16 18 18 13 32 36 33 59 59 59 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 41 28 30 36 44 36 35 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 57 46 57 53 53 57 53 57 57 53 47 57 57 53 57 57 47 40 57 57 57 57 47 57 57 47 43 57 57 57 57 53 53 57 57 53 32 57 57 53 40 47 57 57 53 57 53 53 40 57 57 57 53 53 45 57 43 40 53 53 43 53 50 57 50 57 57 53 53 52 52 50 53 57 52 53 45 53 57 57 53 47 34 53 52 53 39 57 57 53 53 53 53 45 53 50 53 57 50 53 31 52 50 42 52 22 57 45 50 43 52 57 52 52 27 41 30 57 53 52 53 52 53 45 53 45 53 45 53 30 46 53 53 40 53 53 57 50 39 53 50 53 53 44 53 52 33 40 40 40 37 37 57 57 42 57 57 57 57 37 47 28 53 30 57 36 57 50 57 40 57 30 37 38 39 34 37 40 52 23 24 57 46 27 38 37 36 44 31 40 40 28 48 57 31 27 40 24 40 52 30 40 36 52 44 53 33 53 35 33 53 47 33 18 18 25 20 44 53 36 53 57 53 28 31 37 37 57 24 41 34 44 34 27 20 14 30 19 38 51 51 29 34 28 18 24 29 51 44 31 44 40 32 46 51 51 51 48 30 29 37 29 11 22 19 33 32 46 38 31 30 46 29 23 8 46 46 16 24 14 11 8 15 21 23 30 25 46 47 29 18 19 18 29 5 30 18 29 29 34 20 11 27 26 29 23 38 33 17 43 20 34 36 23 46 51 51 29 29 28 28 36 51 43 9 41 23 29 24 26 34 29 34 25 36 23 38 41 29 29 31 51 27 25 16 21 41 16 29 29 51 23 23 17 32 14 27 28 18 25 27 25 27 28 23 39 23 33 26 28 22 25 29 23 21 38 22 24 16 25 28 27 31 33 41 14 28 28 20 20 7 15 24 20 25 23 14 28 12 25 31 23 34 33 51 24 6 9 25 11 42 17 23 25 25 16 15 27 34 51 38 28 18 5 5 10 12 14 7 11 11 6 6 11 6 4 7 17 21 51 33 11 18 34 17 15 9 6 5 4 18 23 23 28 27 7 12 31 17 23 44 44 14 34 12 14 9 17 33 19 22 6 6 31 6 10 11 15 23 25 14 33 23 34 19 7 4 23 3 5 5 4 4 5 5 12 4 31 37 12 10 10 42 22 5 5 5 5 6 25 8 26 37 29 6 13 20 6 6 9 6 9 22 18 8 9 20 29 8 17 8 4 4 4 6 23 7 23 26 26 11 28 5 14 9 12 5 24 12 18 7 10 9 16 10 9 7 3 8 18 8 8 7 3 3 2 6 11 14 17 28 19 6 9 7 21 10 6 8 17 6 5 14 5 13 4 19 7 5 7 19 5 5 10 4 9 11 3 3 4 3 4 3 5 4 10 14 2 5 20 5 12 10 7 12 4 11 2 1 1 9 6 15 7 6 5 5 10 18 9 5 7 6 9 8 3 3 27 6 20 7 8 12 1 3 7 15 5 4 4 4 17 5 3 6 5 7 5 6 4 6 5 12 8 15 6 6 4 2 4 11 5 6 4 3 4 14	Open. Hide. 61 55 45 19 13 19 12 16 17 22 28 36 55 55 55 59 59 61 61 61 61 61 61 61 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 44 35 30 35 55 59 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 55 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 57 57 57 53 47 57 53 57 53 53 57 57 47 43 57 57 53 53 57 53 57 53 57 57 50 57 53 53 57 57 53 57 53 53 57 57 53 50 53 57 57 53 57 57 57 47 38 57 57 57 57 53 53 57 53 57 53 52 53 57 53 50 47 47 53 57 47 57 53 57 50 52 53 50 57 47 50 18 37 34 38 52 47 47 53 50 47 47 47 53 50 52 41 46 45 53 53 45 53 50 24 37 41 30 47 52 53 52 57 57 53 57 43 34 43 38 30 57 50 53 45 50 50 57 36 28 57 53 53 50 53 50 53 52 28 52 53 53 53 52 52 52 24 38 31 53 39 53 57 57 53 34 52 53 46 52 39 52 52 53 53 38 36 53 47 41 33 50 40 37 52 21 46 46 37 31 42 57 37 19 37 12 37 38 57 57 33 25 41 31 53 44 53 31 53 24 37 52 14 57 52 27 57 31 48 57 20 23 12 53 53 44 45 30 37 27 53 53 40 28 41 37 31 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 17 28 37 28 41 47 29 32 30 28 44 30 32 39 13 46 21 18 28 39 29 21 29 48 29 32 24 51 46 23 32 48 29 46 30 30 35 32 27 29 29 29 23 32 29 16 48 28 22 14 18 5 29 22 38 28 31 15 23 15 21 30 19 37 18 20 27 45 45 28 23 10 24 30 32 47 33 18 18 27 21 21 24 34 32 25 43 18 29 32 24 20 7 51 46 16 29 28 14 12 6 6 12 25 23 16 27 24 28 13 28 29 4 10 17 31 29 30 14 29 22 27 27 29 38 46 27 23 16 18 23 46 20 18 26 11 14 14 11 5 36 16 21 10 11 24 26 43 27 11 28 34 17 7 17 10 12 29 14 5 10 17 9 26 23 28 51 23 14 14 51 26 24 23 13 9 13 16 25 27 28 13 14 16 25 10 28 21 20 7 22 20 12 9 6 26 46 14 18 8 8 24 5 5 21 11 10 33 6 18 19 8 7 10 6 28 35 22 20 29 19 15 12 12 29 20 33 34 51 51 51 34 22 29 17 12 28 22 10 6 6 26 7 10 19 21 17 20 5 10 11 28 29 12 19 7 9 6 4 4 6 10 10 9 6 10 5 10 15 14 19 27 19 9 12 44 44 22 15 14 8 21 15 23 12 8 5 6 6 35 33 11 9 24 15 25 33 15 14 14 10 6 10 4 3 3 4 4 14 15 22 26 24 12 27 9 10 8 21 42 10 15 8 10 9 23 9 17 5 10 7 13 17 11 1 3 12 11 29 22 26 22 10 18 17 34 16 9 11 6 5 6 17 16 15 21 12 4 2 3 7 24 30 36 10 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_17350799_17351934
seq2: B6Ng01-119O08.g_68_1208

seq1  GAATTCATCTTATCTTTGTATTTTCGTTCTTCCTTTCTCTGTAGCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTATCTTTGTATTTTCGTTCTTCCTTTCTCTGTAGCTTTGT  50

seq1  ACTGATTTGTACTTATGGCTCAAAATCCTTTGCTAGTCACTGTGTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTGTACTTATGGCTCAAAATCCTTTGCTAGTCACTGTGTTTAAA  100

seq1  GCTTACAACTGAAAAGGCATCATGGTGATTAAGAAACAAGACTCTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAACTGAAAAGGCATCATGGTGATTAAGAAACAAGACTCTTTTAA  150

seq1  AAGAGTCTTCTCTGAAATATTTTGTTTGAAAACATGAATTAGCACCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTTCTCTGAAATATTTTGTTTGAAAACATGAATTAGCACCTGCT  200

seq1  TTAAACACTCATCATTGAAGGGAAAATTATATAGATCACATAAACTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACTCATCATTGAAGGGAAAATTATATAGATCACATAAACTTCCA  250

seq1  AAATATCAAAATCAACATCAAAGATTAATTAGATTTTAAAATGATATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAAAATCAACATCAAAGATTAATTAGATTTTAAAATGATATTGT  300

seq1  GAGTAATTATGTAGATTTTTATTTTTGTTGTAATATTTAGAAAAGGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTATGTAGATTTTTATTTTTGTTGTAATATTTAGAAAAGGCTGT  350

seq1  AGTAATTTTATGTTCTATTCATTTTGTTTTGGGGGTTTTATTTATAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTTATGTTCTATTCATTTTGTTTTGGGGGTTTTATTTATAAATA  400

seq1  TATTTTTTTATTTACATTTTATATGACATGCTGGCCACCCCTCAGAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTATTTACATTTTATATGACATGCTGGCCACCCCTCAGAAACT  450

seq1  TTCCAAAGTTGTGGTCTGAAAATATGAAAGTTAGGTATATATTTGAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGTTGTGGTCTGAAAATATGAAAGTTAGGTATATATTTGAGGAC  500

seq1  AATCTCTGCTTTTTCTGACCTTACCTTAAATATCTCGGAAATGCAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCTTTTTCTGACCTTACCTTAAATATCTCGGAAATGCAGTGTC  550

seq1  AAACAGTGTGAGAGCCCATGTGTCACTGTTGGACTTTCTCTTGGTTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGTGAGAGCCCATGTGTCACTGTTGGACTTTCTCTTGGTTCCTA  600

seq1  CTGCCTTTAATGGAGGTACTTTCCCCGTGAACTCTAAGGATATATTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTAATGGAGGTACTTTCCCCGTGAACTCTAAGGATATATTTTGT  650

seq1  GCTAATCTATGGTTTAACTTCAATTCTGAGGCTGAAAAGAAACTGAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTATGGTTTAACTTCAATTCTGAGGCTGAAAAGAAACTGAAAAC  700

seq1  CCCACAGAGTTTATTGTAGGTTTTAAGAAACCAGAGGAGAGAAACAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGAGTTTATTGTAGGTTTTAAGAAACCAGAGGAGAGAAACAAAAA  750

seq1  GAGGGGCTC-AAAAAAAAAAAAAAAATCACCATAACCTAGGACTGACTGA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCTCAAAAAAAAAAAAAAAAATCACCATAACCTAGGACTGACTGA  800

seq1  CTTTGAAGTTGCTAGTCTAAGTTACC-TTGCAGAATGTGTCTTTTAGTCA  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTTGAAGTTGCTAGTCTAAGTTACCTTTGCAGAATGTGTCTTTTAGTCA  850

seq1  AAGTCTATAATGTGCTC-TTTCCTC-TGTCTATCTTCACAAGGCAGTTCA  896
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  AAGTCTATAATGTGCTCTTTTCCTCTTGTCTATCTTCACAAGGCAGTTCA  900

seq1  AACTATTTACCACC-TTGAGTAAACCTCTCCAAT-ACATATTTCTTTGCT  944
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  AACTATTTACCACCTTTGAGTAAACCTCTCCAATAACATATTTCTTTGCT  950

seq1  -GCTGAAATCACTGTCATG-TTTGTGATAACTGTG-AGAGAACTTATGTT  991
       |||||||||||||||||| |||||||| |||||| | ||||||||||||
seq2  GGCTGAAATCACTGTCATGTTTTGTGATTACTGTGAAAAGAACTTATGTT  1000

seq1  ACTTTTTACATAGTCACAGCCTAGACCCTGTA-TGTAATAGGCACTAACA  1040
      |||||||||||||||||||||||||||||||| | ||||| |||||||||
seq2  ACTTTTTACATAGTCACAGCCTAGACCCTGTATTTTAATA-GCACTAACA  1049

seq1  TTTTGAGATGGTTACTTT-AGGCCATGATGTGTTGTAGCTGCTTCTTAAA  1089
      ||||||||||| |||||| |||||||||||| |||||||||| |||||||
seq2  TTTTGAGATGG-TACTTTAAGGCCATGATGT-TTGTAGCTGC-TCTTAAA  1096

seq1  TTATAAGAGCTTGGTCTTGCAAACTTTATATGCCTCAGTATGGGGGA  1136
       ||||||||||||||||||||| |||||  ||||||||| |||||||
seq2  -TATAAGAGCTTGGTCTTGCAACCTTTAATTGCCTCAGT-TGGGGGA  1141

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information