BAC Information

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BAC

Clone NameB6Ng01-120L23
Chromosome3 (Build37)
Map Location 114,075,534 - 114,076,710
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3, Col11a1
Downstream geneLOC100043220, Olfm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L23.bB6Ng01-120L23.g
ACCDH924611DH924612
length1,1791,137
definitionDH924611|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L23, 5' end.DH924612|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacatttctaatataaatattctattaaatatcaattagatta
tcataaaaatgtttgttctctgtatccataaccagaatgatactaactat
atagattcagtgtctcttaatatgtgcaggacatgtacctgaaaagttag
atagcaacattctgctaattctctgagaaagctgagagaaagattcacaa
ataactataacactattagtgaaaacaccttcagtttggaatccttccta
cctctcagatgaaactatcatgttgactgtgttgatcatcctcaaggaga
tgttcttgattgagactgtctttacagtgaaggaaggcatattgagaaat
gtttcaggttgtttcaggagtcagtacatgacagaaatatgattttgaca
ctaggtttgttggatcttgtagatcacatttgtagtaactataatgaagt
atccactacgttttaactacctaaatatgtaaaggaatatacaaatagta
tgccttaaataatttaagaaattcatggggtatgtaattagtcttataaa
actatattgttataaaatgaattgttttttaattgataagtgttatctag
aagtaaaagtacagaaatttactgttggttgtagcaggtagaagtagagt
acaaataaaggaatatgtggttggctgaatgtgttttgtattggtcatgt
tgaatttaagattgctttacaacactgtaataaaagaaattgataagagg
aaagtagggaagtctgactatcagatagtaatggaaagtagaagttaatt
gagccttggtttgtgagccattatcatggaaactaatgggaaactattga
gaagtaataaagttgataaatttgtcataatactataagaagaatacaga
taaacttaacctttattgctttaacttcagaactgaagtcatattcaatg
gttaaaggttcaaatgtaaagtgagcattcatattctgaaaatattatta
aatctaaaaaaaatggaactcaaaggaaaagatcgtcatcgtaatgttta
attgtaaaataagtgtggaaatatttaccaccaataaattgactttatcg
gaaacagatcaagaataatcttctggattattcaagggtaaggttattgt
gaaaaatattctccacctggttttataca
gaattctttagctctgtaccccatttttaatggggttatttgagtttctg
gagtcctgctttttgagctctttgtatatattggatattagtcccttatc
atatttaggattggtaaaaatcctttcccaatctgttggtggcctttttg
tcttattgacagtgtcttttgccttacagaagctttgaaattttatgagg
tcccatttgtcaattcttgatattacagcacaagccattactgttctgtt
taggaattttttcccctgtgcccatatcttcgaggcttttccccactttc
tcctctattaatttcagtgtctctggttttatgtggaggtctttgatcca
cttagacttgagctttgtataaggaggtaagaatggatcaattcgccttc
ttctattcaaagacttacatttattgtcatatatgtttttcaattgcttt
gtaagagttacactaagatattttatttatatcatttgttcctattgaga
actgtattgtttctctgattttgtttttcagtctgtttataatttatgta
tatgagggctactgattattttgtgttaatttgtaccctgtcacttctct
gaaggtgtttttcagctgtagttgttccctggtagaagttaatacaaacc
tatcatctgaaaagagtggtattgtgaattcttcctttccaaatttttcc
ccttgatctcctttagttgtcttttttgttcttattaaatttgagtgcta
tattgagtaaaatggagagggtggcaagccttgtcttattcctgatttta
gtaaaattgctttaagtttctctccatttaatgtgattttggctgggctg
tatgttgcttttaatatatttaggtatatccctttttattcttgatcttc
ttcaagacatttgccataaaggacagctggattttatcaaaagagttttc
ttcatctgatgagaatgtgtttttttttttttttgttgttggtgttcttt
caagtttatttatatggggaattatgttggacagattttcttatggttga
ttcattcctgcacttatgaaatagaggccaatggatttaggtgaagacct
tttaatggcgtattgaccactcttgaatacgaacggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114075534_114076710
seq2: B6Ng01-120L23.b_47_1225

seq1  GAATTCTCACATTTCTAATATAAATATTCTATTAAATATCAATTAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACATTTCTAATATAAATATTCTATTAAATATCAATTAGATTA  50

seq1  TCATAAAAATGTTTGTTCTCTGTATCCATAACCAGAATGATACTAACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAATGTTTGTTCTCTGTATCCATAACCAGAATGATACTAACTAT  100

seq1  ATAGATTCAGTGTCTCTTAATATGTGCAGGACATGTACCTGAAAAGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTCAGTGTCTCTTAATATGTGCAGGACATGTACCTGAAAAGTTAG  150

seq1  ATAGCAACATTCTGCTAATTCTCTGAGAAAGCTGAGAGAAAGATTCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAACATTCTGCTAATTCTCTGAGAAAGCTGAGAGAAAGATTCACAA  200

seq1  ATAACTATAACACTATTAGTGAAAACACCTTCAGTTTGGAATCCTTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATAACACTATTAGTGAAAACACCTTCAGTTTGGAATCCTTCCTA  250

seq1  CCTCTCAGATGAAACTATCATGTTGACTGTGTTGATCATCCTCAAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGATGAAACTATCATGTTGACTGTGTTGATCATCCTCAAGGAGA  300

seq1  TGTTCTTGATTGAGACTGTCTTTACAGTGAAGGAAGGCATATTGAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGATTGAGACTGTCTTTACAGTGAAGGAAGGCATATTGAGAAAT  350

seq1  GTTTCAGGTTGTTTCAGGAGTCAGTACATGACAGAAATATGATTTTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGTTGTTTCAGGAGTCAGTACATGACAGAAATATGATTTTGACA  400

seq1  CTAGGTTTGTTGGATCTTGTAGATCACATTTGTAGTAACTATAATGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTGTTGGATCTTGTAGATCACATTTGTAGTAACTATAATGAAGT  450

seq1  ATCCACTACGTTTTAACTACCTAAATATGTAAAGGAATATACAAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTACGTTTTAACTACCTAAATATGTAAAGGAATATACAAATAGTA  500

seq1  TGCCTTAAATAATTTAAGAAATTCATGGGGTATGTAATTAGTCTTATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAAATAATTTAAGAAATTCATGGGGTATGTAATTAGTCTTATAAA  550

seq1  ACTATATTGTTATAAAATGAATTGTTTTTTAATTGATAAGTGTTATCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATTGTTATAAAATGAATTGTTTTTTAATTGATAAGTGTTATCTAG  600

seq1  AAGTAAAAGTACAGAAATTTACTGTTGGTTGTAGCAGGTAGAAGTAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGTACAGAAATTTACTGTTGGTTGTAGCAGGTAGAAGTAGAGT  650

seq1  ACAAATAAAGGAATATGTGGTTGGCTGAATGTGTTTTGTATTGGTCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAGGAATATGTGGTTGGCTGAATGTGTTTTGTATTGGTCATGT  700

seq1  TGAATTTAAGATTGCTTTACAACACTGTAATAAAAGAAATTGATAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTAAGATTGCTTTACAACACTGTAATAAAAGAAATTGATAAGAGG  750

seq1  AAAGTAGGGAAGTCTGACTATCAGATAGTAATGGAAAGTAGAAGTTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGGAAGTCTGACTATCAGATAGTAATGGAAAGTAGAAGTTAATT  800

seq1  GAGCCTTGGTTTGTGAGCCATTATCATGGAAACTAATGGGAAACTATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTGGTTTGTGAGCCATTATCATGGAAACTAATGGGAAACTATTGA  850

seq1  GAAGTAATAAAGTTGATAAATTTGTCATAATACTATAAGAAGAATACAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATAAAGTTGATAAATTTGTCATAATACTATAAGAAGAATACAGA  900

seq1  TAAACTTAACCTTTATTGCTTTAACTTCAAGAACTGAAGTCATATTCAAT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAACTTAACCTTTATTGCTTTAACTTC-AGAACTGAAGTCATATTCAAT  949

seq1  GGTTAAAGGTTCAAATGTAAAGTGAGCATTCATATTCTGAAAATATTATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGGTTCAAATGTAAAGTGAGCATTCATATTCTGAAAATATTATT  999

seq1  AAATCTAAAAAAAATGGAACTCAGAGGAAAAGAATCGTCATCGTAATGTT  1050
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  AAATCTAAAAAAAATGGAACTCAAAGGAAAAG-ATCGTCATCGTAATGTT  1048

seq1  TAA-TGT-AAATAAGTGTTGAAATATTACCAACCAATAAATTTGAC-TTA  1097
      ||| ||| |||||||||| ||||||||  | ||||||||| ||||| |||
seq2  TAATTGTAAAATAAGTGTGGAAATATTTACCACCAATAAA-TTGACTTTA  1097

seq1  TCGAAACAAGAATCAAGAATAATCTTCTTGATTATTCAA-GGTAAAGTTT  1146
      ||| ||  || ||||||||||||||||| |||||||||| ||||| ||| 
seq2  TCGGAAACAG-ATCAAGAATAATCTTCTGGATTATTCAAGGGTAAGGTTA  1146

seq1  ATGTGAAAAATATTCT-CACCT-GTTTTATACA  1177
       ||||||||||||||| ||||| ||||||||||
seq2  TTGTGAAAAATATTCTCCACCTGGTTTTATACA  1179