BAC Information

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BAC

Clone NameB6Ng01-120O23
Chromosome3 (Build37)
Map Location 137,276,162 - 137,276,831
singlet/doubletsinglet
Overlap genenone
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862
Downstream geneDdit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O23.bB6Ng01-120O23.g
ACCDH924747DH924748
length9851,117
definitionDH924747|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O23, 5' end.DH924748|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccattacgtaactcacaaccatctctaactcttgattaagtggg
atctgacaccctattctgacctccttaagcacctatacacatgtgagaga
tgtatgtctgtctgcctgtctgcctgtctctatctatctatctatctatc
tatctatctatctatctatctatctatctaccatctatctacctatcttc
atatggagacttataagagagaattggctcactagattacagaagctgaa
aagtcccacaaaataccatctggatctcagagaaccagcaaatctggcag
tgtatttcactgtgaatctacagtcccaagaatcacagagattgatgttg
taagtctcagattggggctaaagctctgagaatctggagtggtgatgggc
aacagcatatagctggcccaactccatgaatgagagaatttatctatctt
ccttccaccattttattcaattttgattcaatacatactgtattaccact
gatcacattaatgagactggattttttctatcaattcaaatgctaatagc
ctctggatatagatcccacaatcatgtttcactagctacatgagaatcct
ttagttcattctagttgatataccattgacagcatagttgctcagagcag
ctgtacttgaaaaaatgtaccatagataaacagcagctcacatcttcagt
gatgcatccactgtgacttctttggaaacatcataaaaggtgtttcagta
ttgaataaaaagagagtctagcacagcattggccagagtagggaagatgg
gcagataattctatcatttcactaagaagctgttagtatctgatagttgc
ctggagagaagagccagtattctgtcagacgggatccctggtggtaaacc
ccatgcccagggagtgtgcatcataaactaacaaaagttaccttagagtt
gggtgggcttgtggaaggaggtggggaaataggaa
gaattctcacctgaggaataccgagtggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacattgtactaccggaggatccagcaatacttctcctgggc
atatatccagaagatgccccaattggtaagaaggacacatgctccactat
gttcatagcagccttatttataaaagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctatacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatacctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgctcctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttatcgaaa
ggacccagatgtaactatctcttgtgagactatgcaggggcctagcaaac
acagaattggatgctcacagccagctaatggatggatcacaggctcccaa
tggaggagctaaagaaagaacccaaggagcttaaagagatctgcaaccct
attagttggacaacattatggactaaccagtaccccgggctctggactct
agctgcatatgtatctaaaatgccctatcgcgccctcactgggaagagag
gccattggaatccaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137276162_137276831
seq2: B6Ng01-120O23.b_364_1035 (reverse)

seq1  TTCCTATT--CCCACCTCC-TCCACAAGCCCACCCAACTCTAAGGTAACT  47
      ||||||||  ||||||||| ||||||||||||||||||||||||||||||
seq2  TTCCTATTTCCCCACCTCCTTCCACAAGCCCACCCAACTCTAAGGTAACT  50

seq1  TTTGTTAGTTTATGATGCACACTCCCTGGGCATGGGGTTTACCACCAGGG  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGTTTATGATGCACACTCCCTGGGCATGGGGTTTACCACCAGGG  100

seq1  ATCCCGTCCTGACAGAATACTGGCTCTTCTCTCCAGGCAACTATCAGATA  147
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGT-CTGACAGAATACTGGCTCTTCTCTCCAGGCAACTATCAGATA  149

seq1  CTAACAGCTTCTTAGTGAAATGATAGAATTATCTGCCCATCTTCCCTACT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGCTTCTTAGTGAAATGATAGAATTATCTGCCCATCTTCCCTACT  199

seq1  CTGGCCAATGCTGTGCTAGACTCTCTTTTTATTCAATACTGAAACACCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAATGCTGTGCTAGACTCTCTTTTTATTCAATACTGAAACACCTT  249

seq1  TTATGATGTTTCCAAAGAAGTCACAGTGGATGCATCACTGAAGATGTGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGTTTCCAAAGAAGTCACAGTGGATGCATCACTGAAGATGTGAG  299

seq1  CTGCTGTTTATCTATGGTACATTTTTTCAAGTACAGCTGCTCTGAGCAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTTATCTATGGTACATTTTTTCAAGTACAGCTGCTCTGAGCAAC  349

seq1  TATGCTGTCAATGGTATATCAACTAGAATGAACTAAAGGATTCTCATGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGTCAATGGTATATCAACTAGAATGAACTAAAGGATTCTCATGTA  399

seq1  GCTAGTGAAACATGATTGTGGGATCTATATCCAGAGGCTATTAGCATTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGAAACATGATTGTGGGATCTATATCCAGAGGCTATTAGCATTTG  449

seq1  AATTGATAGAAAAAATCCAGTCTCATTAATGTGATCAGTGGTAATACAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAGAAAAAATCCAGTCTCATTAATGTGATCAGTGGTAATACAGT  499

seq1  ATGTATTGAATCAAAATTGAATAAAATGGTGGAAGGAAGATAGATAAATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGAATCAAAATTGAATAAAATGGTGGAAGGAAGATAGATAAATT  549

seq1  CTCTCATTCATGGAGTTGGGCCAGCTATATGCTGTTGCCCATCACCACTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTCATGGAGTTGGGCCAGCTATATGCTGTTGCCCATCACCACTC  599

seq1  CAGATTCTCAGAGCTTTAGCCCCAATCTGAGACTTACAACATCAATCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTCAGAGCTTTAGCCCCAATCTGAGACTTACAACATCAATCTCT  649

seq1  GTGATTCTTGGGACTGTAGATTC  670
      |||||||||||||||||||||||
seq2  GTGATTCTTGGGACTGTAGATTC  672