BAC Information

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BAC

Clone NameB6Ng01-121P07
Chromosome4 (Build37)3 (Build37)
Map Location 72,032,676 - 72,033,86014,577,320 - 14,577,837
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039979, LOC667638, EG667649, Tle1
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121P07.bB6Ng01-121P07.g
ACCDH925507DH925508
length1,151952
definitionDH925507|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P07, 5' end.DH925508|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(72,032,676 - 72,033,860)(14,577,320 - 14,577,837)
sequence
gaattctggccatacctttcccaccaacaaagaccacagacgtgcttgag
cctggtgttatcagtatgcataaacttgtcatcaaaccaacatgcttaat
ggtaaaatgaacatatacccagtctaccctgctgtgcttgagggcagtag
tgtatgtccatattgagcacccaataaatagcaagtgaaaaaattaacat
gatataatacagataaaatgttgcaccatttctcttttacagttttattc
tatctgtaaaatatattaaatatggactagtaggttcacatttccttctg
taataattgggagtataaaatgagatagaagctttgtagaaacacatgta
atacaataaccaatacctttctagttttctttgtgtttctaatgatatat
atgataaaagtattttttctccctctttcttctgatatcagaaggattac
ctctttgcagtctgaagtataatgatgctttagttttctttcatttacta
attaaatgaaatcttatttatctgattttgccactttggattttcttttt
ttatgttgtcccatatgcaatattctcaggtggggaaacaaaccagtact
ttattctatttaactgccacttagcagttaagagaatggatgtttcatag
gatactgctatatctcttcctattaatgaatatgtagcctttgtccagtt
tatgatactgtcaccagtagtgacacatgacacaacaatgtgagaattct
gttatagacatggcacatgtttcttaaatgtcttgttttaatttaagagc
tgctgctataaagactgtttatatttccactatggttcagctaaaacttc
atttccctttcgccacactggcgattctcaatatataaatttttgttaat
ttggtgctgttccttttctagaaaaatgcatgtattctatgtttctggga
tttgttttttatatttttacatgaaatttttcataaaatatattttagtc
atattatttcttccacactctcccaaattcttcatatatccctactggcc
tctacatgcctcatgcgcgcgccaccatcactatcgatgaaaaattgaaa
tgaaaagaatcaatagacaaattaacaaccagccaacagagagaagcatt
g
gaattcagtgctaaggaagtctacagaagagagaatctgtcagttataca
tctgaaagaggattaatgcccagaaaatatagagaactcaaaaacaaaga
atcataaaaaccaatgactgatccaaaaaagtagacctgggacctgaaca
gagggtttttaaaagaataagtaaacatgactaagaaatattgtaaaaaa
aaaaaaaagttcattatctccaggaattagaaaaatgcaaaccaaaagaa
ctttgaaatttcatctttccccaatcagcatgaccaaacccaacaaaaca
actgacaacaaatgctggagaagatgtgagggaagtggaactcttattca
ctcttgatgagattacaaactagtctagacactttggaaagcagtgtgga
gatacctcaaaaggctaaacataagtgcaccaaaggacctagctcttacc
actacttcctgaaggactcatcaacttggtctacagatacttgctcaacc
atgatggctgttgctcaattcacaatagctaggaaatggaaacaacctac
aagtccttcaactgatgaatagataatgaaaatgtgctacataaacacta
tgcaatactgtttagccacaaagaaaataaaaacatgaactttgcaggtg
aatggatgcaactagaaatgatcatattaaatgaagtaattcagaaacag
aaataaaagaaaaattgcctgggtttttttttattttttgttttgtttgt
ttttttgttttttttttttttcccatctgaggttctgaactccaaatttt
cagatttgagtatgttatctggaataactgcagaaaccaggaaagtaaac
agagactgttgcttggggggaggaaaatggggataggagaaataaagagg
gggagagcagggtacatgtgatcttaagaggcatgtaggaaaacagggga
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72032676_72033860
seq2: B6Ng01-121P07.b_48_1198 (reverse)

seq1  CAATGCTTTCTCTCTGTGTTTGAGCTTTTGTTTTGTTAATTTTTGTCTTA  50
      |||||| |||||||||   ||| |||      |||||||  |||||| ||
seq2  CAATGC-TTCTCTCTG---TTG-GCT----GGTTGTTAA--TTTGTC-TA  38

seq1  TTGATTTTCTTTTTTCTATTTTATATTTTTTTCCTTTGTGTGTGTGTGTG  100
      ||||  |||||||    |||| |  ||||  ||  | |||   |||    
seq2  TTGA--TTCTTTT---CATTTCAATTTTTCATCGATAGTGATGGTG----  79

seq1  TGTGTGCGCGCGCATGTGTGCATGTAGAGGCCAGTAGGGATATATGAAGA  150
           ||||||||||| | |||||||||||||||||||||||||||||||
seq2  -----GCGCGCGCATGAG-GCATGTAGAGGCCAGTAGGGATATATGAAGA  123

seq1  ATTTGGGAGGAGTTGTGGGAAGAAATAATATGACTAAAATATATTTTATG  200
      |||||||| ||| ||| |||||||||||||||||||||||||||||||||
seq2  ATTTGGGA-GAG-TGT-GGAAGAAATAATATGACTAAAATATATTTTATG  170

seq1  AAAAATTTCATGTTAAAAATATTAAAAAACAAATCCCAGAAACATAGAAT  250
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  AAAAATTTCATG-TAAAAATA-TAAAAAACAAATCCCAGAAACATAGAAT  218

seq1  ACATGCATTTTTCTAGAAAAGGAACAGCACCAAATTAACAAAAATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATTTTTCTAGAAAAGGAACAGCACCAAATTAACAAAAATTTATA  268

seq1  TATTTGAGAATCGCCAGTGTGGCGAAAGGGAAATGAAGTTTTAGCCTGAA  350
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TA-TTGAGAATCGCCAGTGTGGCGAAAGGGAAATGAAGTTTTAG-CTGAA  316

seq1  CCATAGTGGAAATATAAACAGTCTTTATAGCAGCAGCTCTTAAATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTGGAAATATAAACAGTCTTTATAGCAGCAGCTCTTAAATTAAAA  366

seq1  CAAGACATTTAAGAAACATGTGCCATGTCTATAACAGAATTCTCACATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACATTTAAGAAACATGTGCCATGTCTATAACAGAATTCTCACATTG  416

seq1  TTGTGTCATGTGTCACTACTGGTGACAGTATCATAAACTGGACAAAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCATGTGTCACTACTGGTGACAGTATCATAAACTGGACAAAGGCT  466

seq1  ACATATTCATTAATAGGAAGAGATATAGCAGTATCCTATGAAACATCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCATTAATAGGAAGAGATATAGCAGTATCCTATGAAACATCCAT  516

seq1  TCTCTTAACTGCTAAGTGGCAGTTAAATAGAATAAAGTACTGGTTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAACTGCTAAGTGGCAGTTAAATAGAATAAAGTACTGGTTTGTTT  566

seq1  CCCCACCTGAGAATATTGCATATGGGACAACATAAAAAAAGAAAATCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTGAGAATATTGCATATGGGACAACATAAAAAAAGAAAATCCAA  616

seq1  AGTGGCAAAATCAGATAAATAAGATTTCATTTAATTAGTAAATGAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAAAATCAGATAAATAAGATTTCATTTAATTAGTAAATGAAAGAA  666

seq1  AACTAAAGCATCATTATACTTCAGACTGCAAAGAGGTAATCCTTCTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGCATCATTATACTTCAGACTGCAAAGAGGTAATCCTTCTGATA  716

seq1  TCAGAAGAAAGAGGGAGAAAAAATACTTTTATCATATATATCATTAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAAAGAGGGAGAAAAAATACTTTTATCATATATATCATTAGAAA  766

seq1  CACAAAGAAAACTAGAAAGGTATTGGTTATTGTATTACATGTGTTTCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGAAAACTAGAAAGGTATTGGTTATTGTATTACATGTGTTTCTAC  816

seq1  AAAGCTTCTATCTCATTTTATACTCCCAATTATTACAGAAGGAAATGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTATCTCATTTTATACTCCCAATTATTACAGAAGGAAATGTGA  866

seq1  ACCTACTAGTCCATATTTAATATATTTTACAGATAGAATAAAACTGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTAGTCCATATTTAATATATTTTACAGATAGAATAAAACTGTAAA  916

seq1  AGAGAAATGGTGCAACATTTTATCTGTATTATATCATGTTAATTTTTTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGGTGCAACATTTTATCTGTATTATATCATGTTAATTTTTTCA  966

seq1  CTTGCTATTTATTGGGTGCTCAATATGGACATACACTACTGCCCTCAAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATTTATTGGGTGCTCAATATGGACATACACTACTGCCCTCAAGC  1016

seq1  ACAGCAGGGTAGACTGGGTATATGTTCATTTTACCATTAAGCATGTTGGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGGTAGACTGGGTATATGTTCATTTTACCATTAAGCATGTTGGT  1066

seq1  TTGATGACAAGTTTATGCATACTGATAACACCAGGCTCAAGCACGTCTGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGACAAGTTTATGCATACTGATAACACCAGGCTCAAGCACGTCTGT  1116

seq1  GGTCTTTGTTGGTGGGAAAGGTATGGCCAGAATTC  1185
      |||||||||||||||||||||||||||||||||||
seq2  GGTCTTTGTTGGTGGGAAAGGTATGGCCAGAATTC  1151

seq1: chr3_14577320_14577837
seq2: B6Ng01-121P07.g_584_834

seq1  ATTCATAATAGCCGGAAACTGGAAACAACCTAC-ATTCCCTCAATCGAAC  49
      ||||| ||||||  | || |||||||||||||| | ||| ||||  ||  
seq2  ATTCACAATAGCTAGGAAATGGAAACAACCTACAAGTCCTTCAACTGATG  50

seq1  AATGGATTTAAAGATAAAATAAGTGGTACATTATCACAATGGAGTATTAC  99
      ||| ||  ||| |  |||||  ||| ||||| | ||| ||| | ||    
seq2  AATAGA--TAATG--AAAAT--GTGCTACATAAACACTATGCAATA----  90

seq1  TCGGTTGTTTA---AAAAAAAAAATGACATCATGAAATATACTGGCAAAT  146
           ||||||   | ||| ||||| | | |||||| | | | ||  |||
seq2  ----CTGTTTAGCCACAAAGAAAATAAAAACATGAACTTTGCAGGTGAAT  136

seq1  TGATGGAACTCAAAAACCTCATCCTGAGTGAAGTAACCCAAACTCAG---  193
       |||| ||||  |||   ||||  | | ||||||||  || |  |||   
seq2  GGATGCAACTAGAAATGATCATATTAAATGAAGTAATTCAGAAACAGAAA  186

seq1  --AAAGATGAA---CATGG-------TACATACTCACTTATAAGTGGATC  231
        |||||  ||   | |||       |  ||  |   || |   ||  | 
seq2  TAAAAGAAAAATTGCCTGGGTTTTTTTTTATTTTTTGTTTTGTTTGTTTT  236

seq1  TTAGCTGTAAAGTAAACATAATGCTACAATCCCCAGACCCAGAAAGACTA  281
      || | | |    |                                     
seq2  TTTGTTTTTTTTTTT-----------------------------------  251

seq1  AGTAACAAGACAGGCTAAAGAGGGTATCTCTCTGGAAAGGGTCAGTGGAA  331
                                                        
seq2  --------------------------------------------------  251

seq1  TAGAATCTGCAGGTGGATTGGGGGGGCAGACGGGGATTTTAAGTGTTGCA  381
                                                        
seq2  --------------------------------------------------  251

seq1  GCTCTGAAGGAAAATGCTTCCCCTACAGAAGTTTTGCTCCAGACGCCTGG  431
                                                        
seq2  --------------------------------------------------  251

seq1  AAAAATTTTGGTTTAAAATTGTTTTCAGGATTTACTAGTTAATGCTGTCA  481
                                                        
seq2  --------------------------------------------------  251

seq1  GTTTCTCCTCGCGTTTTGTTTTTTTGTTTTTTTTTTT  518
                                           
seq2  -------------------------------------  251