BAC Information

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BAC

Clone NameB6Ng01-121P10
Chromosome3 (Build37)
Map Location 67,460,223 - 67,461,181
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625115, Shox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG208426, EG545531, LOC631379, Schip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121P10.bB6Ng01-121P10.g
ACCDH925513DH925514
length9581,161
definitionDH925513|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P10, 5' end.DH925514|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagattccttagtgaacatggtgctatttctttctggttgaaa
gtagaaaaaaaaagtgatcttcatacttgtagctatcgcaaaaggaagca
tatcgtttttgctgttgcagttgaaagtgttaacttcatatgtatgtatt
actcatagaataatctgggtcttccacttttcccaacagaaacacaggaa
gacagagacaatgagctgtggtggtatcctgaaagtcagaatggaatcat
gaacccaggaatccaaaatcctgtagtctgcactgagaatgcttaaataa
tttattgatataattatttctccaggacacaactctaggattagatggta
attctatttgacttacataaaggggaattattactgcagttacctttaaa
gagctctctgggtttgctgggagtatctgaattaacagtaaattgaggcc
cattacatattaatgggtcagctgatttattggtggtgttagctggcaat
tagccatcctgcacagtgtcttctgttggggcattactttctcactattg
agtgccagctcagggatgagcaccttgaaaccagtggggtattctccctg
tcaatctaatagggccttgcatcatctttaatggtgagtttatggtctgt
cctgaaggatatttggacacacttaatatcttttggatgacaaccattgg
aaagcataaatgaaagtacatgtttgtcatttgagccactaaaaatttta
cccagtcaccagatagcccattatggtgtatggattgctttggatatttc
tcttatttttttatattataaattcccttttagttctgtggcacttatag
gacgtttttctatgagtcagctgtagcacaggatgttatggcccacagta
ttattggaagagttacttttggggtgtctaatttgttctcaagagaaaaa
gatatatt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttatccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tctttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgttttcacttggttgatttcacccctgagtttgatta
tttcctgccgtctactctcttgggtgaatttgcttccttttttttctaga
gctttagatgtgtgtcaagctgctagtatgtgctctctcccgttttttct
gaagcactcatagctatgagttccctctagaaatgctttcattgtgtccc
aaagtttgggtatgtgtggcttcatttcattaactctaaaagtcttaatc
ttcttattccttcctgacaagtatccatggaagagggttgtccagttaca
tgtgtagttgctttcggtatttttggtatgagagacagctctatggcagg
tgatacgtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67460223_67461181
seq2: B6Ng01-121P10.b_47_1004

seq1  GAATTCTTAGATTCCTTAGTGAACATGGTGCTATTTCTTTCTGGTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGATTCCTTAGTGAACATGGTGCTATTTCTTTCTGGTTGAAA  50

seq1  GTAGAAAAAAAAAGTGATCTTCATACTTGTAGCTATCGCAAAAGGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAAAAAAGTGATCTTCATACTTGTAGCTATCGCAAAAGGAAGCA  100

seq1  TATCGTTTTTGCTGTTGCAGTTGAAAGTGTTAACTTCATATGTATGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGTTTTTGCTGTTGCAGTTGAAAGTGTTAACTTCATATGTATGTATT  150

seq1  ACTCATAGAATAATCTGGGTCTTCCACTTTTCCCAACAGAAACACAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAGAATAATCTGGGTCTTCCACTTTTCCCAACAGAAACACAGGAA  200

seq1  GACAGAGACAATGAGCTGTGGTGGTATCCTGAAAGTCAGAATGGAATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAATGAGCTGTGGTGGTATCCTGAAAGTCAGAATGGAATCAT  250

seq1  GAACCCAGGAATCCAAAATCCTGTAGTCTGCACTGAGAATGCTTAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGGAATCCAAAATCCTGTAGTCTGCACTGAGAATGCTTAAATAA  300

seq1  TTTATTGATATAATTATTTCTCCAGGACACAACTCTAGGATTAGATGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGATATAATTATTTCTCCAGGACACAACTCTAGGATTAGATGGTA  350

seq1  ATTCTATTTGACTTACATAAAGGGGAATTATTACTGCAGTTACCTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTGACTTACATAAAGGGGAATTATTACTGCAGTTACCTTTAAA  400

seq1  GAGCTCTCTGGGTTTGCTGGGAGTATCTGAATTAACAGTAAATTGAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTCTGGGTTTGCTGGGAGTATCTGAATTAACAGTAAATTGAGGCC  450

seq1  CATTACATATTAATGGGTCAGCTGATTTATTGGTGGTGTTAGCTGGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATATTAATGGGTCAGCTGATTTATTGGTGGTGTTAGCTGGCAAT  500

seq1  TAGCCATCCTGCACAGTGTCTTCTGTTGGGGCATTACTTTCTCACTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATCCTGCACAGTGTCTTCTGTTGGGGCATTACTTTCTCACTATTG  550

seq1  AGTGCCAGCTCAGGGATGAGCACCTTG-AACCAGTGGGGTATTCTCCCTG  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTGCCAGCTCAGGGATGAGCACCTTGAAACCAGTGGGGTATTCTCCCTG  600

seq1  TCAATCTAATAGGGCCTTGCATCATC-TTAATGGTGAG-TTATGGTCTGT  647
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  TCAATCTAATAGGGCCTTGCATCATCTTTAATGGTGAGTTTATGGTCTGT  650

seq1  CCTGAAGGATATTTGGACACACTTAATATC-TTTGGATGACAACCATTGG  696
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGAAGGATATTTGGACACACTTAATATCTTTTGGATGACAACCATTGG  700

seq1  -AAGCATAAATGAAAGTACATG-TTGTCA-TTGAGCCACTAAAAATTTTT  743
       ||||||||||||||||||||| |||||| ||||||||||||||| ||||
seq2  AAAGCATAAATGAAAGTACATGTTTGTCATTTGAGCCACTAAAAA-TTTT  749

seq1  ACCCAGTCACCAGATAG-CCATTATGGTGTATGGATTGCTTTGGATATTT  792
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCCAGTCACCAGATAGCCCATTATGGTGTATGGATTGCTTTGGATATTT  799

seq1  CTCTTATTTTTTTATATTATAAAATTCCCTTTAGTTTCTGTGGCACTTAT  842
      |||||||||||||||||||| |||||||||||   |||||||||||||||
seq2  CTCTTATTTTTTTATATTAT-AAATTCCCTTTTAGTTCTGTGGCACTTAT  848

seq1  AGGACGTTTTTCTATGAGTCAGCTGTAGCACAGGATGTTATGGCCCACAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGTTTTTCTATGAGTCAGCTGTAGCACAGGATGTTATGGCCCACAG  898

seq1  TATTTATTTGCAAGAGTTAC-TTTGGGGTGTCTAATTTGTTCTCAAGAGA  941
      ||||   ||| ||||||||| |||||||||||||||||||||||||||||
seq2  TATT--ATTGGAAGAGTTACTTTTGGGGTGTCTAATTTGTTCTCAAGAGA  946

seq1  AATATGTATATATATATT  959
      |      | | |||||||
seq2  A------AAAGATATATT  958