BAC Information

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BAC

Clone NameB6Ng01-122A07
Chromosome3 (Build37)
Map Location 46,750,355 - 46,856,916
singlet/doubletdoublet
Overlap geneLOC545517
Upstream geneEG241989
Downstream geneLOC383849, LOC383850, LOC100039426, LOC666202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122A07.bB6Ng01-122A07.g
ACCDH925554DH925555
length1,029970
definitionDH925554|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A07, 5' end.DH925555|Mus musculus domesticus DNA, BAC clone: B6Ng01-122A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,856,181 - 46,856,916)(46,750,355 - 46,751,171)
sequence
gaattctcttggactccagtcccagactggggctgtagagatatcccatc
aggattaaatagctactgtattcttggcctttctattctgagacagccat
tctctaatcacagagtatagcctagcatatatagccactctatcagctct
gttcttactaatgtacatatttaaatcattcataaattccttctcactgg
gtttaaattcacatactgtgtaactaaagttaagtagaatgctgacttgt
tttaaggtctgcttccttctaaccactcttccacattattttcccctaga
gaatccagcctgtcatgccaaagtccactgctaccatgccatattggcaa
aggcaatttaatgtacgtacaactgaattgtactaaagtgttgcacactg
gaagtgggactcagttttgtagttatctgtttactgcctttaatttttct
ttatctccattctcttctttaagtttatgatctcatcaaaacatttttaa
tataccttactgcttggtgatgtagcttcatggacagtattctggtctaa
catacacagcacggtttattccatgatatcacacaaaccttagttccaag
atatatgcacacagggagcccatactttggtgcctgaaagcagtaagacc
agtactggtataaggtcatctccaacttcacagcaagattaaggtcagtc
tctgctaaatggaaatttgtctgaaatgaaatagtaatagtgagagtctt
caataccctgctcaacaacaagaggtcatcagacaaaatcaaaacataaa
aatggtaaagctaacagacaatataaaccaaatggtcctaacacatattt
atagaacttttatttaaatacaatgaagtatatcttattctctgtagatc
atcgaatgttcttcaaaagtgacaatatacttcattaaacaccaagtctc
aacaaattaacaatatacactagtcttcacaccacaaaaccaaaccaaac
caaacaaacaaaaacatcacacaaaatga
gaattcagcttgaaggatttgtgttttactgataacaatcttcagaaaat
agaattgtacatgtagaaccggccactttttgtaaactttttacgtgaag
ttgtgatccaagataacttaaagccagaaaacttggatttcttaaaactc
tgaatgagatttttatgtgatactttatttacttaccaaaatagaagaca
ctagtaatctaacagtgccctttccccaaagaaaagtgactttccctcct
caggtagctacaaattgataatagtccctaaaaagttaaattcttaatat
cctgaatgagattttatgtgatgctttatttactaacataatcagtaaat
atccatgttgaaattcattcactaattcagcaggtaacaataatagtgag
gaaggttgtagcagtttttaagatggcaaaatgatggaattcatatatct
tacagtttattcactaaaatattctataattatgcaaattcagaagtttg
atagttaattgaagaagaaaataaatatgtgcttcctatatctccaatag
ttgcagttagactattcattcatgtttaagtcttctattttatcccatgg
ttctatatgtatgtttctgccctaacttttttttattttagttctatatt
gcatcttgaatagcaatttgtccaaagtctttttgcttaaaattggcttg
aatatcagtctctcttctggttctgtagaaactttagaatatactatttt
ctatttctgtgaaaagtagtaagagtatcaagattgggattgcattgaat
ctgcaaatttcctttgggaaatgtctgtttccaaagcactagctcaccca
atcagtgaatacaggatgtgcgatcattttctagggccctcttcagtctc
tttcttcagagactggatgttttcattgtagaatgtctttactttattcc
tagatccttattgagtttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46856181_46856916
seq2: B6Ng01-122A07.b_49_784 (reverse)

seq1  TACTATTTCATTTCAGACAAATTTCCATTTAGCAGAGACTGACCTTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTCATTTCAGACAAATTTCCATTTAGCAGAGACTGACCTTAATC  50

seq1  TTGCTGTGAAGTTGGAGATGACCTTATACCAGTACTGGTCTTACTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGAAGTTGGAGATGACCTTATACCAGTACTGGTCTTACTGCTTT  100

seq1  CAGGCACCAAAGTATGGGCTCCCTGTGTGCATATATCTTGGAACTAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACCAAAGTATGGGCTCCCTGTGTGCATATATCTTGGAACTAAGGT  150

seq1  TTGTGTGATATCATGGAATAAACCGTGCTGTGTATGTTAGACCAGAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGATATCATGGAATAAACCGTGCTGTGTATGTTAGACCAGAATAC  200

seq1  TGTCCATGAAGCTACATCACCAAGCAGTAAGGTATATTAAAAATGTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGAAGCTACATCACCAAGCAGTAAGGTATATTAAAAATGTTTTG  250

seq1  ATGAGATCATAAACTTAAAGAAGAGAATGGAGATAAAGAAAAATTAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATCATAAACTTAAAGAAGAGAATGGAGATAAAGAAAAATTAAAGG  300

seq1  CAGTAAACAGATAACTACAAAACTGAGTCCCACTTCCAGTGTGCAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAACAGATAACTACAAAACTGAGTCCCACTTCCAGTGTGCAACACT  350

seq1  TTAGTACAATTCAGTTGTACGTACATTAAATTGCCTTTGCCAATATGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACAATTCAGTTGTACGTACATTAAATTGCCTTTGCCAATATGGCA  400

seq1  TGGTAGCAGTGGACTTTGGCATGACAGGCTGGATTCTCTAGGGGAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCAGTGGACTTTGGCATGACAGGCTGGATTCTCTAGGGGAAAATA  450

seq1  ATGTGGAAGAGTGGTTAGAAGGAAGCAGACCTTAAAACAAGTCAGCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAGAGTGGTTAGAAGGAAGCAGACCTTAAAACAAGTCAGCATTC  500

seq1  TACTTAACTTTAGTTACACAGTATGTGAATTTAAACCCAGTGAGAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACTTTAGTTACACAGTATGTGAATTTAAACCCAGTGAGAAGGAA  550

seq1  TTTATGAATGATTTAAATATGTACATTAGTAAGAACAGAGCTGATAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATGATTTAAATATGTACATTAGTAAGAACAGAGCTGATAGAGT  600

seq1  GGCTATATATGCTAGGCTATACTCTGTGATTAGAGAATGGCTGTCTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATATATGCTAGGCTATACTCTGTGATTAGAGAATGGCTGTCTCAGA  650

seq1  ATAGAAAGGCCAAGAATACAGTAGCTATTTAATCCTGATGGGATATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGGCCAAGAATACAGTAGCTATTTAATCCTGATGGGATATCTCT  700

seq1  ACAGCCCCAGTCTGGGACTGGAGTCCAAGAGAATTC  736
      ||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCAGTCTGGGACTGGAGTCCAAGAGAATTC  736

seq1: chr3_46750355_46751171
seq2: B6Ng01-122A07.g_66_881

seq1  GAATTCAGCTTGAAGGATTTGTGTTTTACTGATAACAATCTTCAGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTGAAGGATTTGTGTTTTACTGATAACAATCTTCAGAAAAT  50

seq1  AGAATTGTACATGTAGAACCGGCCACTTTTTGTAAACTTTTTACGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGTACATGTAGAACCGGCCACTTTTTGTAAACTTTTTACGTGAAG  100

seq1  TTGTGATCCAAGATAACTTAAAGCCAGAAAACTTGGATTTCTTAAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATCCAAGATAACTTAAAGCCAGAAAACTTGGATTTCTTAAAACTC  150

seq1  TGAATGAGATTTTTATGTGATACTTTATTTACTTACCAAAATAGAAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGATTTTTATGTGATACTTTATTTACTTACCAAAATAGAAGACA  200

seq1  CTAGTAATCTAACAGTGCCCTTTCCCCAAAGAAAAGTGACTTTCCCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAATCTAACAGTGCCCTTTCCCCAAAGAAAAGTGACTTTCCCTCCT  250

seq1  CAGGTAGCTACAAATTGATAATAGTCCCTAAAAAGTTAAATTCTTAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGCTACAAATTGATAATAGTCCCTAAAAAGTTAAATTCTTAATAT  300

seq1  CCTGAATGAGATTTTATGTGATGCTTTATTTACTAACATAATCAGTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGAGATTTTATGTGATGCTTTATTTACTAACATAATCAGTAAAT  350

seq1  ATCCATGTTGAAATTCATTCACTAATTCAGCAGGTAACAATAATAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTTGAAATTCATTCACTAATTCAGCAGGTAACAATAATAGTGAG  400

seq1  GAAGGTTGTAGCAGTTTTTAAGATGGCAAAATGATGGAATTCATATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGTAGCAGTTTTTAAGATGGCAAAATGATGGAATTCATATATCT  450

seq1  TACAGTTTATTCACTAAAATATTCTATAATTATGCAAATTCAGAAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTATTCACTAAAATATTCTATAATTATGCAAATTCAGAAGTTTG  500

seq1  ATAGTTAATTGAAGAAGAAAATAAATATGTGCTTCCTATATCTCCAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATTGAAGAAGAAAATAAATATGTGCTTCCTATATCTCCAATAG  550

seq1  TTGCAGTTAGACTATTCATTCATGTTTAAGTCTTCTATTTTATCCCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTAGACTATTCATTCATGTTTAAGTCTTCTATTTTATCCCATGG  600

seq1  TTCTATATGTATGTTTCTGCCCTAACTTTTTTTTATTTTAGTTCTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATGTATGTTTCTGCCCTAACTTTTTTTTATTTTAGTTCTATATT  650

seq1  GCATCTTGAATAGCAATTTGTCCAAAGTCTTTTTGCTTAAAATTGGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTGAATAGCAATTTGTCCAAAGTCTTTTTGCTTAAAATTGGCTTG  700

seq1  AATATCAGGTCTCTCTTCTGGTTCTGTAGAAACTTTAGAATATACTATTT  750
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCA-GTCTCTCTTCTGGTTCTGTAGAAACTTTAGAATATACTATTT  749

seq1  TCTATTTCTGTGAAAAGTAGTAAGAGTATCAAGATTGGGATTGCATTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTGTGAAAAGTAGTAAGAGTATCAAGATTGGGATTGCATTGAA  799

seq1  TCTGCAAATTTCCTTTG  817
      |||||||||||||||||
seq2  TCTGCAAATTTCCTTTG  816