BAC Information

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BAC

Clone NameB6Ng01-122B23
Chromosome3 (Build37)
Map Location 118,205,706 - 118,206,835
singlet/doubletsinglet
Overlap genenone
Upstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122B23.bB6Ng01-122B23.g
ACCDH925634DH925635
length1,1231,147
definitionDH925634|Mus musculus domesticus DNA, BAC clone: B6Ng01-122B23, 5' end.DH925635|Mus musculus domesticus DNA, BAC clone: B6Ng01-122B23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcgtttttgtgctgagaacatcattgaccctgatttcagaatt
ttgtttgatgtagagtaacaggcaaaatcattatcttcattaaaccatgg
agagaaagatttcttgggtaagcatggagaaataaaacaagagctgtgga
gatgcttctgcgtttaaagaacttgttacttgtgcatcggtgtagaactc
acacaaagactgggagcaggcaggaactgtaaatatccagagctggttgg
ctagcaagcctagccacatcagctagtttggcttttggctgagtgacatt
gcctagttaaatatggcagaaagcagagatcaagaatgactaccgacttc
aacttacacatgggtgtgcacctacatgatgtatacctgcacacacataa
atgcacaaccacacatgcaagcatgcatacacatacacacatgctatatg
cacacaagaaatgggaaaagaacagtaaatagaaaataggagggtttgta
atctttttaaggagctgggaagatttacagcctaatgtgaatattcccaa
agagaaaaggtgaagctttttagacccggggttttggccaaaaccagaca
ccttttccaaggaagagggagcaacattctaccatttttccaaaagctat
tgttaaatcatgctaagacaaaatgtcaaggctggtaggccatccaagtg
ttgggaggtaaaccttggattagcttcctaagaaaatgatagaagggttt
tatcctaggatgtcagaggtgggatttgaacctgcagacagattccacaa
gcttgtaaaatattgcctttccccatctcatcattaggatatctactggc
tccaaatattctatctatgtacagttctacagggagttaccctgtctgtg
ccattttctccacccttagggagcctggactggagcagagctgaagggat
ttttctcaaggattttctaaatgttgacctactcagttctgcacgggatc
cagctctatggtttggtttgttgccgttattattgttttaggcagtacct
ggttctatccagctgccctgacctcagtatgaagctgaaggtggagctct
gtcagctctcctatctctcatca
gaattctcacctgaggaataccaaatgatggagaagcacctgaaaaattg
ttcaacatccttaatcatcatggaaatgcaaatcaaaacaacccagagat
tccacatcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agattctggcatggatgtggagaaagaggaacactcctcattgttggtgg
gattgcaagcttgtacaaccactctggaaatcaggctggcagttcctcag
aaaattggacatagtactaccataggatcccgcaatacctctcccgggca
tatatccagaagaggttccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcgtcctgagcgaggtaacccaatcacaaaa
gaactcacagaatatgtactcactgataagtggatgttagcccagaaact
tagaatacccaagatataagatacaatttgctaaacgcatgaaactcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgaggcga
aatgttggaccatctagagactgccatatccagggatccatcccataatt
agcttccaatgctgacaccattgcatacactagcaggattttgctgaaag
gacccagatatagctgtctcttgtgagactatgccgggcctaacaaacac
agaaatggatgctcacatcactattgatggatcacagggctcatgagagc
tagagaagtactcagagctaaaggatctgtatctacaggtggaccacata
tggactacagtatcttccctccccactctcagagctgtgtctctagctgc
atatgaaatcgaagatggctagtcgcatcagggaggagaggtcatgtcat
ggcaactttaaggctcagatcaggacgtcacgcccaaaaatatagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118205706_118206835
seq2: B6Ng01-122B23.b_45_1167

seq1  GAATTCCTCGTTTTTGTGCTGAGAACATCATTGACCCTGATTTCAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGTTTTTGTGCTGAGAACATCATTGACCCTGATTTCAGAATT  50

seq1  TTGTTTGATGTAGAGTAACAGGCAAAATCATTATCTTCATTAAACCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGATGTAGAGTAACAGGCAAAATCATTATCTTCATTAAACCATGG  100

seq1  AGAGAAAGATTTCTTGGGTAAGCATGGAGAAATAAAACAAGAGCTGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGATTTCTTGGGTAAGCATGGAGAAATAAAACAAGAGCTGTGGA  150

seq1  GATGCTTCTGCGTTTAAAGAACTTGTTACTTGTGCATCGGTGTAGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTCTGCGTTTAAAGAACTTGTTACTTGTGCATCGGTGTAGAACTC  200

seq1  ACACAAAGACTGGGAGCAGGCAGGAACTGTAAATATCCAGAGCTGGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGACTGGGAGCAGGCAGGAACTGTAAATATCCAGAGCTGGTTGG  250

seq1  CTAGCAAGCCTAGCCACATCAGCTAGTTTGGCTTTTGGCTGAGTGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGCCTAGCCACATCAGCTAGTTTGGCTTTTGGCTGAGTGACATT  300

seq1  GCCTAGTTAAATATGGCAGAAAGCAGAGATCAAGAATGACTACCGACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTTAAATATGGCAGAAAGCAGAGATCAAGAATGACTACCGACTTC  350

seq1  AACTTACACATGGGTGTGCACCTACATGATGTATACCTGCACACACATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACACATGGGTGTGCACCTACATGATGTATACCTGCACACACATAA  400

seq1  ATGCACAACCACACATGCAAGCATGCATACACATACACACATGCTATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAACCACACATGCAAGCATGCATACACATACACACATGCTATATG  450

seq1  CACACAAGAAATGGGAAAAGAACAGTAAATAGAAAATAGGAGGGTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGAAATGGGAAAAGAACAGTAAATAGAAAATAGGAGGGTTTGTA  500

seq1  ATCTTTTTAAGGAGCTGGGAAGATTTACAGCCTAATGTGAATATTCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTAAGGAGCTGGGAAGATTTACAGCCTAATGTGAATATTCCCAA  550

seq1  AGAGAAAAGGTGAAGCTTTTTAGACCCGGGGTTTTGGCCAAAACCAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGGTGAAGCTTTTTAGACCCGGGGTTTTGGCCAAAACCAGACA  600

seq1  CCTTTTCCAAGGAAGAGGGAGCAACATTCTACCATTTTTCCAAAAGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCAAGGAAGAGGGAGCAACATTCTACCATTTTTCCAAAAGCTAT  650

seq1  TGTTAAATCATGCTAAGACAAAATGTCAAGGCTGGTAGGCCATCCAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATCATGCTAAGACAAAATGTCAAGGCTGGTAGGCCATCCAAGTG  700

seq1  TTGGGAGGTAAACCTTGGATTAGCTTCCTAAGAAAATGATAGAAGGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGTAAACCTTGGATTAGCTTCCTAAGAAAATGATAGAAGGGTTT  750

seq1  TATCCTAGGATGTCAGAGGTGGGATTTGAACCTGCAGACAGATTCCACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGGATGTCAGAGGTGGGATTTGAACCTGCAGACAGATTCCACAA  800

seq1  GCTTGTAAAATATTGCCTTTCCCCATCTCATCATTAGGATATCTACTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAAAATATTGCCTTTCCCCATCTCATCATTAGGATATCTACTGGC  850

seq1  TCCAAATATTCTATCTATGTACAGTTCTACAGGGAGTTACCCTGTCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATATTCTATCTATGTACAGTTCTACAGGGAGTTACCCTGTCTGTG  900

seq1  CCATTTTCTCCACCCTTAGGGAGCCTGGACTGGAGCAGAGCTGAAGGGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTCCACCCTTAGGGAGCCTGGACTGGAGCAGAGCTGAAGGGAT  950

seq1  TTTTCTCAAAGGATTTTCTAAATGTTGAACCTACTCAGTTCTGCACGGGA  1000
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTTCTC-AAGGATTTTCTAAATGTTG-ACCTACTCAGTTCTGCACGGGA  998

seq1  TCCAGCTCTTATGGTTTGGTTTTGTTGCCGTTATTATTGTTTTTAGGGCA  1050
      |||||||| |||||||||| |||||||||||||||||||||||   ||||
seq2  TCCAGCTC-TATGGTTTGG-TTTGTTGCCGTTATTATTGTTTT--AGGCA  1044

seq1  GTACCTGG-TCTATCCCAGGCTGCCCTTGAACTCAGTATGAAGCTGAA-G  1098
      |||||||| |||||||   ||||||| ||| ||||||||||||||||| |
seq2  GTACCTGGTTCTATCC--AGCTGCCC-TGACCTCAGTATGAAGCTGAAGG  1091

seq1  TTGAGCTCTGTCAGCTCTTCCTATCTC-CATCA  1130
      | ||||||||||||||| ||||||||| |||||
seq2  TGGAGCTCTGTCAGCTC-TCCTATCTCTCATCA  1123