BAC Information

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BAC

Clone NameB6Ng01-122F14
Chromosome3 (Build37)
Map Location 119,173,059 - 119,296,833
singlet/doubletdoublet
Overlap geneLOC100043275
Upstream geneDpyd
Downstream geneLOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122F14.bB6Ng01-122F14.g
ACCDH925798DH925799
length1,158120
definitionDH925798|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F14, 5' end.DH925799|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,295,661 - 119,296,833)(119,173,059 - 119,173,178)
sequence
gaattcagtaatttatataatggttccgagaccctgtctagggagtttag
aagagatagatgtgaacaagtaggacatgtaaggtatgcagaaaggaaaa
agttctggggatttggtaatagaagctgttcaccatgagggatctgaaaa
caaagcatcctagtgtggtgcaaccagaaaccggaaggaagaaagagacg
agggccatgcaaaaaattatggggaagagatttcatatagaaagagcata
agacaagagtattctgagtgtattgaaaagaacccagacaaatgacctga
catggcacaagggaacagaactagagggaaatagaaactgagcccagaga
catgctaagttctgaaccccaggtaaacatttgaggagctcagtttaaac
ctaattgagatgagggcataaggaagactgtggaagcagggacttgatga
aactgactctagttatgagcacatctctggctgctaaggatggggaaatg
agcacagaaggtaagacattaggcatatttgtcttagtcactgttttatt
tctatcataaaacaccacaaccaacctaacttataaacaaaagcatttaa
tcttggttatggtttcagagggctagagtctatgatgtcagagtgaagaa
acagctaagagctcacatcttgatcctcagtcatggggtagtaagaggac
actgatgataacatgagtcttttgaaacttcaaatcctgccccagtgaca
cacgacctcccacaaggccaagcctcttcatctttcccaaacagttccac
caactggggactgaatattcaaatatatgtgactatgaggccattctcat
caaacccaccataaaggtcagagcatgaaaaaatttgaacgtttctttga
aggctgctgctgataatgtggtgtgatattaaagtaagatacaagatttc
tattttgacctattcaaagaaagagctcatattttcctagctgaataaac
ctggaaaagagtagcatggttaacacatgattatatatagtagtctattg
aaatccaagcagctattctcaagtaagtagtggatattcaaagtaaaagt
cccaggtcaaaatctttcaaatccttgaatatagtggtgctatgcttatt
gaaagagg
acagcatcatgcagaagagagaaggaagctagtggagttggaaaggatgt
ttctcagcctagcataataggaataatggaatggaagagagagcagaagt
gggagagtggggagggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119295661_119296833
seq2: B6Ng01-122F14.b_48_1205 (reverse)

seq1  CCTCTTTCTTCCACCCTCTTCATAGCATGCACACTATAATCCAGGATTTT  50
      |||||||      |  |   |||||||    ||||||| || ||||||| 
seq2  CCTCTTT------CAATAAGCATAGCA---CCACTATATTCAAGGATTTG  41

seq1  GATGATTTTTGACTGGGACTTTTTACTTTG-ATATCCAACTACTTACTTG  99
       | ||||||   ||||||| |||||||||| |||||| ||||||||||||
seq2  AAAGATTTTGACCTGGGAC-TTTTACTTTGAATATCC-ACTACTTACTTG  89

seq1  AG-ATAGCTGCTTGGATTTCCAATAGACTACTATATATAATCATGTGTTA  148
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAATAGCTGCTTGGATTT-CAATAGACTACTATATATAATCATGTGTTA  138

seq1  ACCAATGCTACTCTGTCTCCAGGTTTATTCAGCTAGGAAAATATGAGCCT  198
      ||| |||||||||| | |||||||||||||||||||||||||||||| ||
seq2  ACC-ATGCTACTCT-TTTCCAGGTTTATTCAGCTAGGAAAATATGAG-CT  185

seq1  CTTTCTTTGAATAGGTCAAAATAGAAATCTTGGTATCTTTACTTTAATAT  248
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  CTTTCTTTGAATAGGTCAAAATAGAAATCTT-GTATC-TTACTTTAATAT  233

seq1  CACACCACATTATCAGCAGCAGCCTTCAAAGAAACGTTCAAATTTTTTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCACATTATCAGCAGCAGCCTTCAAAGAAACGTTCAAATTTTTTCA  283

seq1  TGCTCTGACCTTTATGGTGGGTTTGATGAGAATGGCCTCATAGTCACATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGACCTTTATGGTGGGTTTGATGAGAATGGCCTCATAGTCACATA  333

seq1  TATTTGAATATTCAGTCCCCAGTTGGTGGAACTGTTTGGGAAAGATGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAATATTCAGTCCCCAGTTGGTGGAACTGTTTGGGAAAGATGAAG  383

seq1  AGGCTTGGCCTTGTGGGAGGTCGTGTGTCACTGGGGCAGGATTTGAAGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGCCTTGTGGGAGGTCGTGTGTCACTGGGGCAGGATTTGAAGTT  433

seq1  TCAAAAGACTCATGTTATCATCAGTGTCCTCTTACTACCCCATGACTGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGACTCATGTTATCATCAGTGTCCTCTTACTACCCCATGACTGAG  483

seq1  GATCAAGATGTGAGCTCTTAGCTGTTTCTTCACTCTGACATCATAGACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGATGTGAGCTCTTAGCTGTTTCTTCACTCTGACATCATAGACTC  533

seq1  TAGCCCTCTGAAACCATAACCAAGATTAAATGCTTTTGTTTATAAGTTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTCTGAAACCATAACCAAGATTAAATGCTTTTGTTTATAAGTTAG  583

seq1  GTTGGTTGTGGTGTTTTATGATAGAAATAAAACAGTGACTAAGACAAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTGTGGTGTTTTATGATAGAAATAAAACAGTGACTAAGACAAATA  633

seq1  TGCCTAATGTCTTACCTTCTGTGCTCATTTCCCCATCCTTAGCAGCCAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAATGTCTTACCTTCTGTGCTCATTTCCCCATCCTTAGCAGCCAGA  683

seq1  GATGTGCTCATAACTAGAGTCAGTTTCATCAAGTCCCTGCTTCCACAGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCTCATAACTAGAGTCAGTTTCATCAAGTCCCTGCTTCCACAGTC  733

seq1  TTCCTTATGCCCTCATCTCAATTAGGTTTAAACTGAGCTCCTCAAATGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATGCCCTCATCTCAATTAGGTTTAAACTGAGCTCCTCAAATGTT  783

seq1  TACCTGGGGTTCAGAACTTAGCATGTCTCTGGGCTCAGTTTCTATTTCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGGGTTCAGAACTTAGCATGTCTCTGGGCTCAGTTTCTATTTCCC  833

seq1  TCTAGTTCTGTTCCCTTGTGCCATGTCAGGTCATTTGTCTGGGTTCTTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCTGTTCCCTTGTGCCATGTCAGGTCATTTGTCTGGGTTCTTTT  883

seq1  CAATACACTCAGAATACTCTTGTCTTATGCTCTTTCTATATGAAATCTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACACTCAGAATACTCTTGTCTTATGCTCTTTCTATATGAAATCTCT  933

seq1  TCCCCATAATTTTTTGCATGGCCCTCGTCTCTTTCTTCCTTCCGGTTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATAATTTTTTGCATGGCCCTCGTCTCTTTCTTCCTTCCGGTTTCT  983

seq1  GGTTGCACCACACTAGGATGCTTTGTTTTCAGATCCCTCATGGTGAACAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCACCACACTAGGATGCTTTGTTTTCAGATCCCTCATGGTGAACAG  1033

seq1  CTTCTATTACCAAATCCCCAGAACTTTTTCCTTTCTGCATACCTTACATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTACCAAATCCCCAGAACTTTTTCCTTTCTGCATACCTTACATG  1083

seq1  TCCTACTTGTTCACATCTATCTCTTCTAAACTCCCTAGACAGGGTCTCGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTGTTCACATCTATCTCTTCTAAACTCCCTAGACAGGGTCTCGG  1133

seq1  AACCATTATATAAATTACTGAATTC  1173
      |||||||||||||||||||||||||
seq2  AACCATTATATAAATTACTGAATTC  1158

seq1: chr3_119173059_119173178
seq2: B6Ng01-122F14.g_72_191

seq1  ACAGCATCATGCAGAAGAGAGAAGGAAGCTAGTGGAGTTGGAAAGGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCATGCAGAAGAGAGAAGGAAGCTAGTGGAGTTGGAAAGGATGT  50

seq1  TTCTCAGCCTAGCATAATAGGAATAATGGAATGGAAGAGAGAGCAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCCTAGCATAATAGGAATAATGGAATGGAAGAGAGAGCAGAAGT  100

seq1  GGGAGAGTGGGGAGGGGGAA  120
      ||||||||||||||||||||
seq2  GGGAGAGTGGGGAGGGGGAA  120