BAC Information

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BAC

Clone NameB6Ng01-122K19
Chromosome3 (Build37)
Map Location 121,236,555 - 121,361,786
singlet/doubletdoublet
Overlap geneA730020M07Rik
Upstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3
Downstream gene4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3, Fnbp1l, Ppia-ps3_2252.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122K19.bB6Ng01-122K19.g
ACCDH926038DH926039
length1,1801,093
definitionDH926038|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K19, 5' end.DH926039|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,360,603 - 121,361,786)(121,236,555 - 121,237,658)
sequence
gaattctcaccatgtgcaccaccatgactcaacctcacacacaaaatgtc
tagtgaaagaaagcaaatacgagagtacgaactcaatgatcgcatctcta
caaagctcaaaaaaacagacacgactcatcagacaaaagtcaacaaggag
tcaggaatggtgacacacgttcctccacttaaccccaccattggtgaagc
tgtggcaggcaataccaagttcaaagccaacctaggctttatggtcagac
tttgcctcaaaataaagaaatgaataaagtcaagagagtagttacccgtg
ttttgggataggaactggaaggggtctggagagggcctctaggatccggt
ctatgtctagttcatgatctgggtacaaacatgtaaggctgttcaatctg
cgagaatccagtgggaattttcacacacccttgatctgtggatttgggtg
tatatgcgaacaatttcataaaattataaaagataagaagtagtggtata
tacaaaaggataaggctgggtttttgcttcacatcatttgcaaaattaac
ctaaaatatgcttttctccttgccttgatgccctgtaggttgggctcacc
caggtgttgcttcaatcctgttacattctatgtacttttggggtgttccc
gatcccccgaaacaggtactttctatataattttggacatggcacagcta
ccaagacattcagatataaaaatcatactatcatgaattgatactcgctt
ttacctgtacccatacatgtattttacacatatgctattccaggctcttt
acataaacttatttacccttcagtgatgtgctttagatgcccttatctcc
attatacagatgagtaaactgaggttttgcatgacccataaactgtccca
gggccacgttattggccaatgttcagccagaaatcacaatcagatgtcta
gcttctgacacagatctcaaccactgtggcttctccccagtgattcttca
cgttcaagtaagatattgcttgtttttttatttaaaataccacttacact
gtgaaatgggctctttatttcttatctttgacgtagaaattaaaaaataa
attttaaagacatttgtgtcaggtcaattgttccacctctcggaattgga
gctgggcattgaaccggtacacccttggga
gaattcatcccctagagtccccccttcaagtagacatttgcacaactaca
gaaagagcacagtttagccacagcatctcaaacaaattagtaccagaacc
gatggatggagaggcttaaatacacacagcatgtatatttatatttactg
tgatgattacggtagtatcgatgaagccggaaaataaagatgaagcagaa
ccaaaaagctctgttagacatggagaataaaatgatcagaatgacagctt
atttggctccacttagtaacagtgtggattaagccatggaagagatgtgg
cagaagctgagtaagaaggaacggcagtgtttgcgtgacaatcacatctc
ttgtcacatcttgtcacatctcttggcctctggatatatgaatgacctgg
tgaagaaacctcctactttcatccaccacgtatctgcaccagtctcttat
atgtctcttactcaagtcttttatggtgcacaccggtcttcagaaaccat
tttctcctttcaaagtgtgaagacaattctttgtgtttccctgaaacctg
gtcctgatgggtgctatctggagatgctcattggagaaaataccatgtgg
tagatgtgtttccttatatatgacacaagtcgtaacacttagaagtgcca
ctgaatgcttttagtgccctttcttatgtaaggtgtcagagtgggagaaa
taattccaaggcacctggaattccttccctacatcttctccgctgatcaa
ccctatctacagtgtcttaaatagacaaaccaaaataaaaatttgagtat
atacagaaggaaaacttaaaacaccctgaaagaaaacttgtgactaataa
ctccgtcattagctatgaatgcccactactggatcctatttgaatcaaag
gcctgggagcgaggagagctgaagcaggggtttggagattgggagatggc
atagaaagagacctgtagacaaatgtcagctcttggtgaccgagaactag
cactttcattgtctagtggtaaatgtcaccgttgcagctcatttgtctac
tcttgaatgtgagaagtaaattgctcttccgacatactgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_121360603_121361786
seq2: B6Ng01-122K19.b_51_1230 (reverse)

seq1  TCCCAAGGGTGTATACGTTCAATGCCCCAGCTTCCAAT--CTCGAGGTTG  48
      |||||||||||||   |||||||| |||||| ||||||  |  ||||| |
seq2  TCCCAAGGGTGTACCGGTTCAATG-CCCAGC-TCCAATTCCGAGAGGTGG  48

seq1  GACAATTGACTTGACAC-AATGTCCTTTAAAAATTATTTTTAAATTTCTA  97
       ||||||||| |||||| ||||| |||||||| |||||||| ||||||||
seq2  AACAATTGACCTGACACAAATGT-CTTTAAAATTTATTTTTTAATTTCTA  97

seq1  CGTCAAAGAT-AGAAATATAGAGCCCCCTTTCACAAGTGTAAGTGGTATT  146
      |||||||||| ||||||| |||| ||| |||||| |||||||||||||||
seq2  CGTCAAAGATAAGAAATAAAGAG-CCCATTTCAC-AGTGTAAGTGGTATT  145

seq1  TTAAATAAAAAA--CAGCAATATCTTACTTGAACGTTGGAAGAATCACTG  194
      ||||||||||||   |||||||||||||||||||||  ||||||||||||
seq2  TTAAATAAAAAAACAAGCAATATCTTACTTGAACGT--GAAGAATCACTG  193

seq1  GGGAGAAGCCACAGTGGTTGAGATCTTGTGGTCAGAAGCTAGACATCCTG  244
      ||||||||||||||||||||||||| ||| |||||||||||||||| |||
seq2  GGGAGAAGCCACAGTGGTTGAGATC-TGT-GTCAGAAGCTAGACAT-CTG  240

seq1  ATTGTGATTTCTGGCTGAACATTGGCCAATAACGTGGCCCTGGGACAGTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATTTCTGGCTGAACATTGGCCAATAACGTGGCCCTGGGACAGTT  290

seq1  TATGGGTCATGCAAAACCTCAGTTTACTCATCTGTATAATGGAGATAAGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTCATGCAAAACCTCAGTTTACTCATCTGTATAATGGAGATAAGG  340

seq1  GCATCTAAAGCACATCACTGAAGGGTAAATAAGTTTATGTAAAGAGCCTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAAAGCACATCACTGAAGGGTAAATAAGTTTATGTAAAGAGCCTG  390

seq1  GAATAGCATATGTGTAAAATACATGTATGGGTACAGGTAAAAGCGAGTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCATATGTGTAAAATACATGTATGGGTACAGGTAAAAGCGAGTAT  440

seq1  CAATTCATGATAGTATGATTTTTATATCTGAATGTCTTGGTAGCTGTGCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCATGATAGTATGATTTTTATATCTGAATGTCTTGGTAGCTGTGCC  490

seq1  ATGTCCAAAATTATATAGAAAGTACCTGTTTCGGGGGATCGGGAACACCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAAATTATATAGAAAGTACCTGTTTCGGGGGATCGGGAACACCC  540

seq1  CAAAAGTACATAGAATGTAACAGGATTGAAGCAACACCTGGGTGAGCCCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTACATAGAATGTAACAGGATTGAAGCAACACCTGGGTGAGCCCA  590

seq1  ACCTACAGGGCATCAAGGCAAGGAGAAAAGCATATTTTAGGTTAATTTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGGGCATCAAGGCAAGGAGAAAAGCATATTTTAGGTTAATTTTG  640

seq1  CAAATGATGTGAAGCAAAAACCCAGCCTTATCCTTTTGTATATACCACTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATGTGAAGCAAAAACCCAGCCTTATCCTTTTGTATATACCACTA  690

seq1  CTTCTTATCTTTTATAATTTTATGAAATTGTTCGCATATACACCCAAATC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATCTTTTATAATTTTATGAAATTGTTCGCATATACACCCAAATC  740

seq1  CACAGATCAAGGGTGTGTGAAAATTCCCACTGGATTCTCGCAGATTGAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCAAGGGTGTGTGAAAATTCCCACTGGATTCTCGCAGATTGAAC  790

seq1  AGCCTTACATGTTTGTACCCAGATCATGAACTAGACATAGACCGGATCCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACATGTTTGTACCCAGATCATGAACTAGACATAGACCGGATCCT  840

seq1  AGAGGCCCTCTCCAGACCCCTTCCAGTTCCTATCCCAAAACACGGGTAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCCTCTCCAGACCCCTTCCAGTTCCTATCCCAAAACACGGGTAAC  890

seq1  TACTCTCTTGACTTTATTCATTTCTTTATTTTGAGGCAAAGTCTGACCAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTTGACTTTATTCATTTCTTTATTTTGAGGCAAAGTCTGACCAT  940

seq1  AAAGCCTAGGTTGGCTTTGAACTTGGTATTGCCTGCCACAGCTTCACCAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTAGGTTGGCTTTGAACTTGGTATTGCCTGCCACAGCTTCACCAA  990

seq1  TGGTGGGGTTAAGTGGAGGAACGTGTGTCACCATTCCTGACTCCTTGTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGGTTAAGTGGAGGAACGTGTGTCACCATTCCTGACTCCTTGTTG  1040

seq1  ACTTTTGTCTGATGAGTCGTGTCTGTTTTTTTGAGCTTTGTAGAGATGCG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTCTGATGAGTCGTGTCTGTTTTTTTGAGCTTTGTAGAGATGCG  1090

seq1  ATCATTGAGTTCGTACTCTCGTATTTGCTTTCTTTCACTAGACATTTTGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGAGTTCGTACTCTCGTATTTGCTTTCTTTCACTAGACATTTTGT  1140

seq1  GTGTGAGGTTGAGTCATGGTGGTGCACATGGTGAGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGTTGAGTCATGGTGGTGCACATGGTGAGAATTC  1180

seq1: chr3_121236555_121237658
seq2: B6Ng01-122K19.g_67_1159

seq1  GAATTCATCCCCTAGAGTCCCCCCTTCAAGTAGACATTTGCACAACTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCCTAGAGTCCCCCCTTCAAGTAGACATTTGCACAACTACA  50

seq1  GAAAGAGCACAGTTTAGCCACAGCATCTCAAACAAATTAGTACCAGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCACAGTTTAGCCACAGCATCTCAAACAAATTAGTACCAGAACC  100

seq1  GATGGATGGAGAGGCTTAAATACACACAGCATGTATATTTATATTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGGAGAGGCTTAAATACACACAGCATGTATATTTATATTTACTG  150

seq1  TGATGATTACGGTAGTATCGATGAAGCCGGAAAATAAAGATGAAGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATTACGGTAGTATCGATGAAGCCGGAAAATAAAGATGAAGCAGAA  200

seq1  CCAAAAAGCTCTGTTAGACATGGAGAATAAAATGATCAGAATGACAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGCTCTGTTAGACATGGAGAATAAAATGATCAGAATGACAGCTT  250

seq1  ATTTGGCTCCACTTAGTAACAGTGTGGATTAAGCCATGGAAGAGATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTCCACTTAGTAACAGTGTGGATTAAGCCATGGAAGAGATGTGG  300

seq1  CAGAAGCTGAGTAAGAAGGAACGGCAGTGTTTGCGTGACAATCACATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTGAGTAAGAAGGAACGGCAGTGTTTGCGTGACAATCACATCTC  350

seq1  TTGTCACATCTTGTCACATCTCTTGGCCTCTGGATATATGAATGACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATCTTGTCACATCTCTTGGCCTCTGGATATATGAATGACCTGG  400

seq1  TGAAGAAACCTCCTACTTTCATCCACCACGTATCTGCACCAGTCTCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAACCTCCTACTTTCATCCACCACGTATCTGCACCAGTCTCTTAT  450

seq1  ATGTCTCTTACTCAAGTCTTTTATGGTGCACACCGGTCTTCAGAAACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTTACTCAAGTCTTTTATGGTGCACACCGGTCTTCAGAAACCAT  500

seq1  TTTCTCCTTTCAAAGTGTGAAGACAATTCTTTGTGTTTCCCTGAAACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTTCAAAGTGTGAAGACAATTCTTTGTGTTTCCCTGAAACCTG  550

seq1  GTCCTGATGGGTGCTATCTGGAGATGCTCATTGGAGAAAATACCATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGATGGGTGCTATCTGGAGATGCTCATTGGAGAAAATACCATGTGG  600

seq1  TAGATGTGTTTCCTTATATATGACACAAGTCGTAACACTTAGAAGTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGTTTCCTTATATATGACACAAGTCGTAACACTTAGAAGTGCCA  650

seq1  CTGAATGCTTTTAGTGCCCTTTCTTATGTAAGGTGTCAGAGTGGGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCTTTTAGTGCCCTTTCTTATGTAAGGTGTCAGAGTGGGAGAAA  700

seq1  TAATTCCAAGGCACCTGGAAATTCCTTCCCTACATCTTCTCCGCTGATCA  750
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAATTCCAAGGCACCTGG-AATTCCTTCCCTACATCTTCTCCGCTGATCA  749

seq1  ACCCTATCTACAGTGTCTTAAATAGACAAACCAAAATAAAAATTTGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATCTACAGTGTCTTAAATAGACAAACCAAAATAAAAATTTGAGTA  799

seq1  TATACAGAAGGAAAACTTAAAACACCCTGAAAGAAAACTTGTGACTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAAGGAAAACTTAAAACACCCTGAAAGAAAACTTGTGACTAATA  849

seq1  ACTCCGTCATTAGCTATGAATGCCCACTACTGGATCCTATTTGAATCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGTCATTAGCTATGAATGCCCACTACTGGATCCTATTTGAATCAAA  899

seq1  GGCCTGGGAGCGAGGAAGAGCTGAAGCAGGGGGTTTGGAGATTGGGAGAT  950
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  GGCCTGGGAGCGAGG-AGAGCTGAAGCA-GGGGTTTGGAGATTGGGAGAT  947

seq1  GGCATAGGACAGAGACCTGTAGGACAAATGTCAGCCTCTTGGTGACCCGA  1000
      |||||| || ||||||||||| |||||||||||| |||||||||| ||||
seq2  GGCATA-GAAAGAGACCTGTA-GACAAATGTCAG-CTCTTGGTGA-CCGA  993

seq1  G-ACTAGCACTTTCATTGTCTAGTTGGGTAAATGTCACGGTTGGCAGAGC  1049
      | ||||||||||||||||||||||  |||||||||||| ||||    |||
seq2  GAACTAGCACTTTCATTGTCTAGT--GGTAAATGTCACCGTTG---CAGC  1038

seq1  TCATTTGTCTACTCTGAAATGTGAG-AGTAGATTTGCTCTTCACGAC-TA  1097
      |||||||||||||||  |||||||| |||| | ||||||||| |||| ||
seq2  TCATTTGTCTACTCTTGAATGTGAGAAGTA-AATTGCTCTTC-CGACATA  1086

seq1  CTGAAAA  1104
      |||||||
seq2  CTGAAAA  1093