BAC Information

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BAC

Clone NameB6Ng01-123B07
Chromosome3 (Build37)
Map Location 150,291,077 - 150,409,181
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040620, LOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123B07.bB6Ng01-123B07.g
ACCDH926345DH926346
length1,038305
definitionDH926345|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B07, 5' end.DH926346|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,408,134 - 150,409,181)(150,291,077 - 150,291,379)
sequence
gaattccacaacaatttttataacatttaatgagttaaaaatgtattcaa
aatccagaatcattaataataggggatcttggttatgaaatattagaagt
gagtaatacacaaaattgaggagagatattcttaattaattaaagaaata
tataaacttgtcaaaataaatgacatggagtatggatgaccatgaagtta
ttcagttagagaagtgagttgtatgtaaaaccaagtaagtctttaaaaat
tatgtaaaaaaaattcctactgagagaatcagtgtagagatttttgatgg
tagaaatatatgagtaaagcactaaagactggtaggccaagcctgaaaat
aaatggcttttagtgacaaacagcagacaacacgtgtattaaatagtttg
agcgttctaaaagatttccaatgagtggttacagagataaatttaatctt
taatgatgatgctaaggggtcattgagaaggaggctattcaaagaaaaac
caatgatatctgctgagagaggaaaggatatccttttcaatggaccagca
ctggattatatccatactccaaggcatggccagcacaaaactaactcctg
atttttttttttttattttttattaggtatttagctcatttacatttcca
atgctataccaaaagtcccccatacccacccacccccactcccctaccca
cccactccccctttttggccctggcattcccctgtacttgggcataaaag
ttttgcgtgtccaatgggcctctctttccagtgatggccgactaggccat
cttttgatacatatgcagctagagtcaagagctccggggtactgttagtt
cataatgttgttccacctatagggtgcagatccctttagctcctgggtac
tttctctagctcctccattgggagccctgtgatccttccattagctgact
gtgagcttcacttctgtgtgctaagcccggcatattctcacaagagacag
ttcatctgggtccttcataaatcttgctaatgtatgca
accatagagttaatctttggataaatagccaggctaagagcaaaagaaaa
aaagaaaaagaaagtaagaaagcaattatctctgaaatcatctctctctc
tctctctctctctctctctctctctctctctctctctcctacccccctct
ctccttctcctcctcttctctcctggttgtgtgtttaaatttagtaattt
cacttgcttcttttgtttcaaatatgcggcctctaattcctaatgcaaga
cataggactataaagacatgttttgtagagtgttgtatggtgaggtggga
gggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150408134_150409181
seq2: B6Ng01-123B07.b_45_1082 (reverse)

seq1  TGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCT  50
      |||||||| |||||||| |||||   ||||||||||||| | ||||||||
seq2  TGCATACATTAGCAAGA-TTTAT--GAAGGACCCAGATG-AACTGTCTCT  46

seq1  TGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTC  100
      ||||||| |||||| |||| ||||  |||||||||| || ||||||||||
seq2  TGTGAGAATATGCC-GGGCTTAGC--ACACAGAAGT-GAAGCTCACAGTC  92

seq1  AGCTAATGGAAGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGGAAGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAC  142

seq1  CCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  200
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CC-AGGAGCTAAAGGGATCTGC-ACCCTATAGGTGGAACAACATTATGAA  190

seq1  CTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGA  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAA-CAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGA  239

seq1  TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGC-AAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAAAC  289

seq1  TTTTATGCCCAAGTACAGGGGAATGCCAGGGCCAAAAAGGGGGAGTGGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCCCAAGTACAGGGGAATGCCAGGGCCAAAAAGGGGGAGTGGGT  339

seq1  GGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATT  389

seq1  GGAAATGTAAATGAGCTAAATACCTAATAAAAAATAAAAAAAAAAAAATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTAAATGAGCTAAATACCTAATAAAAAATAAAAAAAAAAAAATC  439

seq1  AGGAGTTAGTTTTGTGCTGGCCATGCCTTGGAGTATGGATATAATCCAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTAGTTTTGTGCTGGCCATGCCTTGGAGTATGGATATAATCCAGT  489

seq1  GCTGGTCCATTGAAAAGGATATCCTTTCCTCTCTCAGCAGATATCATTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCCATTGAAAAGGATATCCTTTCCTCTCTCAGCAGATATCATTGG  539

seq1  TTTTTCTTTGAATAGCCTCCTTCTCAATGACCCCTTAGCATCATCATTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGAATAGCCTCCTTCTCAATGACCCCTTAGCATCATCATTAA  589

seq1  AGATTAAATTTATCTCTGTAACCACTCATTGGAAATCTTTTAGAACGCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAATTTATCTCTGTAACCACTCATTGGAAATCTTTTAGAACGCTC  639

seq1  AAACTATTTAATACACGTGTTGTCTGCTGTTTGTCACTAAAAGCCATTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTTAATACACGTGTTGTCTGCTGTTTGTCACTAAAAGCCATTTA  689

seq1  TTTTCAGGCTTGGCCTACCAGTCTTTAGTGCTTTACTCATATATTTCTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGCTTGGCCTACCAGTCTTTAGTGCTTTACTCATATATTTCTAC  739

seq1  CATCAAAAATCTCTACACTGATTCTCTCAGTAGGAATTTTTTTTACATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAAATCTCTACACTGATTCTCTCAGTAGGAATTTTTTTTACATAA  789

seq1  TTTTTAAAGACTTACTTGGTTTTACATACAACTCACTTCTCTAACTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGACTTACTTGGTTTTACATACAACTCACTTCTCTAACTGAAT  839

seq1  AACTTCATGGTCATCCATACTCCATGTCATTTATTTTGACAAGTTTATAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATGGTCATCCATACTCCATGTCATTTATTTTGACAAGTTTATAT  889

seq1  ATTTCTTTAATTAATTAAGAATATCTCTCCTCAATTTTGTGTATTACTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTAATTAATTAAGAATATCTCTCCTCAATTTTGTGTATTACTCA  939

seq1  CTTCTAATATTTCATAACCAAGATCCCCTATTATTAATGATTCTGGATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATATTTCATAACCAAGATCCCCTATTATTAATGATTCTGGATTT  989

seq1  TGAATACATTTTTAACTCATTAAATGTTATAAAAATTGTTGTGGAATTC  1048
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACATTTTTAACTCATTAAATGTTATAAAAATTGTTGTGGAATTC  1038

seq1: chr3_150291077_150291379
seq2: B6Ng01-123B07.g_74_378

seq1  ACCATAGAGTTAATCTTTGGATAAATAGCCAGGCTAAGAGCAAAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGAGTTAATCTTTGGATAAATAGCCAGGCTAAGAGCAAAAGAAAA  50

seq1  AAAGAAAAAGAAAGTAAGAAAGCAATTATCTCTGAAATCA--TCTCTCTC  98
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  AAAGAAAAAGAAAGTAAGAAAGCAATTATCTCTGAAATCATCTCTCTCTC  100

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTACCCCCCTCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTACCCCCCTCT  150

seq1  CTCCTTCTCCTCCTCTTCTCTCCTGGTTGTGTGTTTAAATTTAGTAATTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCCTCCTCTTCTCTCCTGGTTGTGTGTTTAAATTTAGTAATTT  200

seq1  CACTTGCTTCTTTTGTTTCAAATATGCGGCCTCTAATTCCTAATGCAAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTTCTTTTGTTTCAAATATGCGGCCTCTAATTCCTAATGCAAGA  250

seq1  CATAGGACTATAAAGACATGTTTTGTAGAGTGTTGTATGGTGAGGTGGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGACTATAAAGACATGTTTTGTAGAGTGTTGTATGGTGAGGTGGGA  300

seq1  GGGTG  303
      |||||
seq2  GGGTG  305