BAC Information

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BAC

Clone NameB6Ng01-123B17
Chromosome3 (Build37)
Map Location 14,562,791 - 14,563,929
singlet/doubletsinglet
Overlap geneLrrcc1
Upstream gene0710005M24Rik, LOC100041679, LOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068
Downstream geneE2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123B17.bB6Ng01-123B17.g
ACCDH926365DH926366
length1,1461,202
definitionDH926365|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B17, 5' end.DH926366|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccgtgaaaaataggtaatagagtttaattgattagttttgattt
caagatgcagagtggtattaataacagagcctgcagacagcttcttatta
ggaagccctcttcatctctgtgggtccatatgcatagcggttattttctc
ctctttgtctttttaaagggatgcaatggaaaagcttcagaacatggatg
atgcctttagaagacaagtggatgagattgtggaagcgcaccaagctgaa
ataatgcagctagcaaatgagaagcagaagtatattgactgtgcaaattt
aaaggtacagtaagctaagatttactttaataatgttaaattattattgc
taaacaaattagatttttggaaactaaaagagaaaaggctgaacatattg
atgacataacctttaaagagcatgttgtcaaagttatgaatcttagcaaa
atgtcagtcattaacaggtaataactccagggaactgagtagtaagttaa
atctctgctgtcaccactctatgatcttagcagtctcccgtgcacatcct
ttggtcatgggcaaagggaaaatggaagttcaatctaccactgccttaga
aagctctcggtgatctcttccctgttctcacattagggtttaagtaatca
ggttggtcagttggatgagtttctggtgcttctgaggcaaacatcatggg
ctttaacctcatgaaggtaatgggtcccatcaaggtattttaacaatcac
tcaaatattctgatatgatcacttttttgagatccactagattcaaagat
acttaagaacttttcatcaattttcaagtggtaatgaaaaagcaaacaaa
aagaactaagttgtgtaagatacagaaataagcaaccaaaaagcattcaa
gaacagagagcaaatagtgcatgcttattccgtacctcagtactcaggat
gagacagatcagatatttatgccagactgcgctaaacaggaaaaacgtct
ccaaaaaaggggggagacgggactgaaaagatggctcagctgttatgagc
actggagcttctttaatgaggcccagaagtttagattctagcacccaatg
tgaacaaggccaggtcgccggcactctgtaaatgcctataactaga
gaattcctacagctgataaacaactttagcaaaatggccagatagaaaat
taacacaaactaatcagtagccttcctctacacaaaggataaactggttg
agaaagaaattaaggaaataacacccttcacaatagccataaacactata
aagtatctttgtgtgactctaaccaaaccagtgaaagatctgtatgacaa
gaacttcaagtctctgaagaaagaagtcaaagaagacctcagacaatgga
aagatctcccatgcttgtggattggcaggaataatatagtaaaaatggcc
atcttgctgaaagcaatatacagatacaattcaagccccatcaaaattcc
aactcaattcttcatagagttagaaacagcaattctcaaattcatttgag
aaaaaaaaaaaaaaaaaaaaaaacaaaaaacctaggatagtgaaaattac
tctcaacaataaaagaatttctgggagaatcagcatccataacctcaagc
tgttgtgataaaaactgcatggtattggcatattgacaggcaggaatggt
attggagagtcaaaatgaactggcacatctatggtcacttgatctttgac
aatggagctaaaccacccagtggaaaaaggacagcattttcaacaaaagg
tgctggttcaactggcaatcaacatgtaaaagaatgcaaattgatccatt
cttatctccctgtacaaagctcaagtccaagtggatcaaggacctccaca
taaagcagatatactgaacctaatagaagagacagtgggggagaagtctg
gaacacatgggcacagggtaaaagttctttaacagaggccaatggctcat
gctctaagatcagaattgacaaataggactcataaattgcaagctttttg
aaagcagagaaaggggacaaaatactcattgagcaaatggagacaaagtg
cagagcaaagaactgaagtaggcatcagagactttcccacattagaagtt
cacccagatacagtcacaactctgatactattgtagatgctagaatgctt
gctgaaagagctggaatagctaagtcctgcaagcctgcaccttatatata
gaagtgaatgtcttgtccacatatgcactgagatgtggttccatggagtt
acgagactgagttactgtagaattgacactctcatatggactcatatatt
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14562791_14563929
seq2: B6Ng01-123B17.b_47_1192

seq1  GAATTCCCGTGAAAAATAGGTAATAGAGTTTAATTGATTAGTTTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGTGAAAAATAGGTAATAGAGTTTAATTGATTAGTTTTGATTT  50

seq1  CAAGATGCAGAGTGGTATTAATAACAGAGCCTGCAGACAGCTTCTTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCAGAGTGGTATTAATAACAGAGCCTGCAGACAGCTTCTTATTA  100

seq1  GGAAGCCCTCTTCATCTCTGTGGGTCCATATGCATAGCGGTTATTTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCTCTTCATCTCTGTGGGTCCATATGCATAGCGGTTATTTTCTC  150

seq1  CTCTTTGTCTTTTTAAAGGGATGCAATGGAAAAGCTTCAGAACATGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTCTTTTTAAAGGGATGCAATGGAAAAGCTTCAGAACATGGATG  200

seq1  ATGCCTTTAGAAGACAAGTGGATGAGATTGTGGAAGCGCACCAAGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTAGAAGACAAGTGGATGAGATTGTGGAAGCGCACCAAGCTGAA  250

seq1  ATAATGCAGCTAGCAAATGAGAAGCAGAAGTATATTGACTGTGCAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCAGCTAGCAAATGAGAAGCAGAAGTATATTGACTGTGCAAATTT  300

seq1  AAAGGTACAGTAAGCTAAGATTTACTTTAATAATGTTAAATTATTATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACAGTAAGCTAAGATTTACTTTAATAATGTTAAATTATTATTGC  350

seq1  TAAACAAATTAGATTTTTGGAAACTAAAAGAGAAAAGGCTGAACATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAATTAGATTTTTGGAAACTAAAAGAGAAAAGGCTGAACATATTG  400

seq1  ATGACATAACCTTTAAAGAGCATGTTGTCAAAGTTATGAATCTTAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATAACCTTTAAAGAGCATGTTGTCAAAGTTATGAATCTTAGCAAA  450

seq1  ATGTCAGTCATTAACAGGTAATAACTCCAGGGAACTGAGTAGTAAGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGTCATTAACAGGTAATAACTCCAGGGAACTGAGTAGTAAGTTAA  500

seq1  ATCTCTGCTGTCACCACTCTATGATCTTAGCAGTCTCCCGTGCACATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCTGTCACCACTCTATGATCTTAGCAGTCTCCCGTGCACATCCT  550

seq1  TTGGTCATGGGCAAAGGGAAAATGGAAGTTCAATCTACCACTGCCTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGGGCAAAGGGAAAATGGAAGTTCAATCTACCACTGCCTTAGA  600

seq1  AAGCTCTCGGTGATCTCTTCCCTGTTCTCACATTAGGGTTTAAGTAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCGGTGATCTCTTCCCTGTTCTCACATTAGGGTTTAAGTAATCA  650

seq1  GGTTGGTCAGTTGGATGAGTTTCTGGTGCTTCTGAGGCAAACATCATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTCAGTTGGATGAGTTTCTGGTGCTTCTGAGGCAAACATCATGGG  700

seq1  CTTTAACCTCATGAAGGTAATGGGTCCCATCAAGGTATTTTAACAATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACCTCATGAAGGTAATGGGTCCCATCAAGGTATTTTAACAATCAC  750

seq1  TCAAATATTCTGATATGATCACTTTTTTGAGATCCACTAGATTCAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTCTGATATGATCACTTTTTTGAGATCCACTAGATTCAAAGAT  800

seq1  ACTTAAGAACTTTTCATCAATTTTCAAGTGGTAATGAAAAAGCAAACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAACTTTTCATCAATTTTCAAGTGGTAATGAAAAAGCAAACAAA  850

seq1  AAGAACTAAGTTGTGTAAGATACAGAAATAAGCAACCAAAAAGCATTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAAGTTGTGTAAGATACAGAAATAAGCAACCAAAAAGCATTCAA  900

seq1  GAACAGAGAGCAAATAGTGCATGCTTATTCCGTAACCTCAGTACTCAGGA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAACAGAGAGCAAATAGTGCATGCTTATTCCGT-ACCTCAGTACTCAGGA  949

seq1  TGAGACAAGATCAGATATTTATGCCAGACTGGGCTAAACA-GAAAGACGT  999
      |||||| |||||||||||||||||||||||| |||||||| |||| ||||
seq2  TGAGAC-AGATCAGATATTTATGCCAGACTGCGCTAAACAGGAAAAACGT  998

seq1  CTCCAAAAAAGGGGGGAGACGGGACTGAAAAGATGGCTCAGCTGTTATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAAAGGGGGGAGACGGGACTGAAAAGATGGCTCAGCTGTTATGA  1048

seq1  GCACT-GAGC-TCTTT-ATGAGGCCCAG-AGTTTAGATCCTAGCACCC-A  1094
      ||||| |||| ||||| ||||||||||| ||||||||| ||||||||| |
seq2  GCACTGGAGCTTCTTTAATGAGGCCCAGAAGTTTAGATTCTAGCACCCAA  1098

seq1  TGTG-ACAA-GCCAGGTCG-CTGCACTCTGTAAATGCCTATAACTAGA  1139
      |||| |||| ||||||||| | ||||||||||||||||||||||||||
seq2  TGTGAACAAGGCCAGGTCGCCGGCACTCTGTAAATGCCTATAACTAGA  1146