BAC Information

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BAC

Clone NameB6Ng01-123C17
Chromosome3 (Build37)
Map Location 64,059,741 - 64,060,367
singlet/doubletsinglet
Overlap gene4930518C23Rik
Upstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739
Downstream geneEG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123C17.bB6Ng01-123C17.g
ACCDH926410DH926411
length8851,046
definitionDH926410|Mus musculus domesticus DNA, BAC clone: B6Ng01-123C17, 5' end.DH926411|Mus musculus domesticus DNA, BAC clone: B6Ng01-123C17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtggactgtatcttggttattttgtacttttggggggggtata
ttgacttactagtgagtacattccatgactttccttttgggtctgagtta
ccctcactcaggatgatattttctagttccatccatttgccttcaaaact
caggatgccatcattcttaatagctgagtagtattccagtgtgtaaatga
accagattttctgtatccatttttctgtagtggggcatctgggctatttc
cagttcctggctatctcaaacaagactgctatgaacatagtggaacatgt
gcccctgtggcatggtgaggcattttttgggggggggggtatattcccaa
gagtggtattgcgggtgttgggatagccctggggctaattatatttgatg
ttaattctgttctcctgtgagaggctttgaacaaggaatgagtcatcact
caggtgacttcctgtaaacctgcttcctaccttaatttctaaaataaagg
aaagctgatgattgggcagataaaaaggaaggtgaagtagaaagtgtgga
gagggaagaaggagaaaatggacgagggaggagacacagaggaagaggag
gaagaagaagaaaagcagagcagaagcacatggcctagagaaactgcagt
tctaaggggtctcatagatgtggaagatactagtttagaagtagatttgc
tcatctatgtgcccagcatgtaatcatattaactgagtcctgttttcatt
gctggggcaaacttggggatcaagagatttactgcaacacctggtcttca
ggtagttctattttccaatttctggacaaactccagattgatttccagag
ttattgtaccagtttaccatccccaccagcaactt
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttccgtatattaaacc
atctctgcatccctggaataagacctacttggtccggatggatgattgct
ttaatgtgttcttggattcggttagtgagaattttattgagtatatttgc
atcaatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctttggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccttctaactctattttgtggaatagtttgtggagaactgg
aattagatcttctctgaaggtctgatagaactctgcactaaacccagtct
attgtatagtgcaccttccccctaggccattgtaaatacttgggtatggg
tgtaactcagctatctatagttctaagtatctattctggttcctctttag
gtcacaaacttccttcttcctagatcatggtaaatttctgtgtagggcag
tgacttagctatccatgcccagggtcagatcaaggactgcctagaatcta
acttagctatatgttaaaatatcaatccttacaatcactttgtaaaaaag
caatattaagggaaagtacacagatccatttaccactaaagcaaagacat
tggagtattcattatacagggatgccacgattccaagacgcttagtttct
gtgaactttttgcctcaggacggttgcccaggttttttggggcctggcga
gcttgtcatactggagtggatgtagcagaagagtactggtattgggtctt
ctttgaaggcagagtggaggagacaaagaacaggtaaatagaaaacagca
gcatcttcgtgcaaggaaggggccaggaagaattcctccagttctctgca
tcccttcctgactctagatcctgtgccctctgactggaatccctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64059741_64060367
seq2: B6Ng01-123C17.g_489_1115

seq1  GTCTGATAGAACTCTGCACTAAACCCAGTCTATTGTATAGTGCACCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATAGAACTCTGCACTAAACCCAGTCTATTGTATAGTGCACCTTCC  50

seq1  CCCTAGGCCATTGTAAATACTTGGGTATGGGTGTAACTCAGCTATCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGCCATTGTAAATACTTGGGTATGGGTGTAACTCAGCTATCTATA  100

seq1  GTTCTAAGTATCTATTCTGGTTCCTCTTTAGGTCACAAACTTCCTTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAGTATCTATTCTGGTTCCTCTTTAGGTCACAAACTTCCTTCTTC  150

seq1  CTAGATCATGGTAAATTTCTGTGTAGGGCAGTGACTTAGCTATCCATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCATGGTAAATTTCTGTGTAGGGCAGTGACTTAGCTATCCATGCC  200

seq1  CAGGGTCAGATCAAGGACTGCCTAGAATCTAACTTAGCTATATGTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCAGATCAAGGACTGCCTAGAATCTAACTTAGCTATATGTTAAAA  250

seq1  TATCAATCCTTACAATCAC-TTGTAAAAAAGCAATATTAAGGGAAAGTAC  299
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATCAATCCTTACAATCACTTTGTAAAAAAGCAATATTAAGGGAAAGTAC  300

seq1  ACAGATCCATTTACCACTAAAGCAAAGACATTGGAGTATTCATTATACA-  348
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACAGATCCATTTACCACTAAAGCAAAGACATTGGAGTATTCATTATACAG  350

seq1  GGATGCCACGATTCCAAGACGCTAAGTTTCTGTGAACTTTTTGCCTCAGG  398
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGATGCCACGATTCCAAGACGCTTAGTTTCTGTGAACTTTTTGCCTCAGG  400

seq1  ACGG-TGCCCAGG-TTTTTGGGGCCTGGCGAGCTTGTCATACTGGAGTGG  446
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACGGTTGCCCAGGTTTTTTGGGGCCTGGCGAGCTTGTCATACTGGAGTGG  450

seq1  ATGTAGCAGAAGAGTACTGGTATTGGGTCTTCTTTGAAGGCAGAGT-GAG  495
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGTAGCAGAAGAGTACTGGTATTGGGTCTTCTTTGAAGGCAGAGTGGAG  500

seq1  GAGACAAAGAACAGGTAAATAGAAAACAGCAGCATCCTCAGTGCCAGGAA  545
      |||||||||||||||||||||||||||||||||||| || |||| |||||
seq2  GAGACAAAGAACAGGTAAATAGAAAACAGCAGCATCTTC-GTGCAAGGAA  549

seq1  GGGGCCAGAATGAATTCCTTCATGTTCTCTGCATCCCTTCCTGACTCTAG  595
      |||||||| | |||||||| || |||||||||||||||||||||||||||
seq2  GGGGCCAGGAAGAATTCCTCCA-GTTCTCTGCATCCCTTCCTGACTCTAG  598

seq1  ATTCCTGTGCACTCCTGACCTGAAATCCCTCA  627
      | |||||||| || |||| ||| |||||||||
seq2  A-TCCTGTGCCCT-CTGA-CTGGAATCCCTCA  627