BAC Information

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BAC

Clone NameB6Ng01-123G01
Chromosome3 (Build37)
Map Location 41,059,187 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123G01.bB6Ng01-123G01.g
ACCDH926556DH926557
length9811,209
definitionDH926556|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G01, 5' end.DH926557|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagattctttctcaatctgttggtggcct
ttatgtcttattgacagtgtctttcgccttgcagaagctttgcaatttca
tgaggttccatttgtcgattctccatcttacagcacaagccattgctgtt
ctattcaggaattttccccctgtacccatatcctcgagactttcccccac
tttctcctctataagtttcactgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaagtcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactgaatggctttagctcccttgtcgaagatcaaat
gaccacaggcgtgtggattcatttttgggtcttcaattttattccattgt
tctacttgtctgtcgctataccagaaccatgcagtttttttttcacatat
tgctctgtagtacagctttaggtcaggcatggtgatttcaccagaggttc
ttttatccttgagaagagtttttgctatcctaggttttttgttattccag
atgaatttgcagattgtcctttctaattcattgaagaattgagttggaat
ttttatggggattgcattgtatctgtagattgcttttggccagagagcta
tttttactatattgattctgccaatccatgagcatgggagatctttccat
cttctgagatcttctttaatttctttcttcagacacttgaagttcttatc
atatagatctttcacttccttagttagagtcacaccaagttagtttatat
tatttgtgactattgagaggtgttgtttccc
gaattcctaaacctgataaacaacttcagtgaagtagctggatataaaat
taactcaaacaaatcagtggcctttctctacacaaaagataaacaggctg
agaaagaaattggggaaacaacacccttctcaatagtcacaaataatata
aaataccttggtgtgactctaagaaagtgaaagatctgtatgataaaaac
ttcaagtctctaaagaaagaaatcaaagaagatctcagaagatgaaaaga
tctcccatgatcatggattggcagaattaatatagtcaaaatggttatct
tgctgaaagcaatctacagattcaatgcaatccccatcaaaatttcaact
caattctttacagagttagaaagggcaatttgcaaattcttctggaataa
cagaaaacctattctcaacaataaaagaacctctggtggaatccccagac
catccccgacctcacgctgtactatagagcaattgtgataaaacaaaaca
aacctgtgtggtactggtatagtgccagacaggtagataaatggaataga
attgaagacccagaaatgaacccacacacctatggtcacttgatctttga
caaaggagctaaaaccatcgagtggaaaaaagacagcattttcaacaaat
ggtgctggcacaactggtagttatcatgtagaagaatgtgaattgatcca
ttcttatttccttgcacaaagctcaagtctaagtggatcaaggaacttca
cataaaaccagagatattgaaacttatagaggagaaagtggggaagaacc
tcgaagatatgggcacagggggaaaattcctgaataaaacagcaatggct
tgtgctgtaagatcaagaatcaacaaatgggatctcataaaattgcaagc
ttttgtagacagaggacacagtcaatagacaaaatggcagtcacagtttg
ggaaagatctttaccatcctaaatcaaatagtggctatttccatatatat
tatgatcaagaagctgactcggaaaacagtaccctattaaatggggtacg
agctaacaagatcttcacctggagaataacaatggctgagagacctaaaa
tgctcacatcctttactcagcaatgcagtcacacatcctggaggtccctc
cagacttgaatgacggaatatcagtgtacaagaaaaccccctcatgtttg
tgggataag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059187_41059737
seq2: B6Ng01-123G01.b_44_595 (reverse)

seq1  AGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACACCTATG  50
      ||| |||||||||| |||||||||| || ||| |||||||||| ||| ||
seq2  AGAACAATGGAATAAAATTGAAGACCCAAAAATGAATCCACACGCCTGTG  50

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGAC  100
      |||| |||||||||||||||||||||||| |||| |||||||||||||||
seq2  GTCATTTGATCTTCGACAAGGGAGCTAAAGCCATTCAGTGGAAAAAAGAC  100

seq1  AGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  150
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AGCATTTTCAACAAATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAG  150

seq1  AATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  200
      ||||||| |||||||| |||||||||||||||||||||||||||||||||
seq2  AATGCGACTTGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  200

seq1  GGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  250
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  GGATCAAGGAACTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAG  250

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCA  300
      ||||||||| |||| || || |||||||  ||||||| |||||||||| |
seq2  AAAGTGGGGGAAAGTCTCGAGGATATGGGTACAGGGGGAAAATTCCTGAA  300

seq1  TAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACC  350
      ||||||||||||||||||||||||||||| |||||| ||||||||| |||
seq2  TAGAACAGCAATGGCTTGTGCTGTAAGATGGAGAATCGACAAATGGAACC  350

seq1  TCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACA  400
      |||||||| ||||||||||||||||||| |||||||| ||||||||||||
seq2  TCATGAAATTGCAAAGCTTCTGCAAGGCGAAAGACACTGTCAATAAGACA  400

seq1  AAAAGG-CACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGA  449
       ||||| ||||||||||||| ||||| |||||||||||||||||||||||
seq2  TAAAGGCCACCAACAGATTGAGAAAGAATCTTTACCTATCCTAAATCAGA  450

seq1  TAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCA  499
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCA  500

seq1  GAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAA  549
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAAATCAAATAACCCCATTTAAAAATGGGGCTCAGAGCTAAACAAAGAA  550

seq1  TT  551
      ||
seq2  TT  552