BAC Information

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BAC

Clone NameB6Ng01-124A04
Chromosome3 (Build37)
Map Location 49,705,251 - 49,705,651
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666230, 4932443G14, LOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18
Downstream geneLOC100039628, LOC639469, Slc7a11, EG621304, LOC100039667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124A04.bB6Ng01-124A04.g
ACCDH927027DH927028
length1,221395
definitionDH927027|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A04, 5' end.DH927028|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaatcctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatgggtattgcattgaatctgtagattgcttttggcaagatcgccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcacgccgagatattttatattatt
tgtgactattggagaaggtgttggtttccctaatttctttcctcagcctg
tttattcttttgtgtagagaaagtcattgacctgttggagttaatttaat
tccagcctacttcaccgaagcgtgttattcaggtttaggagatcctcggt
ggaattttagggtgcactttataatcaacacaaacaatcgcccgaaaaga
gagatatggagcttcccgttcaattggaaccctgactccctttgttggca
atgctcgcgctaatcctagta
atgaaagatcctcctgagagaaattggacaggatttccatgtttggcaaa
taaaatgtaggaaactctttttagcattaaaaataccctatgaaatattt
aaaacatacttatcttaaagctatttgctctgtgtttgaaattcatctac
aactgactcttctctctgtctctgaaaaccataatattgatattaaaaaa
tagatccacgagcaactctggaatttatgaacactattatagaacagcca
aacttgaagtttgttctcagtctgtggaggatgggtgtattagtcagcct
taaatacttcaggatatcaatttaagaagcagaaaataatatttagaaat
atattttgagggtgggttgatgagcagagggagagggggatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49705251_49705651
seq2: B6Ng01-124A04.g_67_467

seq1  GAATTCATGAAAGATCCTCCTGAGAGAAATTGGACAGGATTTCCATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAAGATCCTCCTGAGAGAAATTGGACAGGATTTCCATGTTT  50

seq1  GGCAAATAAAATGTAGGAAACTCTTTTTAGCATTAAAAATACCCTATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATAAAATGTAGGAAACTCTTTTTAGCATTAAAAATACCCTATGAA  100

seq1  ATATTTAAAACATACTTATCTTAAAGCTATTTGCTCTGTGTTTGAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAACATACTTATCTTAAAGCTATTTGCTCTGTGTTTGAAATTC  150

seq1  ATCTACAACTGACTCTTCTCTCTGTCTCTGAAAACCATAATATTGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAACTGACTCTTCTCTCTGTCTCTGAAAACCATAATATTGATATT  200

seq1  AAAAAATAGATCCACGAGCAACTCTGGAATTTATGAACACTATTATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGATCCACGAGCAACTCTGGAATTTATGAACACTATTATAGAA  250

seq1  CAGCCAAACTTGAAGTTTGTTCTCAGTCTGTGGAGGATGGGTGTATTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAACTTGAAGTTTGTTCTCAGTCTGTGGAGGATGGGTGTATTAGT  300

seq1  CAGCCTTAAATACTTCAGGATATCAATTTAAGAAGCAGAAAATAATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTAAATACTTCAGGATATCAATTTAAGAAGCAGAAAATAATATTT  350

seq1  AGAAATATATTTTGAGGGTGGGTTGATGAGCAGAGGGAGAGGGGGATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATATTTTGAGGGTGGGTTGATGAGCAGAGGGAGAGGGGGATGGG  400

seq1  A  401
      |
seq2  A  401