BAC Information

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BAC

Clone NameB6Ng01-124B03
Chromosome3 (Build37)
Map Location 62,630,502 - 62,631,640
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669910, LOC676965, 4631416L12Rik, Dhx36, Gpr149
Downstream geneLOC676984, LOC666967, Mme, Plch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B03.bB6Ng01-124B03.g
ACCDH927071DH927072
length1,1341,236
definitionDH927071|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B03, 5' end.DH927072|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggtgaaatttagttggaaaatatggtctttatctcagggag
gccagatattctgcccctacttctgagctctgatattattgtgtgcacat
gcctatgtcaccctcatgtacatgagagaaattcaaaatagctaaccata
ggtcttactacacacattgcagcaaagagtattcactatactatcttgag
catggtaatgacatcattcttcaaaatgtacattcagcagatctataagg
cagtgttgtgtgtaagcaccagttcttgatactaaacagtggtgaaaaat
aggaaacatggagagttgttgacaagcaactacagtgtaaccagcactag
tgagcaggcccttagctaagtgtatgtagaaatccatggagttgcaggac
aggagtacatgaaggtgctttcaagttgtaaagaaacaaaaaacaggagg
catcttgagtgagagataagaagaacaatcttgtctttagagctgttgat
ttacagaatccagggaaagaagtgatttgggaagctggaaccagagtcta
cagctcagaaagtggaaacagaaaatgagggctgtggattgcagagacat
ggcacatcctatatcaattccaggacaccaagaagaggctcagtcagtga
cctctttatttttatgtttcctttcatcaattagaattatattgttagcc
agctcacaccttaatcccagcactcgggaggtagaggcaggtaaatttct
gagttcaaggccagcctgatctacagactgagttccaggacagccagggc
tacacagagaaacactgtctcaaaaaaaaaaaagaataaaagaattatat
tggctattcaggtaaaatcgcccattgaataaactactagaacactttgg
acaaatctctactttgcagctattttggtgcagaacaccacagtgactgt
cacagtaaccttgaaatctccctacattttccacttatgcttctcacaaa
tgaggcatttggcccctcttgactacagtctgccgtgaatgcttttgcct
cttgtctactattttcttcagaattcctccttctcctcatccacgaatca
catgtaccggacctctttcccatgcaatcaccac
gaattccacataaaaccagaaacactgaaacttatcgaggagaaagtagg
gaaaaccctcgaagatatgggcacattggaaaaattcctgaattgaacac
cagtggcttgtactgtaagatggagaattgacaaatgggacctcatgaaa
ctgcaaatcttttgcaaagcaaaagacactgtcaataagacaaaaaggcc
accaacagattgggaaagtatctttacctatcctaaatcagataggggac
taatatccaatatatataaagaactcaagacagtggactctagaaaatca
aataaccccattaaaaaatggggctcagagctaaacaaagaattctcacc
tgaggaataccaaatggctgagaaccacctgaaaaaatgttcatcatcct
taatcatcagagaaatgcaaatcaaaacaaccctgagattccacctcaca
ccagtcagaatggctaagatcaaaatttcaggtgacagcagatgctggcg
aggatgtggagaaagaggaacactcctccattgttggtgggattgcaagc
ttgtacaaccattctggaaatcagtctggtgcttactcagaaaactggat
atagtactactggaggatcctgcaatacctctcttgggcatataccaata
agatattccaactggtaaggacacatgctccactatgttcatagcagcct
tatttataatggccataagctggaaagaacccagatgcccctcaacagag
gaatggatacagaaaatgtggtacatttacccaatggagtactactcagc
tattaaaaagaatgaatttatgaaattcctaggcaaatggatggacctgg
agggtatcatcctgagttaggtaacccaatcacaaaggaacttaggactt
acacaatatgtactcactgataagtggatatagcccagaaacttaggata
ccagatattagatacatttgctaaagcatgaaactcaagagatgagactg
agtgttgacactatgccccttcttagaaattggaacaaaacacccatgaa
gaagttacagagaaaagtttggagctgtgttcaaagattgaacaattctt
taggctgcatgtcagaagttcatctcataaacaactcactttgacacaat
tgtcatacacatagcagattgcgtaggacgatagtcggtcctgggaactt
gtgccggtctcatcgtccacacatactacatgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_62630502_62631640
seq2: B6Ng01-124B03.b_44_1177

seq1  GAATTCACTGGTGAAATTTAGTTGGAAAATATGGTCTTTATCTCAGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGTGAAATTTAGTTGGAAAATATGGTCTTTATCTCAGGGAG  50

seq1  GCCAGATATTCTGCCCCTACTTCTGAGCTCTGATATTATTGTGTGCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATATTCTGCCCCTACTTCTGAGCTCTGATATTATTGTGTGCACAT  100

seq1  GCCTATGTCACCCTCATGTACATGAGAGAAATTCAAAATAGCTAACCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGTCACCCTCATGTACATGAGAGAAATTCAAAATAGCTAACCATA  150

seq1  GGTCTTACTACACACATTGCAGCAAAGAGTATTCACTATACTATCTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTACTACACACATTGCAGCAAAGAGTATTCACTATACTATCTTGAG  200

seq1  CATGGTAATGACATCATTCTTCAAAATGTACATTCAGCAGATCTATAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAATGACATCATTCTTCAAAATGTACATTCAGCAGATCTATAAGG  250

seq1  CAGTGTTGTGTGTAAGCACCAGTTCTTGATACTAAACAGTGGTGAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTGTGTGTAAGCACCAGTTCTTGATACTAAACAGTGGTGAAAAAT  300

seq1  AGGAAACATGGAGAGTTGTTGACAAGCAACTACAGTGTAACCAGCACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACATGGAGAGTTGTTGACAAGCAACTACAGTGTAACCAGCACTAG  350

seq1  TGAGCAGGCCCTTAGCTAAGTGTATGTAGAAATCCATGGAGTTGCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGGCCCTTAGCTAAGTGTATGTAGAAATCCATGGAGTTGCAGGAC  400

seq1  AGGAGTACATGAAGGTGCTTTCAAGTTGTAAAGAAACAAAAAACAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACATGAAGGTGCTTTCAAGTTGTAAAGAAACAAAAAACAGGAGG  450

seq1  CATCTTGAGTGAGAGATAAGAAGAACAATCTTGTCTTTAGAGCTGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGAGTGAGAGATAAGAAGAACAATCTTGTCTTTAGAGCTGTTGAT  500

seq1  TTACAGAATCCAGGGAAAGAAGTGATTTGGGAAGCTGGAACCAGAGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAATCCAGGGAAAGAAGTGATTTGGGAAGCTGGAACCAGAGTCTA  550

seq1  CAGCTCAGAAAGTGGAAACAGAAAATGAGGGCTGTGGATTGCAGAGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGAAAGTGGAAACAGAAAATGAGGGCTGTGGATTGCAGAGACAT  600

seq1  GGCACATCCTATATCAATTCCAGGACACCAAGAAGAGGCTCAGTCAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCTATATCAATTCCAGGACACCAAGAAGAGGCTCAGTCAGTGA  650

seq1  CCTCTTTATTTTTATGTTTCCTTTCATCAATTAGAATTATATTGTTAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTATTTTTATGTTTCCTTTCATCAATTAGAATTATATTGTTAGCC  700

seq1  AGCTCACACCTTAATCCCAGCACTCGGGAGGTAGAGGCAGGTAAATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACACCTTAATCCCAGCACTCGGGAGGTAGAGGCAGGTAAATTTCT  750

seq1  GAGTTCAAGGCCAGCCTGATCTACAGACTGAGTTCCAGGACAGCCAGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAGGCCAGCCTGATCTACAGACTGAGTTCCAGGACAGCCAGGGC  800

seq1  TACACAGAGAAACACTGTCTCAAAAAAAAAAAAGAATAAAAGAATTATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACACTGTCTCAAAAAAAAAAAAGAATAAAAGAATTATAT  850

seq1  TGGCTATTCAGGTAAAATCGCCCATTGAATAAACTACTAGAACACTTTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTCAGGTAAAATCGCCCATTGAATAAACTACTAGAACACTTTGG  900

seq1  ACAAATCTCTACTTTGCAGCTATTTTGGTGCAGAACACCACAGGTGACTG  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACAAATCTCTACTTTGCAGCTATTTTGGTGCAGAACACCACA-GTGACTG  949

seq1  TCACAGGTAACCTTGAAATCTCCCTACATTTTCCACTTATGCTTCTCACA  1000
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACA-GTAACCTTGAAATCTCCCTACATTTTCCACTTATGCTTCTCACA  998

seq1  AATGAGGCATTTGGCCCCCTCTTGACTACAGTCTGCCGTGGAATGGCTTT  1050
      |||||||||||||| |||||||||||||||||||||||| |||||   ||
seq2  AATGAGGCATTTGG-CCCCTCTTGACTACAGTCTGCCGT-GAATG--CTT  1044

seq1  TTGCCTCTTGTCTACTATTTTCTTCAGAATTCCTCCTTCTCCTCATCCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTTGTCTACTATTTTCTTCAGAATTCCTCCTTCTCCTCATCCAC  1094

seq1  GAATCACATGTACCGGA-CTCTTTCCCATGCCATCACCAC  1139
      ||||||||||||||||| ||||||||||||| ||||||||
seq2  GAATCACATGTACCGGACCTCTTTCCCATGCAATCACCAC  1134