BAC Information

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BAC

Clone NameB6Ng01-124G09
Chromosome3 (Build37)
Map Location 26,406,981 - 26,408,054
singlet/doubletsinglet
Overlap genenone
Upstream geneNlgn1, LOC621017, LOC229152
Downstream geneSpata16, LOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124G09.bB6Ng01-124G09.g
ACCDH927316DH927317
length1,2101,075
definitionDH927316|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G09, 5' end.DH927317|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagccagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccgaggttcactcaccttgcagggcttagtagtccaccc
tggaattatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacaccccatcagagggtattcagctaaagcaaaaatatcatggcaaa
gatgggttataaagaaggaaaagggttaggacatcaagaacaggaagata
gagcccatctcacctaatggaaaccaagacagacaaggtctgggtttcct
tagcgccattgggcagcaccgacccataccatggaaaccaaggaccaatg
tggttcttcaatgcactatcctctgaaaactagaagctgtgattcacctg
ttaaggaacattaaaatagtcaattgtacccctaccctccttgaaatccc
aatttgcttaaaaaaggccggaatggagatcttccttgactcgagccatt
atagtccatgattattggccgatacaaagggtccttgactcccgcttacc
ctgacctgat
gaattccacctttccttaggttttgaattatcccttccttttcataccac
atggacttcgaagcagcatttaccagattctatttgttgttgttcaaaaa
aaaatctaaaatctgctatattttttcttaaaataaatcctatattttta
tatttcaataatatgcttaatggacagtactgacttttcttcaatctcaa
tctatggggaggttttactgattgatgaattgttagaccttgtgatctga
ctttataaaaattagagttgctcacatttaaaggatgttaaatcttttca
gccataatatgaaacttcagccttgtgaggtttgaatgctaaggaaataa
tcttctttctctgagttaacgtggccttttctatacactgttttcaaatg
ccatattcagagttatctaaaaccatttcttcctactagtgaaattccac
atcgccagtgttgggaaatgtcactctaatggaacattcagcatgttggg
tattgttttaacttgtaagtgtagacaatcccaaggtgctatatagataa
agatataaggaagttaggagttcatatacatataaatagcctcaaaatta
gaccttcaagtgcaaattgtatttccacagtggctccttcctgccttgtg
tgcatgccaggtcttttacctgtgctccacctttctgccttgtgtgcttg
gcaggtctttaccatctttaccgctgatacatctttttcttcttttgtgt
tctgaaattctcctcctgtgactttcatttgacttgccccattttctttc
ttaggtctaagacccagagtctctcagtttatcctttgtctaccctctct
agattacactcctatgtttagtatttcctagatatctttgcctccttact
tgctttcttacatttacacagactctacactctatgaaagcaggcttctt
attatgctttcaatcacattgcttatccctgcccaataattgctcttcgt
agataaagcattcagtaccataatactcagtaaaggtgattccctctgaa
agagtgtttatatttgttggtggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26406981_26408054
seq2: B6Ng01-124G09.g_69_1143 (reverse)

seq1  GTCCACCAAACAAATAAAACAACTCTTTCA-AGAGAATTCAC--TTACTG  47
      ||||||| |||||||| ||  ||||||||| || ||| ||||  ||||||
seq2  GTCCACC-AACAAATATAAACACTCTTTCAGAGGGAA-TCACCTTTACTG  48

seq1  AGTATATAT-GTACTGAATGCTTTATCCTACGAAGAGCAA-TATTGGGGC  95
      ||||| ||| |||||||||||||||| ||||||||||||| |||||||  
seq2  AGTAT-TATGGTACTGAATGCTTTAT-CTACGAAGAGCAATTATTGGGCA  96

seq1  AGGATAAGCAATGTGATTGAAAGCAATAATAAGAAGCCTTGCCTTCATAG  145
       ||||||||||||||||||||||| ||||||||||||| ||| |||||||
seq2  GGGATAAGCAATGTGATTGAAAGC-ATAATAAGAAGCC-TGCTTTCATAG  144

seq1  AGTGTAGAGTCTGTGTAAATGTAAAGAAAGCAAGTAAGGAGGCAAAGAAT  195
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  AGTGTAGAGTCTGTGTAAATGT-AAGAAAGCAAGTAAGGAGGCAAAG-AT  192

seq1  ATCTAGGAAATACTAAACATAGGAGTGTAATCTAGAGAGGGTAGAC-AAG  244
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCTAGGAAATACTAAACATAGGAGTGTAATCTAGAGAGGGTAGACAAAG  242

seq1  GATAAACTGAGAGACTCTGGGTCTTAGACCTAAGAAAGAAAATGGGGCAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACTGAGAGACTCTGGGTCTTAGACCTAAGAAAGAAAATGGGGCAA  292

seq1  GTCAAATG-AAGTCACAGGAGGAGAATTTCAGAACACAAAAGAAGAAAAA  343
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATGAAAGTCACAGGAGGAGAATTTCAGAACACAAAAGAAGAAAAA  342

seq1  GATGTATCAGCGGT-AAGATGGTAAAGACCTGCCAAGCACACAAGGCAGA  392
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GATGTATCAGCGGTAAAGATGGTAAAGACCTGCCAAGCACACAAGGCAGA  392

seq1  AAGGTGGAGCACAGGT-AAAGACCTGGCATGCACACAAGGCAGGAAGGAG  441
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGGTGGAGCACAGGTAAAAGACCTGGCATGCACACAAGGCAGGAAGGAG  442

seq1  CCACTGTGGAAATACAATTTGCACTTGAAGGTCTAATTTTGAGGCTATTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGGAAATACAATTTGCACTTGAAGGTCTAATTTTGAGGCTATTT  492

seq1  ATATGTATATGAACTCCTAACTTCCTTATATCTTTATCTATATAGCACCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATATGAACTCCTAACTTCCTTATATCTTTATCTATATAGCACCT  542

seq1  TGGGATTGTCTACACTTACAAGTTAAAACAATACCCAACATGCTGAATGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGTCTACACTTACAAGTTAAAACAATACCCAACATGCTGAATGT  592

seq1  TCCATTAGAGTGACATTTCCCAACACTGGCGATGTGGAATTTCACTAGTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAGAGTGACATTTCCCAACACTGGCGATGTGGAATTTCACTAGTA  642

seq1  GGAAGAAATGGTTTTAGATAACTCTGAATATGGCATTTGAAAACAGTGTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAATGGTTTTAGATAACTCTGAATATGGCATTTGAAAACAGTGTA  692

seq1  TAGAAAAGGCCACGTTAACTCAGAGAAAGAAGATTATTTCCTTAGCATTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGGCCACGTTAACTCAGAGAAAGAAGATTATTTCCTTAGCATTC  742

seq1  AAACCTCACAAGGCTGAAGTTTCATATTATGGCTGAAAAGATTTAACATC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCACAAGGCTGAAGTTTCATATTATGGCTGAAAAGATTTAACATC  792

seq1  CTTTAAATGTGAGCAACTCTAATTTTTATAAAGTCAGATCACAAGGTCTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATGTGAGCAACTCTAATTTTTATAAAGTCAGATCACAAGGTCTA  842

seq1  ACAATTCATCAATCAGTAAAACCTCCCCATAGATTGAGATTGAAGAAAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCATCAATCAGTAAAACCTCCCCATAGATTGAGATTGAAGAAAAG  892

seq1  TCAGTACTGTCCATTAAGCATATTATTGAAATATAAAAATATAGGATTTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTGTCCATTAAGCATATTATTGAAATATAAAAATATAGGATTTA  942

seq1  TTTTAAGAAAAAATATAGCAGATTTTAGATTTTTTTTTGAACAACAACAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAAAAAATATAGCAGATTTTAGATTTTTTTTTGAACAACAACAA  992

seq1  ATAGAATCTGGTAAATGCTGCTTCGAAGTCCATGTGGTATGAAAAGGAAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCTGGTAAATGCTGCTTCGAAGTCCATGTGGTATGAAAAGGAAG  1042

seq1  GGATAATTCAAAACCTAAGGAAAGGTGGAATTC  1074
      |||||||||||||||||||||||||||||||||
seq2  GGATAATTCAAAACCTAAGGAAAGGTGGAATTC  1075