BAC Information

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BAC

Clone NameB6Ng01-124I22
Chromosome3 (Build37)
Map Location 16,753,901 - 16,755,005
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
Downstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124I22.bB6Ng01-124I22.g
ACCDH927434DH927435
length1,1151,096
definitionDH927434|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I22, 5' end.DH927435|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagaccacatgaagctcaagaagaaagaccaaagtgtgagggc
accagtacttcttagaaggggaagaaaatactcaaagaagaatatatgga
gataaagtataaaacagagactgaaggaaaggtcgtccagagactgtccc
acctggggattcatctcatatacagttaccaaacccagacattattgtgg
atgccaagaagtgcatgttgtaaggagcctgatatggctgtctcctgaga
ggccctgctagggccttacaaatacagaggcagattctttcagccaacca
ttgtactgagttcagagtccccaatagaggagttagagaaaggactgaag
gagctgaaggggtttgcaaccccataggaaaaacaacaatatcaaccaac
cagacctccaagagcttccagtgactaagctaccaaccaaagagtacata
tggagggacccatggctccagcagcatatgtaacacaggatggccttgtt
gggcatcattgggagaagaggcccttggtcctgtgaaggcttgatgcccc
agtgtaggggacaggacagcaaagcaggagtggctagatttgtgagcaag
gagagggggaaggggaggctggaggggataccaggaaaggggttaacaat
tgaaatgtaaataaagaaaatatctaataaaaaataaaaggagtgcctgg
agagatagttcagtggttaaaagcactgactgctcttctaaaggtcctgt
gttaaattcccagaaactacatggtggctcacaaccatctgtaaaggtat
ctgatgccctcttctggtgtgtctggacacatctataatgtattcatata
aataaaatatatctttaaaaataatagaataagcaagaacatactggaat
gagttaataaatcattagcctgcttgaagatggtaaaatggatccatttt
cttttttcatttgtcaattgaatcgacgagtttagattcatttttgtatg
ttggaggacgtacttttcaaataccttttagagcaccaaagtcaaaattg
ggtttagaaaagatagtgtggggggatctatcaagtgtcgtggatcgcca
gtggacgccgttaca
gaattctttagtctgaaaacgcatttctgacattctctaggaataaatgt
gaaatgttaatttcctttccccccatgaaaatgaggctaaaaatgtctag
tatagaaatcagaagacaaaatggtttcctctgcatgccttcctgttccc
ttgggtgccatcccccagagccagggtatcagagcaggaattgggggtcc
ctgctctgataattgccagtgactggagggagcaatcctcctcccacact
ctcgccatcctcctcctgtggtgcaataatttacagtgaaggtcgaatca
aagggctttctttattttgcctgtgtgattttgatgttggacacagggag
gcagggcaaagcaatggcagagagcaggcaaaggaaaaacccagcagctg
cccaggacacacatgcacactccctcccagaagaaaatgcatggagcttc
agaactgcctacttaaccgcaagcattcatttcgatacgagagacacatg
agatcatggctccttattttgattttggtccctttaaagttatttcaggt
ttttgagccaatttttctcgtcatcagttttctgtaatcagcttggtttc
tttgagtgcaaagattacacactacatatatatgctgtgtattctattgt
tgaattcttgtctattcaatcagaatcaggatattctttaaaggcagaaa
aaagatttaaaaacaattccacatattgtattgtaaagcagtggtggtat
agtgtgctgaagtattccctagcacacttgtccacaagttgattctatgt
gacatattcacaaagcgtgccatggttcatgaaatgcaagtgctttaggg
tttcttctagcctttttctgtattttaaattccaaacacattcagtgttc
ctgtaacatggtcctttcattcgctttattgtgctgcactctgagagaga
taaaaaattctaaaaacttagaaaaatataaggagcaggtagatttctaa
ggtcactttcagtttcttggaaattttttttcctctgggtatgcactttt
agctctctagaaatggctgtgtttaatgaatcatgatggttgggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16753901_16755005
seq2: B6Ng01-124I22.g_67_1162

seq1  GAATTCTTTAGTCTGAAAACGCATTTCTGACATTCTCTAGGAATAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTCTGAAAACGCATTTCTGACATTCTCTAGGAATAAATGT  50

seq1  GAAATGTTAATTTCCTTTCCCCCCATGAAAATGAGGCTAAAAATGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTAATTTCCTTTCCCCCCATGAAAATGAGGCTAAAAATGTCTAG  100

seq1  TATAGAAATCAGAAGACAAAATGGTTTCCTCTGCATGCCTTCCTGTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAATCAGAAGACAAAATGGTTTCCTCTGCATGCCTTCCTGTTCCC  150

seq1  TTGGGTGCCATCCCCCAGAGCCAGGGTATCAGAGCAGGAATTGGGGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGCCATCCCCCAGAGCCAGGGTATCAGAGCAGGAATTGGGGGTCC  200

seq1  CTGCTCTGATAATTGCCAGTGACTGGAGGGAGCAATCCTCCTCCCACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGATAATTGCCAGTGACTGGAGGGAGCAATCCTCCTCCCACACT  250

seq1  CTCGCCATCCTCCTCCTGTGGTGCAATAATTTACAGTGAAGGTCGAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCATCCTCCTCCTGTGGTGCAATAATTTACAGTGAAGGTCGAATCA  300

seq1  AAGGGCTTTCTTTATTTTGCCTGTGTGATTTTGATGTTGGACACAGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTTCTTTATTTTGCCTGTGTGATTTTGATGTTGGACACAGGGAG  350

seq1  GCAGGGCAAAGCAATGGCAGAGAGCAGGCAAAGGAAAAACCCAGCAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCAAAGCAATGGCAGAGAGCAGGCAAAGGAAAAACCCAGCAGCTG  400

seq1  CCCAGGACACACATGCACACTCCCTCCCAGAAGAAAATGCATGGAGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACACACATGCACACTCCCTCCCAGAAGAAAATGCATGGAGCTTC  450

seq1  AGAACTGCCTACTTAACCGCAAGCATTCATTTCGATACGAGAGACACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCCTACTTAACCGCAAGCATTCATTTCGATACGAGAGACACATG  500

seq1  AGATCATGGCTCCTTATTTTGATTTTGGTCCCTTTAAAGTTATTTCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATGGCTCCTTATTTTGATTTTGGTCCCTTTAAAGTTATTTCAGGT  550

seq1  TTTTGAGCCAATTTTTCTCGTCATCAGTTTTCTGTAATCAGCTTGGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGCCAATTTTTCTCGTCATCAGTTTTCTGTAATCAGCTTGGTTTC  600

seq1  TTTGAGTGCAAAGATTACACACTACATATATATGCTGTGTATTCTATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGCAAAGATTACACACTACATATATATGCTGTGTATTCTATTGT  650

seq1  TGAATTCTTGTCTATTCAATCAGAATCAGGATATTCTTTAAAGGCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTTGTCTATTCAATCAGAATCAGGATATTCTTTAAAGGCAGAAA  700

seq1  AAAGATTTAAAAACAATTCCACATATTGTATTGTAAAGCAGTGGTGGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTAAAAACAATTCCACATATTGTATTGTAAAGCAGTGGTGGTAT  750

seq1  AGTGTGCTGAAGTATTCCCTAGCACACTTGTCCACAAGTTGATTCTATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTGAAGTATTCCCTAGCACACTTGTCCACAAGTTGATTCTATGT  800

seq1  GACATATTCACAAAGCGTGCCATGGTTCATGAAATGCAAGTGCTTTAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTCACAAAGCGTGCCATGGTTCATGAAATGCAAGTGCTTTAGGG  850

seq1  TTTCTTCTAGCCTTTTTCTGTATTTTTAAAATTCCAAAACACATTCAGTG  900
      ||||||||||||||||||||||||||  ||||||| ||||||||||||||
seq2  TTTCTTCTAGCCTTTTTCTGTATTTT--AAATTCC-AAACACATTCAGTG  897

seq1  TTCCTGTAACATGGTCCTTTCATTCGCTTTATTGTGCTGCACTCTTGAGA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCCTGTAACATGGTCCTTTCATTCGCTTTATTGTGCTGCACTC-TGAGA  946

seq1  GAGATAAAAAAATTCTAAAAACTTAGAAAAATAATAAGGAAGCAGTTAGA  1000
      ||||| |||||||||||||||||||||||||| |||||| ||||| ||||
seq2  GAGAT-AAAAAATTCTAAAAACTTAGAAAAAT-ATAAGG-AGCAGGTAGA  993

seq1  TTTCTAAAGTCACTTTCAGTTCCTTGGAAATTTTATTTTCCTCTGTGATG  1050
      ||||||| ||||||||||||| |||||||||||| |||||||||| |   
seq2  TTTCTAAGGTCACTTTCAGTTTCTTGGAAATTTT-TTTTCCTCTGGGTAT  1042

seq1  GCACTTTTAGCTCTAGAAAATGGGCTGTGTTCTAATGAAATCATGAT-GA  1099
      ||||||||||||||  | ||  ||||||||| ||||| ||||||||| | 
seq2  GCACTTTTAGCTCTCTAGAAATGGCTGTGTT-TAATG-AATCATGATGGT  1090

seq1  TGGGAC  1105
      ||||||
seq2  TGGGAC  1096