BAC Information

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BAC

Clone NameB6Ng01-124L14
Chromosome3 (Build37)4 (Build37)
Map Location 71,829,348 - 71,829,89419,496,574 - 19,497,428
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385
Downstream geneLOC100041459, 2010204N08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124L14.bB6Ng01-124L14.g
ACCDH927558DH927559
length961846
definitionDH927558|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L14, 5' end.DH927559|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,829,348 - 71,829,894)(19,496,574 - 19,497,428)
sequence
gaattctggtataattctaataggtctgcctttatatgttacttgacctt
tttcccttactgcttttaatattctatctttatctagtgcatttgttgtt
ctgattattatgtgtcaggaggaatttcttttctggtccagtctatttgg
agttctttaggcttcttgaatgctcatgggcatctctttttttaggtatg
agaagttttcttctctaattttgttgaagatatttacaggcccttaaatt
gaaaaacttcattgtcatctatacctattatccttaagtttgatcttctc
attgtgtcctggatttcctggatgttttgagttagaatccttttgcattt
tgcttttttctttgattgttgtgcccatgttctctatggaatcttctgca
cttgagattttcttttccatctcttgtattctgttgctgatggggatttc
tatctccagagttgtctccctttgagttttctttactgtttctacttcaa
tttttagatcttggatggttttcttcagttccttcacctgtttggttttg
ttttcctgtaattctttaagggattttttgtgtttcttctttaagggttt
ctacctctttagctgtgttcgtctgtatttctttaagtgagttattaatg
cccttctttaaattctctaccagcatcatgagatatgattttaaatccaa
atcttgctttttgggtgtgttggtgtatccaggactcgccgtggtgggag
tactggtttctgatgatgccaagtagccttggtttctgttaggaagattt
ttatgtttgcctttcacaatctggtaatctctggtgttagatgttttagt
tgtctctggctggaactttttccttctgtgattctgttagcctctgtcag
cactcctgagagactagctctctcctgagtcccaggggtcacagcattcc
ctggaaggcaa
gaattctttaaaaggtcagcgggttgaggcgcagcaaagaaaactgggag
tgaaaatgggttgaaatgggttgggcagcaagctccctatcaaaagcaaa
acttcaccttggtcccgcccacaagctccgccctcgcccctccgctccgg
gactccgcccacgagccccgcccctccgcggtccagccctcaggttccag
taaagcccctgcggtcctgccgccttgcggtgctcctcgctggctctcca
ccctcactcgacttctgcggcgatatagcacgtgagtgcgtgacttttcc
cagctccggagccgtgtgtcccagcccaagcctgcagcctcccgggaagc
gggccggtcccgggcgggaagacttagggccctcaggcttccatggcccg
tccctccgggccccgggcgctggaagtgctccgtgggtttccggtgccca
ctctggggactcccgagtgtcgcgtgctgggtccgcggcccgtggaagtc
cggggctgggggtcagcctgggggccgcgagcgcctcctgggcctgcggc
tcgcgcacctgaagaacctgccggggatccgcgggcctcgagtggaaggg
cagggtggggcgaagggttacagccccgaaatctcggtcccgctcagcgg
ggaaagattggtgaaccagacgaaccggtcgtgtgggggaacggtggagg
aaagctgcgtgctgagggaaaagtgctactgattcggtgcaagctgggcc
tgggtgaagtcctagcagctcctgcactgtgtccagggctttgggctcac
tgcacacgcgacgcgaggagggcagtgccacttacttgtttgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71829348_71829894
seq2: B6Ng01-124L14.b_74_590 (reverse)

seq1  CCAAACAGGTGATGGAAATGAACAAAACCATACTAGAACTAAAAGGGGAA  50
      |||||||||||| |||| |||| |||||||| | ||| ||||||   |||
seq2  CCAAACAGGTGAAGGAACTGAAGAAAACCATCCAAGATCTAAAAATTGAA  50

seq1  GTAGACACAATAAAGAAAACCCAAAGCGAGGCAACGCTGGAGATAGAAAT  100
      ||||| ||| |||||||||| ||||| ||| |||| ||||||||||||||
seq2  GTAGAAACAGTAAAGAAAACTCAAAGGGAGACAACTCTGGAGATAGAAAT  100

seq1  CCTAGGAAAGAGATCTGGAACCATAGATGCGAGCATCAGCAACAGAATAC  150
      ||                               |||||||||||||||||
seq2  CC------------------------------CCATCAGCAACAGAATAC  120

seq1  AAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATC  200
      |||| |||||| ||| ||||||| ||||||||||||||||||||||||| 
seq2  AAGAGATGGAAAAGAAAATCTCAAGTGCAGAAGATTCCATAGAGAACATG  170

seq1  GACACAACAGTCAAAGAAAATA-CAAAATGCAAAAGGATCCTAACTCAAA  249
      | ||||||| |||||||||| | |||||||||||||||| ||||||||||
seq2  GGCACAACAATCAAAGAAAAAAGCAAAATGCAAAAGGATTCTAACTCAAA  220

seq1  ACATCCAGGTAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATA  299
      ||||||||| |||||||||||||||||||||| ||||| || ||||||||
seq2  ACATCCAGGAAATCCAGGACACAATGAGAAGATCAAACTTAAGGATAATA  270

seq1  GGAATTGATGAGAATGAAGATTTTCAACTTAAAGGGCCAGCTAATATCTT  349
      || || ||||| ||||||| ||||||| || ||||||| |  ||||||||
seq2  GGTATAGATGACAATGAAGTTTTTCAA-TTTAAGGGCCTGTAAATATCTT  319

seq1  CAACAAAATAATAGAAGAAAACTTCCCAAACATAAAAAAAGAGATGCCCA  399
      ||||||||| | ||||||||||||| || || ||||||||||||||||||
seq2  CAACAAAATTAGAGAAGAAAACTTCTCATACCTAAAAAAAGAGATGCCCA  369

seq1  TGATCATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGA  449
      ||| ||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  TGAGCATTCAAGAAGCCTAAAGAACTCCAAATAGACTGGACCAGAAAAGA  419

seq1  AATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAATAAAGA  499
      ||||||||| |||||||||||||||||||||||||||||||| |||||||
seq2  AATTCCTCCTGACACATAATAATCAGAACAACAAATGCACTAGATAAAGA  469

seq1  TAGAATATTAAAAGCAGTAAGGGAGAAAGGTCAAGTAACATATAAAGG  547
      |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGAATATTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGG  517

seq1: chr4_19496574_19497428
seq2: B6Ng01-124L14.g_69_913 (reverse)

seq1  CTGCAAAACAAGTAAGTGGCACTGCCCTTCCTTCGCGTCGCGTGTGCAGT  50
      |||| |||||||||||||||||||||||  | ||||||||||||||||||
seq2  CTGC-AAACAAGTAAGTGGCACTGCCCT--CCTCGCGTCGCGTGTGCAGT  47

seq1  GAGCCCAAAGCCCTGGACACAGGTGCAGGAGCTTGCTAGGACTTCACCCA  100
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  GAGCCCAAAGCCCTGGACACA-GTGCAGGAGC-TGCTAGGACTTCACCCA  95

seq1  GGCCCAGCTTTGCACCGAATTCAGTAGCACCTTTTCCCTCAGCACGCAGC  150
      |||||||| |||||||||| ||||||||| ||||||||||||||||||| 
seq2  GGCCCAGC-TTGCACCGAA-TCAGTAGCA-CTTTTCCCTCAGCACGCAG-  141

seq1  CTTTCCTCCACCGTTCCCCCACACGACCGGTTCGTCTGGTTCACCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCCACCGTTCCCCCACACGACCGGTTCGTCTGGTTCACCAATCT  191

seq1  TTCCCCGCTGAGCGGGACCGAGATTTCGGGGCTGTAACCCTTCGCCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGCTGAGCGGGACCGAGATTTCGGGGCTGTAACCCTTCGCCCCAC  241

seq1  CCTGCCCTTCCACTCGAGGCCCGCGGATCCCCGGCAGGGTTCTTCAGGTG  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTGCCCTTCCACTCGAGGCCCGCGGATCCCCGGCA-GGTTCTTCAGGTG  290

seq1  CGCGAGCCGCAGGCCCAGGAGGCGCTCGCGGCCCCCAGGCTGACCCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGAGCCGCAGGCCCAGGAGGCGCTCGCGGCCCCCAGGCTGACCCCCAG  340

seq1  CCCCGGACTTCCACGGGCCGCGGACCCAGCACGCGACACTCGGGAGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGACTTCCACGGGCCGCGGACCCAGCACGCGACACTCGGGAGTCCC  390

seq1  CAGAGTGGGCACCGGAAACCCACGGAGCACTTCCAGCGCCCGGGGCCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGGCACCGGAAACCCACGGAGCACTTCCAGCGCCCGGGGCCCGG  440

seq1  AGGGACGGGCCATGGAAGCCTGAGGGCCCTAAGTCTTCCCGCCCGGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACGGGCCATGGAAGCCTGAGGGCCCTAAGTCTTCCCGCCCGGGACC  490

seq1  GGCCCGCTTCCCGGGAGGCTGCAGGCTTGGGCTGGGACACACGGCTCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGCTTCCCGGGAGGCTGCAGGCTTGGGCTGGGACACACGGCTCCGG  540

seq1  AGCTGGGAAAAGTCACGCACTCACGTGCTATATCGCCGCAGAAGTCGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAAAAGTCACGCACTCACGTGCTATATCGCCGCAGAAGTCGAGT  590

seq1  GAGGGTGGAGAGCCAGCGAGGAGCACCGCAAGGCGGCAGGACCGCAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGGAGAGCCAGCGAGGAGCACCGCAAGGCGGCAGGACCGCAGGGG  640

seq1  CTTTACTGGAACCTGAGGGCTGGACCGCGGAGGGGCGGGGCTCGTGGGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTGGAACCTGAGGGCTGGACCGCGGAGGGGCGGGGCTCGTGGGCG  690

seq1  GAGTCCCGGAGCGGAGGGGCGAGGGCGGAGCTTGTGGGCGGGACCAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCGGAGCGGAGGGGCGAGGGCGGAGCTTGTGGGCGGGACCAAGGT  740

seq1  GAAGTTTTGCTTTTGATAGGGAGCTTGCTGCCCAACCCATTTCAACCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTTGCTTTTGATAGGGAGCTTGCTGCCCAACCCATTTCAACCCAT  790

seq1  TTTCACTCCCAGTTTTCTTTGCTGCGCCTCAACCCGCTGACCTTTTAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCCCAGTTTTCTTTGCTGCGCCTCAACCCGCTGACCTTTTAAAG  840

seq1  AATTC  855
      |||||
seq2  AATTC  845