BAC Information

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BAC

Clone NameB6Ng01-125F15
Chromosome3 (Build37)
Map Location 14,675,067 - 14,802,338
singlet/doubletdoublet
Overlap geneEG545507, Car1, LOC100041785
Upstream gene0710005M24Rik, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13
Downstream geneCar3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125F15.bB6Ng01-125F15.g
ACCDH928013DH928014
length1,123672
definitionDH928013|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F15, 5' end.DH928014|Mus musculus domesticus DNA, BAC clone: B6Ng01-125F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,801,212 - 14,802,338)(14,675,067 - 14,675,738)
sequence
gaattctttggattgcgctccatagaagttcattgctgacctgcgctcct
gagctatgaaacatgaatatgtgggctaaggagtagtttctttcaataaa
cagtaattatacggacagtaaaaataaatagggaagttggagaagagagc
atagcaagcaaggtgaaagcatatatgagcaaggatcaaggagggcaaaa
cttcattttctcagatctgccaaccaaccgtaattctgacctctgctttc
cctaaagcaatcacattcacaaagtaaacatacactataatggccatgca
attatcatgtacaatataatggaatgggaagagcgcaaagactagaactt
gaggccatgggagaagcaatattcttaggtctcaggaaatgtcattaagg
aacggcatcaaacctaacctaaaagcaaaccttttctaacctttctgtag
acacctaatgacctaaagagccttcctctgaagcttactccagggggatg
gcacttgtccacaaagaaggtctgatttggtttccaagcaagatggcctg
tggataggtgcatgatactgacagatctggagcctcgtgtttcaaacact
tagctttgggaccatactaacaatagagacctgtgtgccattgaggcttg
cttctggaaatctcagatagttctgacaaaagggataaaatgttttaaag
caatggttttgagtgtcgtccttaggccagcatcaccaactttactggaa
cactagatacaagtccatatttccagttttcacccccagacctattcacc
aagtccctaaaggttggggaagaggagcagtaacttttcccagcatgcca
ggtggttctaattcacactgatgtcccagagtgtgtggtaaagagtgtca
tacctcagagattacactgagcttccatcattctccagtcacctagcttg
aatgttttagttccttatgccattcggatcagtgagactaatcctttgtt
ttctccaaactcagatgtttaacaagcaaatacttttttttttttatctc
acaagagtatcatcatcatgttgaaagaataaaattaaattccctccatg
tattcatctgggttaggaaacaa
gaattcagttttgtgaaccctggcagtcactatttgacccatttcctcta
ttggtaaactggtggtcatctccatcaactcaatcgttccttccctaaaa
cacatctcaataaattcattgccctcattttggttttggagtaaaaactg
aattgttttcagtctcgacctgtgactgctccccttctccccttctaatc
ttcagtgcaacacatgtggcattggtgtgaaggaccgctatgcatgcaaa
cacagcaactctgttgaggtggaagctgagctaactaccttttttttctt
tctttccatgaagcatcatttctgacagcagctgtcaagttctggatatc
cagatttctgtaactggcaaatattttcttgtcaatgaacaaattaagat
tgcttatataaattaaacaacgaagtgttggtaagttgataaaatcagag
cttgctagagaaaatggaacttttagcaagcttgtttacacctctgtaag
tgtctaaattatttatgatactttccaaaatcaatgtaccctttagtagg
catttccttaactgaacacatgaacatatcttcccaaagctttcaagctg
gaaggtaattttgaattcagagagtttttcttaggtccactcttaatatg
tgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14801212_14802338
seq2: B6Ng01-125F15.b_48_1170 (reverse)

seq1  TTGTCTCCTAA-CCAGATGAATACATGGAGGAGAAATTTTATTTTATTCT  49
      |||| |||||| ||||||||||||||||||  | ||||| ||||||||||
seq2  TTGTTTCCTAACCCAGATGAATACATGGAG--GGAATTTAATTTTATTCT  48

seq1  TTCTACATGATGATGATACTCTTGTGAGATAAAAAAAAAAAAAGTATTTG  99
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCAACATGATGATGATACTCTTGTGAGAT-AAAAAAAAAAAAGTATTTG  97

seq1  CTTGGTTAAACATCTGAGGTTTGGAGAAAACAAAGGATTAGTCTCACTGA  149
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTT-GTTAAACATCTGA-GTTTGGAGAAAACAAAGGATTAGTCTCACTGA  145

seq1  TCCGAATGGCATAAGGAACTAAAACATTCAAGCTAGGTGACTGGAGAATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAATGGCATAAGGAACTAAAACATTCAAGCTAGGTGACTGGAGAATG  195

seq1  ATGGAAGCTCAGTGTAATCTCTGAGGTATGACACTCTTTACCACACACTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGCTCAGTGTAATCTCTGAGGTATGACACTCTTTACCACACACTC  245

seq1  TGGGACATCAGTGTGAATTAGAACCACCTGGCATGCTGGGAAAAGTTACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCAGTGTGAATTAGAACCACCTGGCATGCTGGGAAAAGTTACT  295

seq1  GCTCCTCTTCCCCAACCTTTAGGGACTTGGTGAATAGGTCTGGGGGTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCTTCCCCAACCTTTAGGGACTTGGTGAATAGGTCTGGGGGTGAA  345

seq1  AACTGGAAATATGGACTTGTATCTAGTGTTCCAGTAAAGTTGGTGATGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAATATGGACTTGTATCTAGTGTTCCAGTAAAGTTGGTGATGCT  395

seq1  GGCCTAAGGACGACACTCAAAACCATTGCTTTAAAACATTTTATCCCTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAGGACGACACTCAAAACCATTGCTTTAAAACATTTTATCCCTTT  445

seq1  TGTCAGAACTATCTGAGATTTCCAGAAGCAAGCCTCAATGGCACACAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAACTATCTGAGATTTCCAGAAGCAAGCCTCAATGGCACACAGGT  495

seq1  CTCTATTGTTAGTATGGTCCCAAAGCTAAGTGTTTGAAACACGAGGCTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTGTTAGTATGGTCCCAAAGCTAAGTGTTTGAAACACGAGGCTCC  545

seq1  AGATCTGTCAGTATCATGCACCTATCCACAGGCCATCTTGCTTGGAAACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTCAGTATCATGCACCTATCCACAGGCCATCTTGCTTGGAAACC  595

seq1  AAATCAGACCTTCTTTGTGGACAAGTGCCATCCCCCTGGAGTAAGCTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGACCTTCTTTGTGGACAAGTGCCATCCCCCTGGAGTAAGCTTCA  645

seq1  GAGGAAGGCTCTTTAGGTCATTAGGTGTCTACAGAAAGGTTAGAAAAGGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGCTCTTTAGGTCATTAGGTGTCTACAGAAAGGTTAGAAAAGGT  695

seq1  TTGCTTTTAGGTTAGGTTTGATGCCGTTCCTTAATGACATTTCCTGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTAGGTTAGGTTTGATGCCGTTCCTTAATGACATTTCCTGAGAC  745

seq1  CTAAGAATATTGCTTCTCCCATGGCCTCAAGTTCTAGTCTTTGCGCTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATATTGCTTCTCCCATGGCCTCAAGTTCTAGTCTTTGCGCTCTT  795

seq1  CCCATTCCATTATATTGTACATGATAATTGCATGGCCATTATAGTGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCCATTATATTGTACATGATAATTGCATGGCCATTATAGTGTATG  845

seq1  TTTACTTTGTGAATGTGATTGCTTTAGGGAAAGCAGAGGTCAGAATTACG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTGTGAATGTGATTGCTTTAGGGAAAGCAGAGGTCAGAATTACG  895

seq1  GTTGGTTGGCAGATCTGAGAAAATGAAGTTTTGCCCTCCTTGATCCTTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTGGCAGATCTGAGAAAATGAAGTTTTGCCCTCCTTGATCCTTGC  945

seq1  TCATATATGCTTTCACCTTGCTTGCTATGCTCTCTTCTCCAACTTCCCTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATGCTTTCACCTTGCTTGCTATGCTCTCTTCTCCAACTTCCCTA  995

seq1  TTTATTTTTACTGTCCGTATAATTACTGTTTATTGAAAGAAACTACTCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTACTGTCCGTATAATTACTGTTTATTGAAAGAAACTACTCCT  1045

seq1  TAGCCCACATATTCATGTTTCATAGCTCAGGAGCGCAGGTCAGCAATGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCACATATTCATGTTTCATAGCTCAGGAGCGCAGGTCAGCAATGAA  1095

seq1  CTTCTATGGAGCGCAATCCAAAGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  CTTCTATGGAGCGCAATCCAAAGAATTC  1123

seq1: chr3_14675067_14675738
seq2: B6Ng01-125F15.g_68_739

seq1  GAATTCAGTTTTGTGAACCCTGGCAGTCACTATTTGACCCATTTCCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTGTGAACCCTGGCAGTCACTATTTGACCCATTTCCTCTA  50

seq1  TTGGTAAACTGGTGGTCATCTCCATCAACTCAATCGTTCCTTCCCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAACTGGTGGTCATCTCCATCAACTCAATCGTTCCTTCCCTAAAA  100

seq1  CACATCTCAATAAATTCATTGCCCTCATTTTGGTTTTGGAGTAAAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTCAATAAATTCATTGCCCTCATTTTGGTTTTGGAGTAAAAACTG  150

seq1  AATTGTTTTCAGTCTCGACCTGTGACTGCTCCCCTTCTCCCCTTCTAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTTCAGTCTCGACCTGTGACTGCTCCCCTTCTCCCCTTCTAATC  200

seq1  TTCAGTGCAACACATGTGGCATTGGTGTGAAGGACCGCTATGCATGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCAACACATGTGGCATTGGTGTGAAGGACCGCTATGCATGCAAA  250

seq1  CACAGCAACTCTGTTGAGGTGGAAGCTGAGCTAACTACCTTTTTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAACTCTGTTGAGGTGGAAGCTGAGCTAACTACCTTTTTTTTCTT  300

seq1  TCTTTCCATGAAGCATCATTTCTGACAGCAGCTGTCAAGTTCTGGATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCATGAAGCATCATTTCTGACAGCAGCTGTCAAGTTCTGGATATC  350

seq1  CAGATTTCTGTAACTGGCAAATATTTTCTTGTCAATGAACAAATTAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTGTAACTGGCAAATATTTTCTTGTCAATGAACAAATTAAGAT  400

seq1  TGCTTATATAAATTAAACAACGAAGTGTTGGTAAGTTGATAAAATCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATATAAATTAAACAACGAAGTGTTGGTAAGTTGATAAAATCAGAG  450

seq1  CTTGCTAGAGAAAATGGAACTTTTAGCAAGCTTGTTTACACCTCTGTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGAGAAAATGGAACTTTTAGCAAGCTTGTTTACACCTCTGTAAG  500

seq1  TGTCTAAATTATTTATGATACTTTCCAAAATCAATGTACCCTTTAGTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAATTATTTATGATACTTTCCAAAATCAATGTACCCTTTAGTAGG  550

seq1  CATTTCCTTAACTGAACACATGAACATATCTTCCCAAAGCTTTCAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTAACTGAACACATGAACATATCTTCCCAAAGCTTTCAAGCTG  600

seq1  GAAGGTAATTTTGAATTCAGAGAGTTTTTCTTAGGTCCACTCTTAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAATTTTGAATTCAGAGAGTTTTTCTTAGGTCCACTCTTAATATG  650

seq1  TGTGTGTGTGTGTGTGTGTGTG  672
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTG  672