BAC Information

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BAC

Clone NameB6Ng01-126D03
Chromosome3 (Build37)
Map Location 55,472,034 - 55,472,621
singlet/doubletsinglet
Overlap genenone
Upstream geneD3Ertd300e, Exosc8, Alg5, Smad9, Rfxap, LOC545524, 6030405A18Rik, Ccna1, 4931419H13Rik, Spg20, A730037C10Rik, Sohlh2, Dclk1
Downstream geneMab21l1, 4933417G07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126D03.bB6Ng01-126D03.g
ACCDH928630DH928631
length1,084989
definitionDH928630|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D03, 5' end.DH928631|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaatgactcactgtaataaatatttgcatgtaagaccccaac
agctttacatgcaaataaagcatgtttgcaacaccacttcaataactcaa
tgtgtgatggagagatgggaaagatggtggagtgggtggtgcatgagcag
cagacagacagaactagagacaaggtggttttagaaaccatgtagatgtt
tgtggtctgtgctgccaccagaaaccatgtggaaaactatgatctgtgca
aggaatgggcaaggatgtgtcttttgcagtggtataaatgactgtaggct
cttaacagagaaagagagacatttaaagcttctatgacaacacccacccc
tcacacacatactcaccaccaataattccagacagaaagccattgcttct
gtgacaaaaaatgtgacaaagatgctgaaatgtagctcttcacagttaat
ggcttctggcaggagggatttgagtggagaaagactcagttatctttagc
aggatagccactgggaatttgaccatgctccagtgagtacaggggcaatg
caaattgtacttggtgtgttttctgggagtggtggagggcacaaggatga
gagggtagactttggaggaatgggaaaggagtgtgacctgcatgtgttgt
atgaaatccccaaataattaataaaaatatttttgtcagaaaaaaaaagt
gagagagggagagagagaagaaagggagggcatgcacagtaaggggaaca
aagaaagggaacacaaatgaacagaactggtctttttctacatagaggat
catatttttaataatggcaggtcttgaatatcaccacaaatacatatttt
cacacaaaattcacagcacacatttttgagaaatgacttctagttgctac
ataaaataataaaggattctggtctactgggagggaagtagctctagatg
aactaaaccttatttgtaggagtcagtcatccatgagtctgatgggcaat
gatacagaaagctacctcaacagcgaattccttccccaagcatgaactac
taatgagttgggtgggcttaatgcaaatggatgc
gaattctccactaaacacatctggtcctgggcttttttatgggaagacta
ttaatgactgcttctatttctttaggggttataagatgcttagatggttt
atctgatcctattttaactttggcacctggtatgtatctagaaaattgtc
catttcatccagattttccaatttagttgagtataaccttttgtagtatg
gtctgatgattttttgataacggattctgttgttatgtctctctttttac
ttctgattttattaatttggatactatttctttgccctctgcttagtctg
gctaagggttgattttcttaaagaaccagctcctgatattgttgattcac
tgtatagttctttttgtttctatttggttgatttcagccctgagtttgat
tatttcctgccatctattcctcttgggtatatttgcttcttcttcttttt
tctagagctttcaggtgttctgtcaactgtttctccagtttctttttgaa
cacacttagagctatgagtttttgtcttatcactgctttcattgtgtccc
ataagtatgatgtgtcttcattttcactaaattctaaaaagtcttttttt
tttctttatttctcccttgaccaagttatcactgagtagagtgttgttct
atgtgtaggtgcgttttccattgtttttgttggaatttaagaccagccat
agtcggtggtgatctgatagggtacattggattatttcaatatttttgta
tctgttgagacctgttttgtgaccaattatatagtcattttggaataggt
accatgaggtgctgagaataaggttatcttttgccttagggtgaaatgtt
taaaaatagatccatttgggtcatactctgttagttcatttggttcatac
ttctgtagttcattggtcttgttagttctgttcatgttctgtcattggga
gatgaatgtgagtctcactatatttggtggggtggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_55472034_55472621
seq2: B6Ng01-126D03.b_548_1129 (reverse)

seq1  GCATCCATTTTGCATTTGAGCCCA-CCAACTCATTTAGTAGTTCATGCCT  49
      ||||||| |||||| || |||||| |||||||| |||||||||||||| |
seq2  GCATCCA-TTTGCA-TTAAGCCCACCCAACTCA-TTAGTAGTTCATGCTT  47

seq1  GGGGGAGGAGTTCTGCTGTTGGAGGTAGCTTTCTGTATCTCTGCCCATCA  99
      |||| |||| ||| |||||| ||||||||||||||||||  |||||||||
seq2  GGGGAAGGAATTC-GCTGTT-GAGGTAGCTTTCTGTATCATTGCCCATCA  95

seq1  GACTCATAGGATGGCTGACTCCTCACATATAAGGTTTTAGTTCATCTAGA  149
      ||||||| ||||| ||||||||| ||| |||||| |||||||||||||||
seq2  GACTCAT-GGATGACTGACTCCT-ACAAATAAGG-TTTAGTTCATCTAGA  142

seq1  GTCTACTTTCCTTCACAGTAGACCAGAATCCATTATTATTTTATGTAGCA  199
      | |||| |||| || |||||||||||||||| ||||||||||||||||||
seq2  G-CTAC-TTCCCTCCCAGTAGACCAGAATCCTTTATTATTTTATGTAGCA  190

seq1  ACTAGAAGTCATTTCCTCAAAAATGTGTGCTGTGAGTTTTGTGTGAAAAT  249
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  ACTAGAAGTCATTT-CTCAAAAATGTGTGCTGTGAATTTTGTGTGAAAAT  239

seq1  ATGTATTTGTGGTGATATTC-AGACCTGCCATTATTAAATAATATGATCC  298
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  ATGTATTTGTGGTGATATTCAAGACCTGCCATTATTAAA-AATATGATCC  288

seq1  TCTATGTAGAAAAAGACCAGTTCTGTTCATTTGTGTTCCCTTTCTTTGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTAGAAAAAGACCAGTTCTGTTCATTTGTGTTCCCTTTCTTTGTT  338

seq1  -CCCTTACTGTGCATGCCCTCCCTTTCTTCTCTCTCT-CCTCTCTC-CTT  395
       |||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  CCCCTTACTGTGCATGCCCTCCCTTTCTTCTCTCTCTCCCTCTCTCACTT  388

seq1  TTTTTTTCTGAC-AAAATATTTTTATTAATTATTTGGGGATTTCATACAA  444
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTGACAAAAATATTTTTATTAATTATTTGGGGATTTCATACAA  438

seq1  CACATGCAGGTCACACTCCTTTCCCATTCCTCCAAAGTCTACCCTCTCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCAGGTCACACTCCTTTCCCATTCCTCCAAAGTCTACCCTCTCAT  488

seq1  CCTTGTGCCCTCCACCACTCCCAGAAAACACACCAAGTACAATTTGCATT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGCCCTCCACCACTCCCAGAAAACACACCAAGTACAATTTGCATT  538

seq1  GCCCCTGTACTCACTGGAGCATGGTCAAATTCCCAGTGGCTATC  588
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTACTCACTGGAGCATGGTCAAATTCCCAGTGGCTATC  582