BAC Information

Click to search

BAC

Clone NameB6Ng01-126M07
Chromosome3 (Build37)
Map Location 41,058,387 - 41,059,007
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126M07.bB6Ng01-126M07.g
ACCDH929052DH929053
length1,0581,205
definitionDH929052|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M07, 5' end.DH929053|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttggaattttgatgaggattgcattgaatctgtagattgctt
tcggcaagattgctgtttttactatattgatcctgccaatccatgagcat
gagagatcttcccatcttctgagatcttctttgatttcgttcttcaaaaa
cttgaagtttttctcatacagatctttcacttccttagttagagtcacac
caaggtatttttttttttattacttgtgactattgtgaagggtgttgttt
ccctaatttctttcacagcttgtttatcctttgtgtagagaaaggccact
gatttgcttgagttaattttatatcctgctacttcactgaagctgtttat
caggcttaggagttctctggtggaatttttttggggtcacttaagtttac
tatcatatcatctgcaaatagtgatattttgacttctttctttccaattt
gtatcccctggacctccttttgttgtcaaattgctctggctaggcatcga
gtactatattgaatatgtagggagaaagtgggcagctttgtctagttcct
gattttagtgggattgcttccagcttctctccatttactttgatgttggc
tactggtttgctgtatattgcttttattatcttttctactcagacatcac
ccccaaaacaaagtatgctgtctcttacactctgagcttcctgacaatgt
ttgttgaactttcctgcctcttcgtttttaaaaattttttttattggatt
attttctctatttacatttcagatgttatcgccttccccagttcccccct
ccagaaacctcttaccccatcctccctctccctgcttctatgagggtgtt
cctttactcacctacacactattacctccccaccctcaattcccctacac
tgggtcatctattgagcttcataggaccaaggacctctcctcccatctgc
tacacatgcagctggagccatgtgtactccttgttaatggcttagtctct
gggagctcggggtgggggtctcgttggtatattgttgctctttctatgga
tgcaaacc
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaaccaggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggtttgggatcttcct
gagaagcaagcaataaagcttttgccgtggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataagtggcaccgacgaacccggg
aactgtcatcacaccggcgcaaggaagatccctcgtttgcggggcagaat
cagaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaattt
cttcagagttagaagcccttttgattgtttgcacggcgattatgaggact
gtcagcaaatggtagaagcggggcagaaagttctggacgaaattcaagaa
agtctatcagaggtagagcggggagagaaagtaaaagtagagaggaaaca
aagtgcactgaagaatttaggcctttccacgggccttgagcccgaggaaa
agagaatgtcagggaaaaatacctggggagagattagaaaaagggatgga
aagggagagaagaagggagatcaagctggagaggcacataaggaaaggag
cctctacccgccactggatgaatttaagcagctagctcttagtagctcag
aaccagatgaaggagttagcacctctgaagaaatggactcggaggaggaa
gcagttcgttataagggagaaaggtaccagcaagataaaatgtaagctac
tcagtccagaaaaaggcaaaagccgccggactgtcggcttcagggtccta
gtgcacctcgcttatgtgcagaggtagtgtcaatttttacctactctcat
gtaggggtaaaccctcgtggcgtaagccacaggtctgccaatggatgtca
ctcatattcctcctttgggagagtcaatattacagtttctatgacacctg
ctctgtgtattgtttgccacacctttacaggtgaaaagcctctcatgttt
cagcactgctgagccttgagtgcttggggcagccaatctaaccggccatg
ggcagccataatcctcactaatttacaattgtctcaagagatgaccactg
acgcttctaatccatggaacggcccgcactaaatcttaacaaaaggtagg
ttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058387_41059007
seq2: B6Ng01-126M07.b_47_673 (reverse)

seq1  ATAAAAGCAATCTACAGCAAACCAGTAGCCAACATTAAAGTAAATGGTGA  50
      ||||||||||| ||||||||||||||||||||||| ||||||||||| ||
seq2  ATAAAAGCAATATACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGA  50

seq1  GAAGCTGGAAGCAATCCCACTAAAATCAGAAACTAGACAAGGCTGCCCAC  100
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  GAAGCTGGAAGCAATCCCACTAAAATCAGGAACTAGACAAAGCTGCCCAC  100

seq1  TTTCTCCCTACCTCTTCAACATAGTACTTGAAGTTCTAGCCAGAGCAATT  150
      ||||||||||| | ||||| |||||||| || |  |||||||||||||||
seq2  TTTCTCCCTACATATTCAATATAGTACTCGATG-CCTAGCCAGAGCAATT  149

seq1  TGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTGAA  200
      ||||||||||||||| || |||||||||||||||||||| ||||||| ||
seq2  TGACAACAAAAGGAGGTCCAGGGGATACAAATTGGAAAGAAAGAAGTCAA  199

seq1  AATATCACTTTTTACAGATGATATGATAGTATATATAAGTGACCC--TAA  248
      ||||||||| ||| ||||||||||||||||| |  ||||||||||   ||
seq2  AATATCACTATTTGCAGATGATATGATAGTAAACTTAAGTGACCCCAAAA  249

seq1  AAATTCCACCAGAGAACTCCTAAGCCTGATAAACAGCTTCGGTGAAGTAG  298
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATTCCACCAGAGAACTCCTAAGCCTGATAAACAGCTTCAGTGAAGTAG  299

seq1  CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAG  348
      | ||||||||||||||||||| ||| ||| ||||||||||||||||||||
seq2  CAGGATATAAAATTAACTCAAGCAAATCAGTGGCCTTTCTCTACACAAAG  349

seq1  AATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGT  398
       ||||||| |||| |||||||||||||||||||||||||||| |||||||
seq2  GATAAACAAGCTGTGAAAGAAATTAGGGAAACAACACCCTTCACAATAGT  399

seq1  CACAAATAAT-----ATAAAATATCTTGGCATGACTCTAACTAAGGAAGT  443
      ||||| ||||     | |||||| |||||  |||||||||||||||||||
seq2  CACAAGTAATAAAAAAAAAAATACCTTGGTGTGACTCTAACTAAGGAAGT  449

seq1  GAAAGATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAG  493
      ||||||||||||||| || |||||||||| | ||||||| ||||| ||||
seq2  GAAAGATCTGTATGAGAAAAACTTCAAGTTTTTGAAGAACGAAATCAAAG  499

seq1  AAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATC  543
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  AAGATCTCAGAAGATGGGAAGATCTCTCATGCTCATGGATTGGCAGGATC  549

seq1  AACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGC  593
      || || |||||||  || |||||||| |||||||||||||||||||||||
seq2  AATATAGTAAAAACAGCAATCTTGCCGAAAGCAATCTACAGATTCAATGC  599

seq1  AATCCCCATCAAAATTCCAACTCAATTC  621
      ||||| |||||||||||||||| |||||
seq2  AATCCTCATCAAAATTCCAACTGAATTC  627