BAC Information

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BAC

Clone NameB6Ng01-127F12
Chromosome3 (Build37)
Map Location 47,800,572 - 47,801,349
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545517, LOC383849, LOC383850, LOC100039426
Downstream geneLOC666202, LOC666208, 1700018B24Rik, LOC100039404
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127F12.bB6Ng01-127F12.g
ACCDH929485DH929486
length1,117780
definitionDH929485|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F12, 5' end.DH929486|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttctttagttctttatatatgttggatatttgtccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtgatct
ttttgtcttattgacggtgtcttttgccttgcagaagctttggcatttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
gtattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccaattagatttaaccttagtacaaggagataggaatggatcgattcgc
attcttctacatgataacagccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagcttccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcagtataccagtaccatgcattttttatcgcaattac
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccatatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattatatctgtagattgctttggcaagatagccatttt
tacaatgttgatcctgccagtccatgagcatgggagatctttccatcttc
tgaggatctttttaattttctttcttcagagacttgaattttttatcata
cagatctttcacttccttagttagagtcacgccacgaatattttatatta
tttgtgactattggagaagggtgttgtttccctattccttctcagcttgt
tattcttgtgtagagaaaggcattgacttctttagttaattttattccag
tactccctgaagctgttatcaggttcagagttccctgggtggaatttaag
ggtcacctactatacct
gaattcaatcctgtgcttatttttatgtcttcattgtttttatcatggat
tccttgaaatgctttatgtcttctcagctttcacattccctcatacacca
ttttgttatacataagaaattactttgtacacatcaaaacaaaaatattt
ttctattcttttatttctatcacattattatgattacttctgttgtatat
ttgctttgtagattctgtgttatgggtgcatgaaggcctgtgagtttctt
ttccacttaatttgttttcaaaatcatagggaatatatgttttaaactaa
tagctcaaaactgatgttcatgcttaacagatgtgtcttactataagttt
gataaattaattttcttgtcactatacttgctacattttcgtggagaata
actcatgatgattatggaataacttcagaggatttctaatggatattaga
aaagcaataaacaaagtgatattttgagttgttttgattattggaatatg
ttatgttgaattacatgttgatatgacatacatattgattgtggctgaaa
ttatacaaagttgtatggcttttgaattgaaaatttataaaaattaaaaa
tgaatctataactctttaaatattttcacaattaagtcacagctataaaa
atctatgtgtcatagaaattcaagaaatgaatgtgattcattcattatgt
acacacacatacacacatacatacatatgtgtggaatgtatgtatgtgtg
tgtacaagttgacgtcaacaatgtaaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_47800572_47801349
seq2: B6Ng01-127F12.g_69_848 (reverse)

seq1  TAGTTTACATTGTAG-CGTTAACTTGTACACACACATACATACA-TACAC  48
      ||||||||||||| | ||| |||||||||||||||||||||||| | |||
seq2  TAGTTTACATTGTTGACGTCAACTTGTACACACACATACATACATTCCAC  50

seq1  ACATATGTATGTATGTGTGTATGTGTGTGTACATAATGAATGAATCACAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTATGTATGTGTGTATGTGTGTGTACATAATGAATGAATCACAT  100

seq1  TCATTTCTTGAATTTCTATGACACATAGATTTTTATAGCTGTGACTTAAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTGAATTTCTATGACACATAGATTTTTATAGCTGTGACTTAAT  150

seq1  TGTGAAAATATTTAAAGAGTTATAGATTCATTTTTAATTTTTATAAATTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATATTTAAAGAGTTATAGATTCATTTTTAATTTTTATAAATTT  200

seq1  TCAATTCAAAAGCCATACAACTTTGTATAATTTCAGCCACAATCAATATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCAAAAGCCATACAACTTTGTATAATTTCAGCCACAATCAATATG  250

seq1  TATGTCATATCAACATGTAATTCAACATAACATATTCCAATAATCAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATATCAACATGTAATTCAACATAACATATTCCAATAATCAAAAC  300

seq1  AACTCAAAATATCACTTTGTTTATTGCTTTTCTAATATCCATTAGAAATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAATATCACTTTGTTTATTGCTTTTCTAATATCCATTAGAAATC  350

seq1  CTCTGAAGTTATTCCATAATCATCATGAGTTATTCTCCACGAAAATGTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGTTATTCCATAATCATCATGAGTTATTCTCCACGAAAATGTAG  400

seq1  CAAGTATAGTGACAAGAAAATTAATTTATCAAACTTATAGTAAGACACAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATAGTGACAAGAAAATTAATTTATCAAACTTATAGTAAGACACAT  450

seq1  CTGTTAAGCATGAACATCAGTTTTGAGCTATTAGTTTAAAACATATATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAGCATGAACATCAGTTTTGAGCTATTAGTTTAAAACATATATTC  500

seq1  CCTATGATTTTGAAAACAAATTAAGTGGAAAAGAAACTCACAGGCCTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGATTTTGAAAACAAATTAAGTGGAAAAGAAACTCACAGGCCTTCA  550

seq1  TGCACCCATAACACAGAATCTACAAAGCAAATATACAACAGAAGTAATCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCATAACACAGAATCTACAAAGCAAATATACAACAGAAGTAATCA  600

seq1  TAATAATGTGATAGAAATAAAAGAATAGAAAAATATTTTTGTTTTGATGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGTGATAGAAATAAAAGAATAGAAAAATATTTTTGTTTTGATGT  650

seq1  GTACAAAGTAATTTCTTATGTATAACAAAATGGTGTATGAGGGAATGTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGTAATTTCTTATGTATAACAAAATGGTGTATGAGGGAATGTGA  700

seq1  AAGCTGAGAAGACATAAAGCATTTCAAGGAATCCATGATAAAAACAATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGAAGACATAAAGCATTTCAAGGAATCCATGATAAAAACAATGA  750

seq1  AGACATAAAAATAAGCACAGGATTGAATTC  778
      ||||||||||||||||||||||||||||||
seq2  AGACATAAAAATAAGCACAGGATTGAATTC  780