BAC Information

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BAC

Clone NameB6Ng01-127F17
Chromosome3 (Build37)
Map Location 72,677,901 - 72,678,699
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041459
Downstream gene2010204N08Rik, Slitrk3, Bche
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127F17.bB6Ng01-127F17.g
ACCDH929494DH929495
length800528
definitionDH929494|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F17, 5' end.DH929495|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaattgtaagagaatatttcatagcttaaaaatatagataaa
tagaaataatttcataaaatatatgaaaactctcatcacttcctttctgg
agaactagaataatacaatgctcttaataaatacttgagataaatgaaaa
ttgttgtagcaattggatccccaagatccaagaggagatattcaatttgg
gctttctccatctagagacaaggaacaacagacaaattaagaatactgag
attcagagaagtgataataatctttcccaggaaggagccacttaaatgga
tatatactactaaataaacaaactcaaaatcatatatagtatatatatat
atatataaatatatgtgtgtgtgtgtgtgtgggaacattgcacaaagagt
gaacattgcatttatttatttaagaataatttgatctattgatattgatt
tggatgatttcaggactgaaagctttgtcacagaggctgtctcctgtgtc
tctatatgtgctgcacctttggtgatctaaatgttgatttggcgaataaa
atgcatatatgaaaatttggtatttgaatcctaggtgtagatcctgaagt
tcatttactgttgaagataaaagataaacagtattagagatactaactct
cagtaactcactcctctaattctgataattttgtgatatatctggtattt
agatcattgaaatataaaatattttttctctctgtgtagaaagatgagag
agagagaaagaaaaagagagagagagatagagatcaaagaattgagtatt


cttcctgattacctcatgtcctgactagcttttagtcgatttgacacatt
atacttctatgcagaagagaagagaatatgtctaattctctagataattg
atgtcccagaagaggatgtttactgggaggagacatttcctaattgtggg
tttctgtttaaattcttatctcctgcaggaggaagcttttctgatgatgg
ctgagagggacaattatctaaggttatagcacaataccagtaaaagtttg
tttttgtttttgtttttgtttttgtttgtttgtttgtttgttttttcttt
ttttcttttgccatacttgtttggaaaaaaaatcctatccagttataagt
ccttaacttcctaagcaggggtatgccagacatatgcttcatccaaagaa
gtaagccttaaatccaacaagagaatggtccaggagagcacaggggtcca
cctggcccgagaggcttctgcctcgcttctgcctcaggctctggtgggag
ctacttttggctccgggactccgcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72677901_72678699
seq2: B6Ng01-127F17.b_49_848

seq1  GAATTCAAAAATTGTAAGAGAATATTTCATAGCTTAAAAATATAGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATTGTAAGAGAATATTTCATAGCTTAAAAATATAGATAAA  50

seq1  TAGAAATAATTTCATAAAATATATGAAAACTCTCATCACTTCCTTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAATTTCATAAAATATATGAAAACTCTCATCACTTCCTTTCTGG  100

seq1  AGAACTAGAATAATACAATGCTCTTAATAAATACTTGAGATAAATGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAGAATAATACAATGCTCTTAATAAATACTTGAGATAAATGAAAA  150

seq1  TTGTTGTAGCAATTGGATCCCCAAGATCCAAGAGGAGATATTCAATTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTAGCAATTGGATCCCCAAGATCCAAGAGGAGATATTCAATTTGG  200

seq1  GCTTTCTCCATCTAGAGACAAGGAACAACAGACAAATTAAGAATACTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTCCATCTAGAGACAAGGAACAACAGACAAATTAAGAATACTGAG  250

seq1  ATTCAGAGAAGTGATAATAATCTTTCCCAGGAAGGAGCCACTTAAATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGAAGTGATAATAATCTTTCCCAGGAAGGAGCCACTTAAATGGA  300

seq1  TATATACTACTAAATAAACAAACTCAAAATCATATATAGTATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTACTAAATAAACAAACTCAAAATCATATATAGTATATATATAT  350

seq1  ATATATAAATATATGTGTGTGTGTGTGTGTGGGAACATTGCACAAAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAATATATGTGTGTGTGTGTGTGTGGGAACATTGCACAAAGAGT  400

seq1  GAACATTGCATTTATTTATTTAAGAATAATTTGATCTATTGATATTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTGCATTTATTTATTTAAGAATAATTTGATCTATTGATATTGATT  450

seq1  TGGATGATTTCAGGACTGAAAGCTTTGTCACAGAGGCTGTCTCCTGTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATTTCAGGACTGAAAGCTTTGTCACAGAGGCTGTCTCCTGTGTC  500

seq1  TCTATATGTGCTGCACCTTTGGTGATCTAAATGTTGATTTGGCGAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGTGCTGCACCTTTGGTGATCTAAATGTTGATTTGGCGAATAAA  550

seq1  ATGCATATATGAAAATTTGGTATTTGAATCCTAGGTGTAGATCCTGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATATGAAAATTTGGTATTTGAATCCTAGGTGTAGATCCTGAAGT  600

seq1  TCATTTACTGTTGAAGATAAAAGATAAACAGTATTAGAGATACTAACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACTGTTGAAGATAAAAGATAAACAGTATTAGAGATACTAACTCT  650

seq1  CAGTAACTCACTCCTCTAATTCTGATAATTTTGTGATATATCTGGTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACTCACTCCTCTAATTCTGATAATTTTGTGATATATCTGGTATTT  700

seq1  AGATCATTGAAATATAAAATA-TTTTTCTCTCTGTGTAGAAAGAGGAGAG  749
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  AGATCATTGAAATATAAAATATTTTTTCTCTCTGTGTAGAAAGATGAGAG  750

seq1  AGAGAGAAAGAAAAAGAGAGAGAGAGAGAGAGATCAAAGAATTGAGTATT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAGAGAAAGAAAAAGAGAGAGAGAGATAGAGATCAAAGAATTGAGTATT  800


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