BAC Information

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BAC

Clone NameB6Ng01-127G14
Chromosome3 (Build37)
Map Location 131,684,735 - 131,777,474
singlet/doubletdoublet
Overlap geneDkk2
Upstream geneLef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1, Olfr375-ps1
Downstream geneLOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127G14.bB6Ng01-127G14.g
ACCDH929536DH929537
length823570
definitionDH929536|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G14, 5' end.DH929537|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,776,652 - 131,777,474)(131,684,735 - 131,685,310)
sequence
gaattcagcacctcctaaaacaatacttttttctctagagcagtaggtcc
atgccagtcagagaaattctcaagaggaggctagagccttatttcaaaac
aacttgtactcaaaagctagaactgagatgacattgataacttaaaatca
acatcattcttgatttccgcaatcagcaacagcatttaagaaagcatcaa
aaataaaaattctagcaggtaaccaaagcctcaaagggtggataatgagt
taaaaggtaaatgttagaaatcagaatgaaagagccaggaaattatagtt
tgaatgagaattatactaaaatggattttcctcagacaaatagcctttcc
tgcatcgttaatggtaattgtagtttcatagagggttttggtaatagggg
cagtgtgattcagaaggaagaatttcaacatctcaaagaaagttcaaaac
agttggttttcctgagtgtttgactaaggtctgcagaggaagccctccct
ggcctctggtcctctttgtgtgctttgatatccatgaaagtttatttgtc
tgtgtcaaatttctaggagctttttgaaatctttagtgactcccagatca
tgttaattgcattcactggtcaagttcaaattccatgagtcacacagagg
ctgaactgagtgcagatgggttctaggacacaaccacagaccttaagtgt
aacaagtagaaaggcccaagtggggatgtttcaattccacctagaagggg
gaaggaaataaatatgggagcagaggggagggagggacctgggtgggaga
aacaagggggaggggaaagggga
agggactacaattaagaatttgcttcaaattctctattctgaatcttcaa
aataaaacatggacaattgcaagggaaaaaattctcaactgttagtgtat
ttttattaagtcttagattttgtgtgtgtgtgtgtgttctcatttatcat
catcccagcaacagaggcttattcagcatttctgaggtaaagatggatgt
cgaaagctctgactagcgcctgttattaattaaagtaacccacccaacag
caaataatacaagataattctccagcatactcagaaacaatgaagaacaa
tcacaggctataaatggaaaaagtggcattgatgataaggctagggcttt
taaacactcatgagagtccatttatagcatctgccactaccttctgcctc
tcggcataactctgtcatgatggatgaaaacaggcatcacttcctcctca
gtcattccactgggtttaatcataagcaccacgccttttgtgtagacgcc
ccccccccacttccttccctccgatgtccagtcttccaagctcagtaaag
tcacccagcaatcctatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_131776652_131777474
seq2: B6Ng01-127G14.b_48_870 (reverse)

seq1  TCCCCTTTCCCCTCCCCCTTGTTTCTCCCACCCAGGTCCCTCCCTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCCCTCCCCCTTGTTTCTCCCACCCAGGTCCCTCCCTCCCCT  50

seq1  CTGCTCCCATATTTATTTCCTTCCCCCTTCTAGGTGGAATTGAAACATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCATATTTATTTCCTTCCCCCTTCTAGGTGGAATTGAAACATCC  100

seq1  CCACTTGGGCCTTTCTACTTGTTACACTTAAGGTCTGTGGTTGTGTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGGGCCTTTCTACTTGTTACACTTAAGGTCTGTGGTTGTGTCCTA  150

seq1  GAACCCATCTGCACTCAGTTCAGCCTCTGTGTGACTCATGGAATTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCATCTGCACTCAGTTCAGCCTCTGTGTGACTCATGGAATTTGAAC  200

seq1  TTGACCAGTGAATGCAATTAACATGATCTGGGAGTCACTAAAGATTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGTGAATGCAATTAACATGATCTGGGAGTCACTAAAGATTTCAA  250

seq1  AAAGCTCCTAGAAATTTGACACAGACAAATAAACTTTCATGGATATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCTAGAAATTTGACACAGACAAATAAACTTTCATGGATATCAAA  300

seq1  GCACACAAAGAGGACCAGAGGCCAGGGAGGGCTTCCTCTGCAGACCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAAAGAGGACCAGAGGCCAGGGAGGGCTTCCTCTGCAGACCTTAG  350

seq1  TCAAACACTCAGGAAAACCAACTGTTTTGAACTTTCTTTGAGATGTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACTCAGGAAAACCAACTGTTTTGAACTTTCTTTGAGATGTTGAA  400

seq1  ATTCTTCCTTCTGAATCACACTGCCCCTATTACCAAAACCCTCTATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCCTTCTGAATCACACTGCCCCTATTACCAAAACCCTCTATGAAA  450

seq1  CTACAATTACCATTAACGATGCAGGAAAGGCTATTTGTCTGAGGAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATTACCATTAACGATGCAGGAAAGGCTATTTGTCTGAGGAAAATC  500

seq1  CATTTTAGTATAATTCTCATTCAAACTATAATTTCCTGGCTCTTTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGTATAATTCTCATTCAAACTATAATTTCCTGGCTCTTTCATTC  550

seq1  TGATTTCTAACATTTACCTTTTAACTCATTATCCACCCTTTGAGGCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTAACATTTACCTTTTAACTCATTATCCACCCTTTGAGGCTTTG  600

seq1  GTTACCTGCTAGAATTTTTATTTTTGATGCTTTCTTAAATGCTGTTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTGCTAGAATTTTTATTTTTGATGCTTTCTTAAATGCTGTTGCTG  650

seq1  ATTGCGGAAATCAAGAATGATGTTGATTTTAAGTTATCAATGTCATCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGGAAATCAAGAATGATGTTGATTTTAAGTTATCAATGTCATCTCA  700

seq1  GTTCTAGCTTTTGAGTACAAGTTGTTTTGAAATAAGGCTCTAGCCTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGCTTTTGAGTACAAGTTGTTTTGAAATAAGGCTCTAGCCTCCTC  750

seq1  TTGAGAATTTCTCTGACTGGCATGGACCTACTGCTCTAGAGAAAAAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATTTCTCTGACTGGCATGGACCTACTGCTCTAGAGAAAAAAGTA  800

seq1  TTGTTTTAGGAGGTGCTGAATTC  823
      |||||||||||||||||||||||
seq2  TTGTTTTAGGAGGTGCTGAATTC  823

seq1: chr3_131684735_131685310
seq2: B6Ng01-127G14.g_66_641

seq1  GAATTCAGGGACTACAATTAAGAATTTGCTTCAAATTCTCTATTCTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGACTACAATTAAGAATTTGCTTCAAATTCTCTATTCTGAAT  50

seq1  CTTCAAAATAAAACATGGACAATTGCAAGGGAAAAAATTCTCAACTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAATAAAACATGGACAATTGCAAGGGAAAAAATTCTCAACTGTTA  100

seq1  GTGTATTTTTATTAAGTCTTAGATTTTGTGTGTGTGTGTGTGTTCTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTTTATTAAGTCTTAGATTTTGTGTGTGTGTGTGTGTTCTCATT  150

seq1  TATCATCATCCCAGCAACAGAGGCTTATTCAGCATTTCTGAGGTAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCATCCCAGCAACAGAGGCTTATTCAGCATTTCTGAGGTAAAGAT  200

seq1  GGATGTCGAAAGCTCTGACTAGCGCCTGTTATTAATTAAAGTAACCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCGAAAGCTCTGACTAGCGCCTGTTATTAATTAAAGTAACCCACC  250

seq1  CAACAGCAAATAATACAAGATAATTCTCCAGCATACTCAGAAACAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAAATAATACAAGATAATTCTCCAGCATACTCAGAAACAATGAA  300

seq1  GAACAATCACAGGCTATAAATGGAAAAAGTGGCATTGATGATAAGGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATCACAGGCTATAAATGGAAAAAGTGGCATTGATGATAAGGCTAG  350

seq1  GGCTTTTAAACACTCATGAGAGTCCATTTATAGCATCTGCCACTACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTAAACACTCATGAGAGTCCATTTATAGCATCTGCCACTACCTTC  400

seq1  TGCCTCTCGGCATAACTCTGTCATGATGGATGAAAACAGGCATCACTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCGGCATAACTCTGTCATGATGGATGAAAACAGGCATCACTTCC  450

seq1  TCCTCAGTCATTCCACTGGGTTTAATCATAAGCACCACGCCTTTTGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTCATTCCACTGGGTTTAATCATAAGCACCACGCCTTTTGTGTA  500

seq1  GACGCCCCCCCCCCACTTCCTTCCCTCCGATGTCCAGTCTTCCAAGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCCCCCCCCCCACTTCCTTCCCTCCGATGTCCAGTCTTCCAAGCTCA  550

seq1  GTAAAGTCACCCAGCAATCCTATGCA  576
      ||||||||||||||||||||||||||
seq2  GTAAAGTCACCCAGCAATCCTATGCA  576