BAC Information

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BAC

Clone NameB6Ng01-129B18
Chromosome3 (Build37)18 (Build37)
Map Location 154,423,366 - 154,423,97244,800,044 - 44,800,093
singlet/doubletsingletsinglet
Overlap geneBC007180
Upstream geneAsb17, Msh4, Rabggtb, Acadm, Slc44a5, LOC100040980, Lhx8, LOC100040810, LOC100040829, Tyw3, Cryz
Downstream geneTnni3k, Fpgt, Lrrc44, EG383956, Scp2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129B18.bB6Ng01-129B18.g
ACCDH930783DH930784
length978115
definitionDH930783|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B18, 5' end.DH930784|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(154,423,366 - 154,423,972)(44,800,044 - 44,800,093)
sequence
gaattcagtcacaagacttggcacaggaaatgtctttacccactgaggca
tctctccagcccagttattctaatatttttcatttacaaaccaaagttag
gactggggagatagctcaatcagtaaggcatgctgtgtccaggtgctgta
gtccacacctgtaaattagcgctagggatcaggaggtaggtggggtcctg
gggattgctggcccctcccactatgttacgtgaaggttacttacaggttc
agcaagagatcctgtctcaaaacaaaccaaacacaacaacaaatgaaaca
ggatgaacaatgctttagaaatgacaaccacatgacctctgacccacata
cacacttggacattcacccacacatgcaggtacacgcacacaccaacata
gacatcgtggtggtttggatgagaatgaatccccaaaggtcatgtgtttg
aacattagtcatgtggtttgaatacttgttggaactgcttgggaaggatt
agaaggtgtggtgttttggcttggaatttcctccctatgcccccttctcc
attcttcaatagtaatatatattctgtaccattgtgtattgcaagcattg
agttaggtttttttttttctttattttacaggggtttagaattaaagtat
tgccttgaaaatcagaagacacatagacttggatacatatgcaatgttga
cactgtaaaagcctacagggattcttgaagtaggactaagttagttttgt
gctatgatgtggctacaggcctatggggacaaggaattggaaatttggta
ggatgaatgagtgtcccccataggctcatatatttgaatacttggtttag
aatgattagagtgtggctttgttggagaagtgtgccataagggtaagctt
taagggttcaatagaccagcaatcccaccgttctcttgtgcctctccatg
cacatcacgttagcactgggtgcctgtg
tttcttagagaactttttgtctaaaagtataaaaagtctgacagcaataa
aggaaggtggtgcagcacacacattttccggtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_154423366_154423972
seq2: B6Ng01-129B18.b_48_654 (reverse)

seq1  CCTAACTCAATGCTTGCAATACACAATGGTACAGAATATATATTACTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTCAATGCTTGCAATACACAATGGTACAGAATATATATTACTATT  50

seq1  GAAGAATGGAGAAGGGGGCATAGGGAGGAAATTCCAAGCCAAAACACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGGAGAAGGGGGCATAGGGAGGAAATTCCAAGCCAAAACACCAC  100

seq1  ACCTTCTAATCCTTCCCAAGCAGTTCCAACAAGTATTCAAACCACATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTAATCCTTCCCAAGCAGTTCCAACAAGTATTCAAACCACATGAC  150

seq1  TAATGTTCAAACACATGACCTTTGGGGATTCATTCTCATCCAAACCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAAACACATGACCTTTGGGGATTCATTCTCATCCAAACCACCA  200

seq1  CGATGTCTATGTTGGTGTGTGCGTGTACCTGCATGTGTGGGTGAATGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTCTATGTTGGTGTGTGCGTGTACCTGCATGTGTGGGTGAATGTCC  250

seq1  AAGTGTGTATGTGGGTCAGAGGTCATGTGGTTGTCATTTCTAAAGCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTATGTGGGTCAGAGGTCATGTGGTTGTCATTTCTAAAGCATTG  300

seq1  TTCATCCTGTTTCATTTGTTGTTGTGTTTGGTTTGTTTTGAGACAGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTGTTTCATTTGTTGTTGTGTTTGGTTTGTTTTGAGACAGGATC  350

seq1  TCTTGCTGAACCTGTAAGTAACCTTCACGTAACATAGTGGGAGGGGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGAACCTGTAAGTAACCTTCACGTAACATAGTGGGAGGGGCCAG  400

seq1  CAATCCCCAGGACCCCACCTACCTCCTGATCCCTAGCGCTAATTTACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCCAGGACCCCACCTACCTCCTGATCCCTAGCGCTAATTTACAGG  450

seq1  TGTGGACTACAGCACCTGGACACAGCATGCCTTACTGATTGAGCTATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACTACAGCACCTGGACACAGCATGCCTTACTGATTGAGCTATCTC  500

seq1  CCCAGTCCTAACTTTGGTTTGTAAATGAAAAATATTAGAATAACTGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCTAACTTTGGTTTGTAAATGAAAAATATTAGAATAACTGGGCT  550

seq1  GGAGAGATGCCTCAGTGGGTAAAGACATTTCCTGTGCCAAGTCTTGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGCCTCAGTGGGTAAAGACATTTCCTGTGCCAAGTCTTGTGAC  600

seq1  TGAATTC  607
      |||||||
seq2  TGAATTC  607

seq1: chr18_44800044_44800093
seq2: B6Ng01-129B18.g_126_187 (reverse)

seq1  CACACACACACACACACACACACACACACACACACC------------AC  38
      ||||||||||||||||||||||||||||||||||||              
seq2  CACACACACACACACACACACACACACACACACACCGGAAAATGTGTGTG  50

seq1  CACCACCACCTT  50
      |  |||||||||
seq2  CTGCACCACCTT  62