BAC Information

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BAC

Clone NameB6Ng01-129G14
Chromosome3 (Build37)
Map Location 10,169,795 - 10,303,742
singlet/doubletdoublet
Overlap genePmp2, Fabp9, Fabp4, 1700008G05Rik
Upstream geneZbtb10, Zfp704, Pag1, LOC621504, Fabp5, LOC100041480
Downstream geneImpa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564, LOC383826, EG667978
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129G14.bB6Ng01-129G14.g
ACCDH931000DH931001
length1,04085
definitionDH931000|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G14, 5' end.DH931001|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,169,795 - 10,170,836)(10,303,658 - 10,303,742)
sequence
gaattcacgttgtagtttatcatgcagcccacttgattgaacagtgtcta
gcatgtgacaattaccgtgtggaagttatgtggtttttttcattgtatcc
aatgggagcaagagtggggtgggaggggctacatggcatcctatgggttt
gaactgttctctgcactttctgaagtaagttctgcaaacaacaatggctc
taataatttacagtttgatgaggttgtcttctctgctttctccagagagc
cagccccttttcagacagacttacatttctggctcatggctgttaattct
cacctttccttcattaatgcccagagccttgctgatcactgaaaacaaag
tgcttcagtttatgtcttctctgtccgtgagatgacctgactaaaactca
ttcatcttatctatgcattaattactgaaaaaaaaactaattacaagaca
tcaagaataatagcataataacaccaaatgccagggtattcacatcactc
caaattccaagtcttaaaattccaacaacattttatcttttttttcttta
tttttttattagatattttctttatttacatttcaaatgctatcccgaaa
gttcctataccctccccccgccctgctctcctacccacccactcccactt
cttggcccaggtgttcccctgtactggggcatataaagtttgcaagaccc
aggggcctctcttcccaatgatgacctactaggccatcttctgctacata
tgcagctagagacatgagctctggatgtactggttagttcatatttgttg
ttccacctggagggttggagaccccttcagctcctcgggtaatttctcaa
gcttctccattggagtcctttcagcaaagtcttgctggcatatgcaatag
tggctgggtttggtggctgattatgggatggatcccagggtgagtagtat
ctgaatgtccattcctttcatctagctccaaactttgtctcttgtaactc
atcaatgctattttggtccctattctagggaggaatgaag
cagtaaatggacccaaatgagctcaggacagttccagacagtgtctggat
ctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10169795_10170836
seq2: B6Ng01-129G14.b_45_1084

seq1  GAATTCACGTTGTAGTTTATCATGCAGCCCACTTGATTGAACAGTGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTTGTAGTTTATCATGCAGCCCACTTGATTGAACAGTGTCTA  50

seq1  GCATGTGACAATTACCGTGTGGAAGTTATGTGGTTTTTTTCATTGTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGACAATTACCGTGTGGAAGTTATGTGGTTTTTTTCATTGTATCC  100

seq1  AATGGGAGCAAGAGTGGGGTGGGAGGGGCTACATGGCATCCTATGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGCAAGAGTGGGGTGGGAGGGGCTACATGGCATCCTATGGGTTT  150

seq1  GAACTGTTCTCTGCACTTTCTGAAGTAAGTTCTGCAAACAACAATGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTTCTCTGCACTTTCTGAAGTAAGTTCTGCAAACAACAATGGCTC  200

seq1  TAATAATTTACAGTTTGATGAGGTTGTCTTCTCTGCTTTCTCCAGAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTACAGTTTGATGAGGTTGTCTTCTCTGCTTTCTCCAGAGAGC  250

seq1  CAGCCCCTTTTCAGACAGACTTACATTTCTGGCTCATGGCTGTTAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTTTTCAGACAGACTTACATTTCTGGCTCATGGCTGTTAATTCT  300

seq1  CACCTTTCCTTCATTAATGCCCAGAGCCTTGCTGATCACTGAAAACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTCCTTCATTAATGCCCAGAGCCTTGCTGATCACTGAAAACAAAG  350

seq1  TGCTTCAGTTTATGTCTTCTCTGTCCGTGAGATGACCTGACTAAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGTTTATGTCTTCTCTGTCCGTGAGATGACCTGACTAAAACTCA  400

seq1  TTCATCTTATCTATGCATTAATTACTGAAAAAAAAACTAATTACAAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTATCTATGCATTAATTACTGAAAAAAAAACTAATTACAAGACA  450

seq1  TCAAGAATAATAGCATAATAACACCAAATGCCAGGGTATTCACATCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATAATAGCATAATAACACCAAATGCCAGGGTATTCACATCACTC  500

seq1  CAAATTCCAAGTCTTAAAATTCCAACAACATTTTATCTTTTTTTTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCAAGTCTTAAAATTCCAACAACATTTTATCTTTTTTTTCTTTA  550

seq1  TTTTTTTATTAGATATTTTCTTTATTTACATTTCAAATGCTATCCCGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTAGATATTTTCTTTATTTACATTTCAAATGCTATCCCGAAA  600

seq1  GTTCCTATACCCTCCCCCCGCCCTGCTCTCCTACCCACCCACTCCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTATACCCTCCCCCCGCCCTGCTCTCCTACCCACCCACTCCCACTT  650

seq1  CTTGGCCCAGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCAGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCC  700

seq1  AGGGGCCTCTCTTCCCAATGATGACCTACTAGGCCATCTTCTGCTACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCTCTCTTCCCAATGATGACCTACTAGGCCATCTTCTGCTACATA  750

seq1  TGCAGCTAGAGACATGAGCTCTGGATGTACTGGTTAGTTCATA-TTGTTG  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCAGCTAGAGACATGAGCTCTGGATGTACTGGTTAGTTCATATTTGTTG  800

seq1  TTCCACCTGGAGGGTTGGAGACCCCTTCAGCTCCTCGGGTAATTTCTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTGGAGGGTTGGAGACCCCTTCAGCTCCTCGGGTAATTTCTCAA  850

seq1  GCTTCTCCATTGGAGTCCTTTCAGCAAAGTCTTGCTGGCATATGCAATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCCATTGGAGTCCTTTCAGCAAAGTCTTGCTGGCATATGCAATAG  900

seq1  TGGCTGGGTTTGGTGGCTGATTATGGGATGGATCCCAGGGTGGAGTAGTA  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGCTGGGTTTGGTGGCTGATTATGGGATGGATCCCAGGGT-GAGTAGTA  949

seq1  TCTGAATGGTCCA-TCCTTTCATCTTAGCTCCAAACTTTGTCTC-TGTAA  997
      ||||||| ||||| |||||||||| ||||||||||||||||||| |||||
seq2  TCTGAAT-GTCCATTCCTTTCATC-TAGCTCCAAACTTTGTCTCTTGTAA  997

seq1  CTCATTCCATGCCTATTTTGTTCCCTATTCTAGGGAGGAATGAAG  1042
      |||| || ||| |||||||| ||||||||||||||||||||||||
seq2  CTCA-TCAATG-CTATTTTGGTCCCTATTCTAGGGAGGAATGAAG  1040

seq1: chr3_10303658_10303742
seq2: B6Ng01-129G14.g_75_159 (reverse)

seq1  ACACACACACACACACACACACACACACACACCAGATCCAGACACTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACCAGATCCAGACACTGTCT  50

seq1  GGAACTGTCCTGAGCTCATTTGGGTCCATTTACTG  85
      |||||||||||||||||||||||||||||||||||
seq2  GGAACTGTCCTGAGCTCATTTGGGTCCATTTACTG  85