BAC Information

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BAC

Clone NameB6Ng01-129H15
Chromosome3 (Build37)
Map Location 133,791,105 - 133,792,271
singlet/doubletsinglet
Overlap genenone
Upstream gene9130221D24Rik, Ppa2, E130014J05Rik, EG620205, LOC100039168
Downstream geneLOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234, Tacr3, LOC229837, LOC100039290
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129H15.bB6Ng01-129H15.g
ACCDH931048DH931049
length1,1501,144
definitionDH931048|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H15, 5' end.DH931049|Mus musculus domesticus DNA, BAC clone: B6Ng01-129H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacgttccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagatgcagttacagcgccaattagg
tggtaacagcttggaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaaaggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcctagaagttttggctccagagaggggagtgcttcta
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaagaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggagaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacacagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggagaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaggccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccattgtaaatttactaatgcgtttgcgat
tgtacgagggatagttatatcatgttaggcgtattttacaaccttgttat
tgtttcatgtgaacatgagatattatttgtgtcaagttgacaggggtggg
attgtagtggcttattcctggttgtcaactgacatatttggaatgaacta
caatccgaattggaaggctcacatgacccttatctggagcttggagatct
tattctgatcttgtttgagaatcttgagcatggggctatggattcagaga
ttgatctcgagcttaggatcatccttatcgggctacgctttctcggggga

gaattctttcaaactaaaaagagattccatgaaaggagggggtgacaaga
ggggtgcctgccctagaatgtctagggcctggggatccttcatggctgca
tcctcataggcagtaaggccaggaggggaactcctgcaggtggccagggt
ctttgttacactctatggagattcctcttccgcagttatcattcagaaac
agcaggaatgagagctgaatagaaaaagtcaaagggggaaaagtggaaac
ctgtatggtaacatgtaaaaactgacacttgatggtgaggcttcctttcc
acatcccccaaaccttatagtacaatacccaggtgtgatattgccgggtt
gaatgcatatgaatgtatggctatgccatagtgaagcttcacaattacca
tcaaattggattgaatattccaacagaccagcaggagtaagatttttaaa
ttttttaaatattttaaaattttctttaaaatgcagtattttattaaagt
atatctgggtcatgctactataaaaattaaaaagcccaacatcaaaagtg
gctgaagtaaatgacatattaacataatttgatgtgtagctattatcact
catattgtgaagccatgaatatcaaaactaacacatttaaaaccccaggt
atttgccagactttcttagaaggaaagtcactgattaactccaacttttc
ctaacttttttctatcatcaattctccactaatacatatataataatgaa
tatcaagtaaggaaagcaataagaaaaggtgaaatacccaaagacctaga
gaacacccatctaggtatgacttgatttagaactattaattggtagcttt
aaaagctgaatcaaggagatattattttgtgcttacatgtgcagttcttc
atggacatatatctcacagacagactttatcatttagttacttgaaaata
tcttcccacatgtttaacgattttaaaattattgacaaatttctttttca
gaaaaaggaagcactcatagccagtctgtatcctatgactagattttttt
ttcattcttagctaaactttcaaggaaaggcagattaaatggaagatgat
ttcaactagattgaaactaccttagactactatccctttcttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_133791105_133792271
seq2: B6Ng01-129H15.g_69_1212 (reverse)

seq1  ACAAGAAAAGAGATAGGTAGTCTAAGATTAGTATTCATACTAGTTTGAAA  50
      ||||| |||| |||| ||||||||||  |||| ||||  |||| ||||||
seq2  ACAAG-AAAGGGATA-GTAGTCTAAG-GTAGT-TTCAATCTAG-TTGAAA  45

seq1  ATTCATCTTCTATTTTAATCTTGCTTTTTCCTTTTGAAAGTTTTAGCTAA  100
        |||||||| | ||||||||  |  |||||  ||||||| |||||||||
seq2  --TCATCTTCCA-TTTAATCTGCC--TTTCC--TTGAAAG-TTTAGCTAA  87

seq1  GAATGAAAAAAAAATTCTAGGTCATAGGATTAACAGACTGGCTATGAGTG  150
      |||||||||||||| |||| ||||||||||  ||||||||||||||||||
seq2  GAATGAAAAAAAAA-TCTA-GTCATAGGAT--ACAGACTGGCTATGAGTG  133

seq1  CTTCCCTGTTTTCTGAAAAAGAAATTTGTCAATTATTTTTAAAATCGTTA  200
      |||||   |||||||||||||||||||||||| || ||||||||||||| 
seq2  CTTCC--TTTTTCTGAAAAAGAAATTTGTCAA-TAATTTTAAAATCGTT-  179

seq1  AAACATGTGGGAAGATAATTTTCAAGTAACTGAATGATAAAGTCTGTCTG  250
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  AAACATGTGGGAAGAT-ATTTTCAAGTAACTAAATGATAAAGTCTGTCTG  228

seq1  TGAGATATATGTCCATGAAGAACTGCACATGTAAGCACAAAATAATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGAGATATATGTCCATGAAGAACTGCACATGTAAGCACAAAATAATA-TC  277

seq1  TCCTTGATTCAGCTTTT-AAGCTACCAATTAATAGTTCCTAAATCAAGTC  349
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  TCCTTGATTCAGCTTTTAAAGCTACCAATTAATAGTT-CTAAATCAAGTC  326

seq1  ATACCTAGATGGGTGTTCTCTAGGTCTTTGGGTATTTCACCTTTTCTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTAGATGGGTGTTCTCTAGGTCTTTGGGTATTTCACCTTTTCTTAT  376

seq1  TGCTTTCCTTACTTGATATTCATTATTATATATGTATTAGTGGAGAATTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCTTACTTGATATTCATTATTATATATGTATTAGTGGAGAATTG  426

seq1  ATGATAGAAAAAAGTTAGGAAAAGTTGGAGTTAATCAGTGACTTTCCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGAAAAAAGTTAGGAAAAGTTGGAGTTAATCAGTGACTTTCCTTC  476

seq1  TAAGAAAGTCTGGCAAATACCTGGGGTTTTAAATGTGTTAGTTTTGATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGTCTGGCAAATACCTGGGGTTTTAAATGTGTTAGTTTTGATAT  526

seq1  TCATGGCTTCACAATATGAGTGATAATAGCTACACATCAAATTATGTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTTCACAATATGAGTGATAATAGCTACACATCAAATTATGTTAA  576

seq1  TATGTCATTTACTTCAGCCACTTTTGATGTTGGGCTTTTTAATTTTTATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATTTACTTCAGCCACTTTTGATGTTGGGCTTTTTAATTTTTATA  626

seq1  GTAGCATGACCCAGATATACTTTAATAAAATACTGCATTTTAAAGAAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATGACCCAGATATACTTTAATAAAATACTGCATTTTAAAGAAAAT  676

seq1  TTTAAAATATTTAAAAAATTTAAAAATCTTACTCCTGCTGGTCTGTTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATTTAAAAAATTTAAAAATCTTACTCCTGCTGGTCTGTTGGA  726

seq1  ATATTCAATCCAATTTGATGGTAATTGTGAAGCTTCACTATGGCATAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAATCCAATTTGATGGTAATTGTGAAGCTTCACTATGGCATAGCC  776

seq1  ATACATTCATATGCATTCAACCCGGCAATATCACACCTGGGTATTGTACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCATATGCATTCAACCCGGCAATATCACACCTGGGTATTGTACT  826

seq1  ATAAGGTTTGGGGGATGTGGAAAGGAAGCCTCACCATCAAGTGTCAGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTTGGGGGATGTGGAAAGGAAGCCTCACCATCAAGTGTCAGTTT  876

seq1  TTACATGTTACCATACAGGTTTCCACTTTTCCCCCTTTGACTTTTTCTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTTACCATACAGGTTTCCACTTTTCCCCCTTTGACTTTTTCTAT  926

seq1  TCAGCTCTCATTCCTGCTGTTTCTGAATGATAACTGCGGAAGAGGAATCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTCATTCCTGCTGTTTCTGAATGATAACTGCGGAAGAGGAATCT  976

seq1  CCATAGAGTGTAACAAAGACCCTGGCCACCTGCAGGAGTTCCCCTCCTGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAGTGTAACAAAGACCCTGGCCACCTGCAGGAGTTCCCCTCCTGG  1026

seq1  CCTTACTGCCTATGAGGATGCAGCCATGAAGGATCCCCAGGCCCTAGACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTGCCTATGAGGATGCAGCCATGAAGGATCCCCAGGCCCTAGACA  1076

seq1  TTCTAGGGCAGGCACCCCTCTTGTCACCCCCTCCTTTCATGGAATCTCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGCAGGCACCCCTCTTGTCACCCCCTCCTTTCATGGAATCTCTT  1126

seq1  TTTAGTTTGAAAGAATTC  1167
      ||||||||||||||||||
seq2  TTTAGTTTGAAAGAATTC  1144