BAC Information

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BAC

Clone NameB6Ng01-129I20
Chromosome3 (Build37)
Map Location 75,403,750 - 75,404,301
singlet/doubletsinglet
Overlap geneSerpini1
Upstream geneLOC100041551, EG667459, BC050789, Serpini2, Wdr49, Pdcd10
Downstream geneGolph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129I20.bB6Ng01-129I20.g
ACCDH931104DH931105
length1,0761,186
definitionDH931104|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I20, 5' end.DH931105|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttttggcatgcatacactcatgggtgtggaaatatctacct
acaagggccacactgccctcccctgcaaaagctatcacatttcaatagct
catctagggactgggggctcatgagctcctcctaactctatgctgaatgt
tgactggcttgaccatgggcagtcacagaagctgagagctcatgagttca
acacctttgttatgtccacaagaaacattttccctgtttctctccaacct
ctgtctcttatcatctttctgcccattttttcttgatgttctctgaattg
tggggcatgagtatgtatagcttccctattggtaagttaacactaccgac
aattattctagcatagagatttttattcaatactgttaatattttctcta
ccgccagatatatgagctacatatgcttatccaattatgtagtcactagg
aacttgtaggttttgtgcaatgtggttagtgtagctaaaaattatatttt
aatgttgtttaaacttaaggaacttaaatagcctatgtttttagtggcta
taccatggagctagcagtatgaaaatgtttcataacattggttcttaatc
aaacagaccagaaaagaaatatttaaaggaacagagagctggccgtggta
acaggcgcctttaatcccagcactcaggaggcagaggtaggcggatttct
gagttcgaggccagcctagtctacaaagtgagttccaggacagccaggtc
tatacagagaaaccatgtctcgaacccccccaccaaaaaaaaaaaaaaaa
aagaaacagagaaaaaatactattgagaactatacaacacatgcttctat
gcctaacacactttgatttaaaacaaagtctatttcttcagggatatcaa
taatagagttccattttaaattctgaagtgctttccttacagctgttgag
tcttggggaaaagcaaatagtacctacacaatttcagtaaggaaactccc
accattctggatgtgatgggctttcatataataacaaaattttcttttta
gctcagcttgggaaaaacatattcat
gaattctgcactaaacccatctggtcctgggcttttttgtttgtttgttt
gtttgtttgggagactattattgactgcttctatttctttaggagatata
ggactgtttagatcattaacctgagcctgatttaactttggtactttgag
tatagccttttgtagaaggatctgatggtgttttggacttcttcaggatc
tgctgttatgtctccattttcatttctgaatttgttcattaggatgctgt
ccctgtgccctctagtgagtctggcaaagggtttatctattttgttgatt
ttctcaaagaaccagctcctggtttggttgattctttgaatagttcttgt
ttccacttggttgattttgcccctgggtttgattagttcctgccatctac
tcctcttggtgaattttgcttacttttgttctagagctttttggtgtgct
gtcaagctgctagtatgtgctctctctagtttctttttggaggcactcag
agctatgagttttcctcttagaaatgctttcattgtatcccatacatttg
ggtatgttgtggcttcattttcattaaactctaaaaagtccttaatttct
ttctttattccttccttgaccaagatatcattgagaagagtgttgttcag
tttccacatgaatgttggctttctattatttacgttgttattgaagatca
gccttagtccatggtgatctgataggatgcatggaacaatttcaatattt
ttgtatctgttgaggcctgttttgtgacccattatatggtcaattttgga
gaaggtcccgtgaggtgctgagaagaaggtataaccttttgttttagata
aaatgttctgtagatatctgttagatccatttctttcataacttctgtta
gtttcactgtgtccttgtttagtttctgtttccatgatctgtccattgat
gaaagtggtatgttgaagtctcccactattatgtggtgagtgcaatgtgt
gccttgagctttactaaagtgtcttttaatggatggtggctgcccttggt
atttggaacataataattcagaattgagagattcctctggaaaaatttac
ctctggaagaaatagaaaggggccctccttgactttttggttggcctggg
ggtgaagtgaatctcttagagtatgataggctcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75403750_75404301
seq2: B6Ng01-129I20.b_584_1124 (reverse)

seq1  ATGAATATGGTTTTTCCCAAGCTGAGCTAAAAAGAATATTTTGTTATTAT  50
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  ATGAATAT-GTTTTTCCCAAGCTGAGCTAAAAAGAAAATTTTGTTATTAT  49

seq1  ATGGAAAGCCCAATCACATTCCAGAATGGTTGGGGAGTTTCCCCTTACCT  100
      || |||||||| |||||| |||||||||||  ||||||||  ||||| ||
seq2  AT-GAAAGCCC-ATCACA-TCCAGAATGGT--GGGAGTTT--CCTTA-CT  91

seq1  GAAATTGTGTAGGTACTTATTTGCTTTTTCCCAAGACTCACCAGCTGTAA  150
      |||||||||||||||| ||||||||||| ||||||||||| |||||||||
seq2  GAAATTGTGTAGGTAC-TATTTGCTTTTCCCCAAGACTCAACAGCTGTAA  140

seq1  GGAAAGCACTTCAGAATTTAAAATGGAACTCTATTATTTGATATCCCTGA  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGAAAGCACTTCAGAATTTAAAATGGAACTCTATTA-TTGATATCCCTGA  189

seq1  AGAAATAGACTTTGTTTTAAATCAAAGTGTGTTAGGCATAGAAGCATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGACTTTGTTTTAAATCAAAGTGTGTTAGGCATAGAAGCATGTG  239

seq1  TTGTATAGTTCTCAATAGTATTTTTTCTCTGTTTCTTTTTTTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGTTCTCAATAGTATTTTTTCTCTGTTTCTTTTTTTTTTTTTTT  289

seq1  TTTGGTGGGGGGGTTCGAGACATGGTTTCTCTGTATAGACCTGGCTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGGGGGGTTCGAGACATGGTTTCTCTGTATAGACCTGGCTGTCC  339

seq1  TGGAACTCACTTTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCACTTTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTA  389

seq1  CCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGCCTGTTACCACGGCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGCCTGTTACCACGGCCAGC  439

seq1  TCTCTGTTCCTTTAAATATTTCTTTTCTGGTCTGTTTGATTAAGAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTCCTTTAAATATTTCTTTTCTGGTCTGTTTGATTAAGAACCAA  489

seq1  TGTTATGAAACATTTTCATACTGCTAGCTCCATGGTATAGCCACTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGAAACATTTTCATACTGCTAGCTCCATGGTATAGCCACTAAAAA  539

seq1  CA  552
      ||
seq2  CA  541