BAC Information

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BAC

Clone NameB6Ng01-129O14
Chromosome3 (Build37)
Map Location 147,415,206 - 147,415,396
singlet/doubletsinglet
Overlap genenone
Upstream genePrkacb, LOC100040540, Ttll7, Ppia-ps3_1528.1
Downstream geneLOC100040354
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129O14.bB6Ng01-129O14.g
ACCDH931374DH931375
length1,223580
definitionDH931374|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O14, 5' end.DH931375|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctatctttgtaaagaattgagttggaattttgatggggattg
cattgaaactctggattactgtgtgtgtaggattgccattttcattttac
taatctggtctaaccgtgagcatgggagatatttccatcttctgtgaact
tcttcaatttctgtctccagaaactttaagttcttgtcaaactgactttt
cacttgattggttagagttatctcaagaaattttatttgtgaccattttg
aagagttttgtttccctacttttcttctaagcccatttatacttattgta
aggaaggctgatgatttttttgagataatcttctattgagctacctttgc
tgaagttgtttattagctgttgttttctctagtagaatatttgggatcat
ttttatatactatcatatcctgggcaaataatgatatcttgaatttccag
tttgtatccttttgacattattttattgcttaattgctctagttaaaatt
tcaagtattttacagaataaatagggtgagagtgcaccgtcttgcattgt
ctctgatgttcgtgttgttaaatcaaatttttctacatttaattcaattt
tggctataaactattctaaaatgaaaatactttgttgttgttgttgtagt
ttttgttgttttttcgagacagggtttctgtgtaaagccctggctgtcct
ggaactcactttgcagaccaggctggcctcgaactcagaaatctgtctgc
ctctgcctcccaagtgctggcattaaaggcgtgcgccaccatgtctggct
ttcgccacttttttgctctacatctcttttattatatttaattatgagcc
ttgaattcttcctcatttgaagcctttttaaacgaagaagtgtattattg
ctaaggctttttcagcatctaatgaaatgatgacgtgtgttttatccatg
aatttccttatatagtggattaccttgatggatttcttgaaccgaaacat
ctctaaatcactgggataaagcctaattgctcataatgatggtcgttgac
atgtcttggatcagttgtaagaattaaaggagattttacataggctatca
taaagaaaaagttctcatttctccattcttggtagggtccttctgtggct
taggattgagggtactgggcctaaagatgaatacctacgatcttatagcc
cgtcttattttttgtaagtaaag
gaattctgcactaaagccatatgacgctgggccagactctgtttttgttt
gtttgtttgtttgtttttggttttttgtttgttttttcgttttgtttttt
tatgttttttttggttgggaggtttttattgaatttatttaggcgatttg
ggcctgtttagatagtttatctgctcttgatttaagtttaatatgtggca
tctgtcttgaaaatcatcagtctcatctacattttaaagttatgttgagt
ataggctttgaaattgatactgatgatttatttatttttttactttcttc
agttcctgttgttatttctttcttttcatttctgatttttttttttaatt
tggatactatctctgggtccattagtttctttatctagtggtacatctat
cttattgatattttcaatgaaccagcatttggttccttgatttttctcta
ttgtatacttatttttttttcatttggttgatttttgccatgagtttgac
tatttcctgctttctaccccacttgggtgtgttttttgttttttggtttt
gtttgtttgtttgtttttttctagagatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_147415206_147415396
seq2: B6Ng01-129O14.g_120_635 (reverse)

seq1  AAAACAAACAAACAAACAAAAAACCAAAAAACAAAAA----AGGGCAGTG  46
      |||||||||||||||||  ||||||||||||||||||    |    ||||
seq2  AAAACAAACAAACAAAC--AAAACCAAAAAACAAAAAACACACCCAAGTG  48

seq1  GTG----ACGC---ACACCTTTAA--TCCTAGCACTTAGGAAGCAGAGGA  87
      | |    | ||   | |   | ||  || | |||   |  || || | ||
seq2  GGGTAGAAAGCAGGAAATAGTCAAACTCATGGCAAAAATCAACCAAATGA  98

seq1  ---------AGGTGGATCTCCGTG----TTCAAG--ACC--AGTCTGGTC  120
               | ||  |     | |     |||||  |||  |  ||||| 
seq2  AAAAAAAATAAGTATACAATAGAGAAAAATCAAGGAACCAAATGCTGGTT  148

seq1  TATAG------------AGTGAGTTCTAGCCAGGCTACACAGAGAAA---  155
       || |            ||  || | || |||  ||| | | |||||   
seq2  CATTGAAAATATCAATAAGATAGATGTA-CCA--CTAGATAAAGAAACTA  195

seq1  ---GAC----------TGTC-------AAAAAACAAAACAAAAA--CAAA  183
         |||          | ||       |||||| ||| || |||   |||
seq2  ATGGACCCAGAGATAGTATCCAAATTAAAAAAAAAAATCAGAAATGAAAA  245

seq1  CAAACAAA------------------------------------------  191
       ||| |||                                          
seq2  GAAAGAAATAACAACAGGAACTGAAGAAAGTAAAAAAATAAATAAATCAT  295

seq1  --------------------------------------------------  191
                                                        
seq2  CAGTATCAATTTCAAAGCCTATACTCAACATAACTTTAAAATGTAGATGA  345

seq1  --------------------------------------------------  191
                                                        
seq2  GACTGATGATTTTCAAGACAGATGCCACATATTAAACTTAAATCAAGAGC  395

seq1  --------------------------------------------------  191
                                                        
seq2  AGATAAACTATCTAAACAGGCCCAAATCGCCTAAATAAATTCAATAAAAA  445

seq1  --------------------------------------------------  191
                                                        
seq2  CCTCCCAACCAAAAAAAACATAAAAAAACAAAACGAAAAAACAAACAAAA  495

seq1  ---------------------  191
                           
seq2  AACCAAAAACAAACAAACAAA  516