BAC Information

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BAC

Clone NameB6Ng01-130G03
Chromosome3 (Build37)
Map Location 76,787,189 - 76,788,303
singlet/doubletsinglet
Overlap geneLOC100041635
Upstream geneFstl5, LOC100041625
Downstream geneDnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130G03.bB6Ng01-130G03.g
ACCDH931711DH931712
length1,103848
definitionDH931711|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G03, 5' end.DH931712|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaggtagtttaaggttctggctgtctctcaaggaaaacaatc
atctctgttccacatgggtcatgcattcttatgttctacatcctttgcaa
aaggaacaggtttgaaaataaatgataaaatatgtaccttccgaatacaa
agaggtttattaagttgttcgttattattagatagtataatgttcagcaa
catgtccattactttaaggactaaaaccaaaatatgtaattggcaaacat
gcttaaatttgacaatttatcatatacaatgtattcaatgaagcaaaatt
gtgcttactgcaaaattctgcttatgtctggcaaacttatgtataatgaa
gtcacacagcatattttcattttttacttttagtaatactatttactact
atattactaattatatattaataatattaatgtattaatacaatacttgt
gttgttgaaactgatcaagtgctcacattaagttaaactatgtgaatggt
tccccaaactgagtaacaagttcacttagtaattttccttggcaaatgta
gagcataggtcatactcaagaagtgttctaaaaaatattacagaaagtgt
gcaaaagaaataaagtagtgacagagaagcagaatgcacacttcaacagt
gtgtgccttcctgtagcctcatttccatttctaatccccagtgatgtttg
aataacatttgattacttgactataagtcaatgtctgatgtaacttggat
cattgaatgcattcatttattcactcaagttacttttgatttgttagaaa
agaaattttgtatctatttacttggtaagcatcataagattcttcataaa
aagttactaaagagataatagatactacccatgaggtaacataaactcag
ggttttattaagaagtaaaccacagtttgctttttaggtcaccttacata
tgaataaggtgatgggtaatggaggtaaacccagataaaaatataacata
attgtatctataaccaatatatacgaagaaataaggatatttaaactatt
tatgatgttttcaggatcaaggcatcctattaatgataaactgataaact
gga

gaattctctgtttaactctgtattccattttttatttgtgttatttggtt
tgttgatatctaatttctttagttctttatatattatagatattaatcct
ctgttgattttagagttggtaaggatatttgcccattctggaggctgcca
ttttgccctattgattacagaaacttttcagtctcatgagattgcattta
ctaaatgttgatcttagtacctgatttattggagttctgttaaagaattt
atcttctttaccaatgagttcaagcttgtaccccactttcttttctacta
gattgagtgtgtttgattttatgtagatgtccttgatttacttggacttg
agttttgtccatggtgattgatacttatctatttgtattcatctaggtag
gttggtgaccccatccctccactgggggctctgtctatctactggaggta
gtttcttcacgctccatcttcttactgttgggcactttggataatatcat
ccccactgaatcccgagagcctctcatatccaaggtcttttaagtgctaa
gttgggttagggttagggttagggttaggctttagcttaggcttaggctt
aggcttaggcttaggtttaggcttaggtttaggcttaggcttaggcttag
gcttagcttaggcttaggcttaggcttaggtttaggcttaggattcagac
atcgagttagaccagcatcatttgttgaagatgtttattactctccattg
tatgatttggttcttgtcaaaaatcaagtgtcataggctgtgaattattt
taagtcttgatctatccatgatcatctggctgttatgtcccaatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76787189_76788303
seq2: B6Ng01-130G03.b_50_1152 (reverse)

seq1  TCCAGATTTATCAAGTTTATCATTAATAGGGATGCCCTGGATCCCTGAAA  50
      ||||| |||||| ||||||||||||||| ||||| ||| ||| |||||||
seq2  TCCAG-TTTATC-AGTTTATCATTAATA-GGATG-CCTTGAT-CCTGAAA  45

seq1  ACATCATAAAATAGTTTTAAATATCCTATATTTCTCTGTATATAATTGGT  100
      ||||||| |||||| |||||||||||| |||||||  |||||| ||||||
seq2  ACATCAT-AAATAG-TTTAAATATCCT-TATTTCTTCGTATAT-ATTGGT  91

seq1  TATAGATTACATTATGTTATATTTTTATCTGGGTTTACCTCCATTACCCA  150
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATACAATTATGTTATATTTTTATCTGGGTTTACCTCCATTACCCA  141

seq1  TTACCCTTATTCATATGGTAAGGTGACCTAAAAAGCAAACTGTGGTTTAC  200
      | | |||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCA-CCTTATTCATAT-GTAAGGTGACCTAAAAAGCAAACTGTGGTTTAC  189

seq1  TTCTTAAATAAAACCCTGAGTTTATGTTACCTCATGGGTAGTATCTATTA  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTT-AATAAAACCCTGAGTTTATGTTACCTCATGGGTAGTATCTATTA  238

seq1  TCTCTTTAGTAACTTTTTATGAAGAATCTTATGATGCTTACCAAGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAGTAACTTTTTATGAAGAATCTTATGATGCTTACCAAGTAAAT  288

seq1  AGATACAAAATTTCTTTTCTAACAAATCAAAAGTAACTTGAGTGAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAAAATTTCTTTTCTAACAAATCAAAAGTAACTTGAGTGAATAAA  338

seq1  TGAATGCATTCAATGATCCAAGTTACATCAGACATTGACTTATAGTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATTCAATGATCCAAGTTACATCAGACATTGACTTATAGTCAAG  388

seq1  TAATCAAATGTTATTCAAACATCACTGGGGATTAGAAATGGAAATGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAATGTTATTCAAACATCACTGGGGATTAGAAATGGAAATGAGGC  438

seq1  TACAGGAAGGCACACACTGTTGAAGTGTGCATTCTGCTTCTCTGTCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAGGCACACACTGTTGAAGTGTGCATTCTGCTTCTCTGTCACTA  488

seq1  CTTTATTTCTTTTGCACACTTTCTGTAATATTTTTTAGAACACTTCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCTTTTGCACACTTTCTGTAATATTTTTTAGAACACTTCTTGA  538

seq1  GTATGACCTATGCTCTACATTTGCCAAGGAAAATTACTAAGTGAACTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACCTATGCTCTACATTTGCCAAGGAAAATTACTAAGTGAACTTGT  588

seq1  TACTCAGTTTGGGGAACCATTCACATAGTTTAACTTAATGTGAGCACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTTGGGGAACCATTCACATAGTTTAACTTAATGTGAGCACTTG  638

seq1  ATCAGTTTCAACAACACAAGTATTGTATTAATACATTAATATTATTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTCAACAACACAAGTATTGTATTAATACATTAATATTATTAATA  688

seq1  TATAATTAGTAATATAGTAGTAAATAGTATTACTAAAAGTAAAAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAGTAATATAGTAGTAAATAGTATTACTAAAAGTAAAAAATGAA  738

seq1  AATATGCTGTGTGACTTCATTATACATAAGTTTGCCAGACATAAGCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTGTGTGACTTCATTATACATAAGTTTGCCAGACATAAGCAGAA  788

seq1  TTTTGCAGTAAGCACAATTTTGCTTCATTGAATACATTGTATATGATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGTAAGCACAATTTTGCTTCATTGAATACATTGTATATGATAAA  838

seq1  TTGTCAAATTTAAGCATGTTTGCCAATTACATATTTTGGTTTTAGTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAATTTAAGCATGTTTGCCAATTACATATTTTGGTTTTAGTCCTT  888

seq1  AAAGTAATGGACATGTTGCTGAACATTATACTATCTAATAATAACGAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATGGACATGTTGCTGAACATTATACTATCTAATAATAACGAACA  938

seq1  ACTTAATAAACCTCTTTGTATTCGGAAGGTACATATTTTATCATTTATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAACCTCTTTGTATTCGGAAGGTACATATTTTATCATTTATTT  988

seq1  TCAAACCTGTTCCTTTTGCAAAGGATGTAGAACATAAGAATGCATGACCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTGTTCCTTTTGCAAAGGATGTAGAACATAAGAATGCATGACCC  1038

seq1  ATGTGGAACAGAGATGATTGTTTTCCTTGAGAGACAGCCAGAACCTTAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAACAGAGATGATTGTTTTCCTTGAGAGACAGCCAGAACCTTAAA  1088

seq1  CTACCTGTAGAATTC  1115
      |||||||||||||||
seq2  CTACCTGTAGAATTC  1103


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