BAC Information

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BAC

Clone NameB6Ng01-130H06
Chromosome3 (Build37)
Map Location 111,225,608 - 111,226,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130H06.bB6Ng01-130H06.g
ACCDH931761DH931762
length1,1671,202
definitionDH931761|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H06, 5' end.DH931762|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaactttcagagactgtagtggtttgaatgaaaatcatcgccac
aggttcatagaaatggcactcttaggaggtgtggccttgttggaagaagt
gtgtcacttgggggggcaggctttgaagtttcaaaagctcagggggagtc
caatgtcattctttttgctgcctgtggatcaggatgttcaactctcagtc
gttctccagcaccaagtctgcctgcatgccacatgcttcctgccatgaca
atagactaaacctttgactgtaacccaatctaaagttttcctttataaga
gttgccatggtcacagtatctcttcaccacagcaataacaaccctaagac
aaagacctttctttaggtttagagaagtggttctcaacctttctctgacc
ctttaatatagttcctcatgttgtagcaacccccaaccataaaattattt
caccgctagttcagaactgtattttgatagttatgaattgtaagtatctg
atatgcaggatatttaatacatgaccctgaccccccaaaagggatgtaat
ctacaggttgagaactgctggtttagagaaattaattttttatgtgtatg
tttgtgtgttcctgtgtatatgggttcatgtgtacatgtgcatgctaagt
ataaaaaccagagaattaactgtagtgtcattcctcaggtactgtccacc
tggtttgtttgttttttgagactgtctctcattggcttacagcttgctaa
agtaggcaaggctgtctgctggatctctgtctccccagggctataacgtg
cacagccattatgcctgttatttgcacttggcttctggggatcaaactca
ggtcctcctgtttgcaaggcaagcactttaccatcttcctagtcccactg
tttagaaaactatatgtgtactcttacgctaaatgtttacctttactagt
agcaaatgttgaaattgtgtgcagagtacttttatacatctttaaatttc
ttagatgtattttgtatgtatgcacacacatgtgctttggtgcatgagtc
agagggcattcaagggaatgttcctccccttcaacgcatgttgatcctgt
ggatcagactcaggtagtcagcttgggcagcagcacgttaacccggtcat
ttctataccatagccta
gaattcttctggtattttggctcctttttgccacttctgtggactcatgc
taattcagtggatcctcatggattcttctggttcaagctgctgctattga
ttcatgtttagtgttttgaactggactggtgatatcctgacaataaagat
tggaatcactccaaagaacaacttctaaataagtccacatctgttgtggg
aaatattaaaacaggaactaaaacacgttcctgcactagtgcctacaaac
gacaggccacaggactccagccaggtgatctcactctcatggtctcttgg
cctggcaactctccagtcctgtaggtccacagggctcctgtagggccatc
tctatggtgggagtcacctgagcatatcttgctataatgcaacgccccat
gtaccccatgatcagccatctcaacacctaattacccagtagaatcaaga
ctcttaaagtttaattaatcattcagattttatgtaccaataaaattaca
atttataagataccaataccaatggaatcaccatccctgacctaaagctt
tactacagagcaattgtgatttactgcatggtactggtatagcaacagac
aagtagaccaatggaatacaattgaacatccagaaatgaacccacacacc
tatggtcacttgatctttgactagggaactaaaaccatcgagtgaaaaaa
aagacagcattttcaaaaaatgctactggcacactggtggttatcatgta
gaagaatgtgaattgatccattccttatctccttgtgaaatctaagtgga
tcaaggaactccacataaaaaccagagacactgaaactttgtagaggaga
agtggggaaatgcctcgagaaatggcacaggggaaaaattcctgaataga
cagcaatggctgtgctgtaagatcaagaatgacaaatgggatctcatgaa
ccgcaagcttctgtaggcaaaataaccgtcataaaacaaaaagccacaaa
gattgggaagatcttaccttctaatcagtacggggataatatccatatta
taagactcagaggggactctcggaaatcatatcccttttaaatgggccga
gctgaacaagaattcccacttgatataccaatggcttgaatcctgaaaag
gtctcgcatccttaactcctgggatctacacaactcagcacacccgtgtg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111225608_111226781
seq2: B6Ng01-130H06.b_44_1210

seq1  GAATTCCAACTTTCAGAGACTGTAGTGGTTTGAATGAAAATCATCGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTTTCAGAGACTGTAGTGGTTTGAATGAAAATCATCGCCAC  50

seq1  AGGTTCATAGAAATGGCACTCTTAGGAGGTGTGGCCTTGTTGGAAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATAGAAATGGCACTCTTAGGAGGTGTGGCCTTGTTGGAAGAAGT  100

seq1  GTGTCACTTGGGGGGGCAGGCTTTGAAGTTTCAAAAGCTCAGGGGGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACTTGGGGGGGCAGGCTTTGAAGTTTCAAAAGCTCAGGGGGAGTC  150

seq1  CAATGTCATTCTTTTTGCTGCCTGTGGATCAGGATGTTCAACTCTCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCATTCTTTTTGCTGCCTGTGGATCAGGATGTTCAACTCTCAGTC  200

seq1  GTTCTCCAGCACCAAGTCTGCCTGCATGCCACATGCTTCCTGCCATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAGCACCAAGTCTGCCTGCATGCCACATGCTTCCTGCCATGACA  250

seq1  ATAGACTAAACCTTTGACTGTAACCCAATCTAAAGTTTTCCTTTATAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTAAACCTTTGACTGTAACCCAATCTAAAGTTTTCCTTTATAAGA  300

seq1  GTTGCCATGGTCACAGTATCTCTTCACCACAGCAATAACAACCCTAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCATGGTCACAGTATCTCTTCACCACAGCAATAACAACCCTAAGAC  350

seq1  AAAGACCTTTCTTTAGGTTTAGAGAAGTGGTTCTCAACCTTTCTCTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCTTTCTTTAGGTTTAGAGAAGTGGTTCTCAACCTTTCTCTGACC  400

seq1  CTTTAATATAGTTCCTCATGTTGTAGCAACCCCCAACCATAAAATTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATATAGTTCCTCATGTTGTAGCAACCCCCAACCATAAAATTATTT  450

seq1  CACCGCTAGTTCAGAACTGTATTTTGATAGTTATGAATTGTAAGTATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCTAGTTCAGAACTGTATTTTGATAGTTATGAATTGTAAGTATCTG  500

seq1  ATATGCAGGATATTTAATACATGACCCTGACCCCCCAAAAGGGATGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAGGATATTTAATACATGACCCTGACCCCCCAAAAGGGATGTAAT  550

seq1  CTACAGGTTGAGAACTGCTGGTTTAGAGAAATTAATTTTTTATGTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGTTGAGAACTGCTGGTTTAGAGAAATTAATTTTTTATGTGTATG  600

seq1  TTTGTGTGTTCCTGTGTATATGGGTTCATGTGTACATGTGCATGCTAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTTCCTGTGTATATGGGTTCATGTGTACATGTGCATGCTAAGT  650

seq1  ATAAAAACCAGAGAATTAACTGTAGTGTCATTCCTCAGGTACTGTCCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACCAGAGAATTAACTGTAGTGTCATTCCTCAGGTACTGTCCACC  700

seq1  TGGTTTGTTTGTTTTTTGAGACTGTCTCTCATTGGCTTACAGCTTGCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTTTGTTTTTTGAGACTGTCTCTCATTGGCTTACAGCTTGCTAA  750

seq1  AGTAGGCAAGGCTGTCTGCTGGATCTCTGTCTCCCCAGGGCTATAACGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCAAGGCTGTCTGCTGGATCTCTGTCTCCCCAGGGCTATAACGTG  800

seq1  CACAGCCATTATGCCTGTTATTTGCACTTGGCTTCTGGGGATCAAACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCATTATGCCTGTTATTTGCACTTGGCTTCTGGGGATCAAACTCA  850

seq1  GGTCCTCCTGTTTGCAAGGCAAGCACTTTACCATCTTCCTAGTCCCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCCTGTTTGCAAGGCAAGCACTTTACCATCTTCCTAGTCCCACTG  900

seq1  TTTAGAAAACTATATGTGTACTCTTACGCTAAAATGTTTACCTTTACTAG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TTTAGAAAACTATATGTGTACTCTTACGCT-AAATGTTTACCTTTACTA-  948

seq1  GTAGCAAATGTTGAAATTGTGGTGCAGAGTACTTTTTATTACATCTTTAA  1000
      |||||||||||||||||||| |||||||||||||||   |||||||||||
seq2  GTAGCAAATGTTGAAATTGT-GTGCAGAGTACTTTT--ATACATCTTTAA  995

seq1  ATTTCTTAAGATGTATTTTGTATGTATGCACACACATGTGCTTTGGTGCA  1050
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTT-AGATGTATTTTGTATGTATGCACACACATGTGCTTTGGTGCA  1044

seq1  TGAGGTCAGAGGGCAATTCAAGGGAATG-TCCTCTCCTTCCAC-CATGTG  1098
      ||| |||||||||| ||||||||||||| ||||| ||||| || ||||| 
seq2  TGA-GTCAGAGGGC-ATTCAAGGGAATGTTCCTCCCCTTCAACGCATGTT  1092

seq1  GATCCTGGGGATCAGACTCAAGTTGTCAGCCTGGGCAGCAAGCACCTTTA  1148
      ||||||| |||||||||||| || |||||| |||||||| ||||| || |
seq2  GATCCTGTGGATCAGACTCAGGTAGTCAGCTTGGGCAGC-AGCACGTTAA  1141

seq1  CCCGGTCATTTCATAACCATAGCCTA  1174
      ||||||||||||   |||||||||||
seq2  CCCGGTCATTTCTATACCATAGCCTA  1167