BAC Information

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BAC

Clone NameB6Ng01-131E21
Chromosome3 (Build37)
Map Location 14,967,272 - 14,968,424
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2
Downstream geneEG634323, LOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131E21.bB6Ng01-131E21.g
ACCDH932395DH932396
length1,2251,138
definitionDH932395|Mus musculus domesticus DNA, BAC clone: B6Ng01-131E21, 5' end.DH932396|Mus musculus domesticus DNA, BAC clone: B6Ng01-131E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcaaggaagttacctattcagtaactaattaagcattacaaaa
gacagagccaacagctcagggcaggtctgcaaaatgtttactaggacagt
aaggacagtcttaatcaaacaagggtttaccatgagaaaagttagggaat
cccactgagacaggtttcttcactaggcccaaagaaatcaggcagaacta
tagagcataaataaattgtatgccacagtccagcctttcttttttatatt
aataacaggaaggagatgtagcctcccacaagcctgaagcaggctgagcc
agaccttgactttgcttgccactaaggagatcacctagggtggagcctgc
ctccctggatcactctattgttctgccactgccgctgctgctaccttctg
ggagtgggcctagctgttccaaagtctacatctgatcctacatgtggtca
cctgcagctgggctccaaagatgatttggagggaatgggcttttccctct
cctttataaagcgtgtccgccattaaaaatttgaaccttgagcagactag
cttgtcttggttccattatttctctacccgcctagattccctcttctctt
ccagttccaagatgtcttccaggctcgaacccggacatgagagctgcagg
ccggccccaacaagcaagtctccaaaaaatcataagtaatactttacaac
aaattcgctgcctacaatagaactaatatccatggtctcacgcatgtata
ttttctatattaaataatattcaaattgacaaaacctgtattttgtgaag
gatttcccacacagtctctggctgaatgcttgaggattgttaaggcagag
gattcttcagctctttgtgggctcttccaacagtgtgtctggttctaaga
aatggcctaattaaatcagtataacatagagaagaatgtctgtggctcac
agacactatgtacccttatgatgcagactatggctgcacctacaaaaggg
agtacatcttctagactagatgtacagaaaagcagagatgagaccatgct
gacggagtatgtgaaggaagacgcatttggaagcacaagaattccctcag
atgatggagtaatacttcttctgatgtcttttaggagggtttggatacta
tttttgatacacctgcgcattcagaaccttaggtctcggatagaaacatt
caattttatgaagggtttgaaaatg
gaattcattactgagctatcttgcccaggagaagagcaaggcttggggtt
gtaggtctcatcaagcagtgacagtggactgctctgtggaaattctggaa
agaggacctgcaatgtgacccagaacttaaaggatcaatctgggtttggc
cagtcgccagtgttaggcctaagcgtcagctcggccttcctgcctctgct
cttttagatgttttggtgcgattgcagctgttaatctttaatggatttgc
tagctctctcaagaaaaatttttcttgcctctttctggaattttcttccg
ctggtggaggtgagatataaagatatagacaagaagaacagtatttctag
cagaagagtacactgtgaatctattcattacctgcagggccatcaccaat
tcaggaaggaatggcctgaagtgacaaatacaggaatgttctactttttt
ctgtgctcagaattcagtttagcaggcttttgtgattcttcccatatttc
tgcctgggttgacatcctctagtctgactataagaaaaagaaatgtcaac
tttttatcctccatcatcttttcctaaacctagagtattctccagttctt
ggacaccttttgccctcaaatttttgcctttaccccctaaagcaaggtgt
tagtctgttgtaatggatttaataaatccaactcagtgtccggtaaatag
atgatgttccatagtgattgaaattgactacctatatgatctgttctgtg
gcaatttttcacaagagatgtcttgggccacactttagttaaaaacagta
ttggagtgtttattttaatttaattggaaatatatagaatatggttgttt
ctcattgcaaaaatacatgtaaggtctagaaaacatctgtaaaattataa
ataaggcaaagaagaaatttaaattcctctatccagcattataccccacc
cctatagtcgtctatggatctgttacataactctttaaatgagaaagagt
aaatgaaaatcataatttaaaagtccatgagtaggtcagccttgggaggt
aggaatacgctgccatcttcctttgtttccccctacttacctgttaagtt
cccatcccccccccccccccaggttaacttcctcatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14967272_14968424
seq2: B6Ng01-131E21.g_66_1203

seq1  GAATTCATTACTGAGCTATCTTGCCCAGGAGAAGAGCAAGGCTTGGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTGAGCTATCTTGCCCAGGAGAAGAGCAAGGCTTGGGGTT  50

seq1  GTAGGTCTCATCAAGCAGTGACAGTGGACTGCTCTGTGGAAATTCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCTCATCAAGCAGTGACAGTGGACTGCTCTGTGGAAATTCTGGAA  100

seq1  AGAGGACCTGCAATGTGACCCAGAACTTAAAGGATCAATCTGGGTTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCTGCAATGTGACCCAGAACTTAAAGGATCAATCTGGGTTTGGC  150

seq1  CAGTCGCCAGTGTTAGGCCTAAGCGTCAGCTCGGCCTTCCTGCCTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGCCAGTGTTAGGCCTAAGCGTCAGCTCGGCCTTCCTGCCTCTGCT  200

seq1  CTTTTAGATGTTTTGGTGCGATTGCAGCTGTTAATCTTTAATGGATTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGATGTTTTGGTGCGATTGCAGCTGTTAATCTTTAATGGATTTGC  250

seq1  TAGCTCTCTCAAGAAAAATTTTTCTTGCCTCTTTCTGGAATTTTCTTCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTCTCAAGAAAAATTTTTCTTGCCTCTTTCTGGAATTTTCTTCCG  300

seq1  CTGGTGGAGGTGAGATATAAAGATATAGACAAGAAGAACAGTATTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGAGGTGAGATATAAAGATATAGACAAGAAGAACAGTATTTCTAG  350

seq1  CAGAAGAGTACACTGTGAATCTATTCATTACCTGCAGGGCCATCACCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGTACACTGTGAATCTATTCATTACCTGCAGGGCCATCACCAAT  400

seq1  TCAGGAAGGAATGGCCTGAAGTGACAAATACAGGAATGTTCTACTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGGAATGGCCTGAAGTGACAAATACAGGAATGTTCTACTTTTTT  450

seq1  CTGTGCTCAGAATTCAGTTTAGCAGGCTTTTGTGATTCTTCCCATATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCAGAATTCAGTTTAGCAGGCTTTTGTGATTCTTCCCATATTTC  500

seq1  TGCCTGGGTTGACATCCTCTAGTCTGACTATAAGAAAAAGAAATGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGTTGACATCCTCTAGTCTGACTATAAGAAAAAGAAATGTCAAC  550

seq1  TTTTTATCCTCCATCATCTTTTCCTAAACCTAGAGTATTCTCCAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCCTCCATCATCTTTTCCTAAACCTAGAGTATTCTCCAGTTCTT  600

seq1  GGACACCTTTTGCCCTCAAATTTTTGCCTTTACCCCCTAAAGCAAGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTTTTGCCCTCAAATTTTTGCCTTTACCCCCTAAAGCAAGGTGT  650

seq1  TAGTCTGTTGTAATGGATTTAATAAATCCAACTCAGTGTCCGGTAAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGTTGTAATGGATTTAATAAATCCAACTCAGTGTCCGGTAAATAG  700

seq1  ATGATGTTCCATAGTGATTGAAATTGACTACCTATATGATCTGTTCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTCCATAGTGATTGAAATTGACTACCTATATGATCTGTTCTGTG  750

seq1  GCAATTTTTCACAAGAGATGTCTTGGGCCACACTTTAGTTAAAAACAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTTCACAAGAGATGTCTTGGGCCACACTTTAGTTAAAAACAGTA  800

seq1  TTGGAGTGTTTTATTTTAATTTAATTGGAAATATATAGAATATGGTTGTT  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTG-TTTATTTTAATTTAATTGGAAATATATAGAATATGGTTGTT  849

seq1  TCTCATTGCAAAAATTACATGTAAGGTCTAGAAAACATCTGTAAAATTAT  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCATTGCAAAAA-TACATGTAAGGTCTAGAAAACATCTGTAAAATTAT  898

seq1  AAATAAGGCAAAGAAGAAATTTAAAATTCCTCTATCCAGCATTATACCCC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATAAGGCAAAGAAGAAATTT-AAATTCCTCTATCCAGCATTATACCCC  947

seq1  ACCCCTATAGTCGGTCTATGGATCTGTTAACATACATCTTTAAATGAGAC  1000
      |||||||||||| ||||||||||||||| |||||  ||||||||||||| 
seq2  ACCCCTATAGTC-GTCTATGGATCTGTT-ACATAACTCTTTAAATGAGAA  995

seq1  AGAGTAAATGAAAATCATATTTTAAAAGTCCATGAGTAGGTTCAGCTTTG  1050
      ||||||||||||||||||| |||||||||||||||||||| ||||| |||
seq2  AGAGTAAATGAAAATCATAATTTAAAAGTCCATGAGTAGG-TCAGCCTTG  1044

seq1  GAAGTTAGGAATTACGCTGCCATCTTTCTTTGTTTTCTCTCTCTCTTA-C  1099
      | || |||||| |||||||||||||| ||||| |||| | ||  |||| |
seq2  GGAGGTAGGAA-TACGCTGCCATCTTCCTTTG-TTTCCCCCT-ACTTACC  1091

seq1  TGTTTAGTTCCCCATTCCCCCCCCCCCCCCCCCCAGGTTCATCTTCCTCC  1149
      |||| |||| |||||    |||||||||||||||||||| | |||||| |
seq2  TGTTAAGTT-CCCAT----CCCCCCCCCCCCCCCAGGTT-AACTTCCT-C  1134

seq1  ATGT  1153
      ||||
seq2  ATGT  1138