BAC Information

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BAC

Clone NameB6Ng01-131F23
Chromosome3 (Build37)
Map Location 29,796,900 - 29,798,032
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1527, 6130401L20Rik, LOC100040676
Downstream geneEvi1, Mds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131F23.bB6Ng01-131F23.g
ACCDH932446DH932447
length1,1511,143
definitionDH932446|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F23, 5' end.DH932447|Mus musculus domesticus DNA, BAC clone: B6Ng01-131F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggattcagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggagagctagagaagtacccagagctaagggatcttcaccctatagt
ggacacattatgactaaccagtaccctgagctcttgactctagctgcata
tgtatcaaagaatgctagtcggcatcactgaagagagccattggacacct
aacttgtgtcctgtacaggaacgccaggctaaagtgaattgtgctaggta
c
gaattctagaccgaggtgccagagtgcaatgctgggaactgaactgaggt
tcttcactgcccgagtgcatgctgggaactgaactgagattcttcactgc
ccgagtgcatgctgggaactgaactgagattcttcactgcccgagtgcaa
tgctgggaactgaactgagattcttcactgcccgagtgcatgctgggaac
tgaactgagattcttcactgcccgagtgcatgctgggaactgaactgagt
ttcttcactgcccgagtgcatgctgggaaccaaactggggtttcttcaca
acagtagagatctctgacctgtagttctctcacaaaactcagggaccttc
tcataattaatttaaaatgttgttttctttgaggattttatacactggac
atatgccttaactcactttgagagtcaattctcaacactatttcctctga
cttggatctatgagtatatgtaaattgcaaattaataaataataattaat
agtattccacttagaacttttaaagcatatcttctataattgtaatgttt
ttcttttttcttgtaattgtcaaagatattgttttctgttttatttttgg
tctggtttgttctttatttgcttgttttttaatttgatattactacaata
ctccaaggtatctttatgtagttgattcaaatcaagtctttcttaaagtt
atcattttaacccataccaaattgtgcccatggctgtgagttgcagttca
tgggaaaaagccatcatatgttcgacttagtacctagtgagctgtaggaa
ggtagtctgatctttgacgccattgagaatgttagggttctattctgaca
ccccattcctccaggtcttgtctgcagaggacatacttctgatgacattt
ttagctactctcttcagatactgaagaaactgtgacatgaagaagatgta
cgttcaaatttcctttcccttactgtcaccatcctagcgcctgccactat
tgcttgaagtaaaattcaaggctctaagataggtgggctgtgattcaact
tggcaccaaagcccgaacctttggccctccaggtgggtggcaagttcatt
aaataggcctcctctcgtattgcccagatatcgaaaaatggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29796900_29798032
seq2: B6Ng01-131F23.g_68_1210 (reverse)

seq1  AACCATTTTTTCTGATCTTGGCAA-ATCAGAGAAGGCC-ATTTAATGGAC  48
      ||||||||||    |||| ||||| |  |||| ||||| |||||||| ||
seq2  AACCATTTTTCGATATCTGGGCAATACGAGAGGAGGCCTATTTAATGAAC  50

seq1  TTTGCACCCACCTGGAAGGGCAAAGTTTCTGTCTTT-GTGCCCAGTTG-A  96
      ||  |||||||||||| || ||||| ||| | |||| ||||| ||||| |
seq2  TTGCCACCCACCTGGAGGGCCAAAGGTTCGGGCTTTGGTGCCAAGTTGAA  100

seq1  TCACAGCCCACCTATCTTAGAGCCTTGAATTTTACTTCAAGCAATAGT-G  145
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCACAGCCCACCTATCTTAGAGCCTTGAATTTTACTTCAAGCAATAGTGG  150

seq1  CA-GCGCTAGGAT-GTGACAGTAAGGGAAA-GAAATTTGAACGTACATCT  192
      || |||||||||| |||||||||||||||| |||||||||||||||||||
seq2  CAGGCGCTAGGATGGTGACAGTAAGGGAAAGGAAATTTGAACGTACATCT  200

seq1  TCTTCATGTCACAGTTTC-TCAGTATCTGAAGAGAGTAGCTAAAAATGTC  241
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTTCATGTCACAGTTTCTTCAGTATCTGAAGAGAGTAGCTAAAAATGTC  250

seq1  ATCAGAAGTATGTCCTCTGCAGACAAGACCTGGAGGAATGGGGTGTCAGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGTATGTCCTCTGCAGACAAGACCTGGAGGAATGGGGTGTCAGA  300

seq1  ATAGAACCCTAACATTCTCAATGGCGTC-AAGATCAGACTACCTTCCTAC  340
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAGAACCCTAACATTCTCAATGGCGTCAAAGATCAGACTACCTTCCTAC  350

seq1  AGCTCACTAGGTACTAAGTCGAACATATGATGGCTTTTTCCCATGAACTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTAGGTACTAAGTCGAACATATGATGGCTTTTTCCCATGAACTG  400

seq1  CAACTCACAGCCATGGGCACAATTTGGTATGGGTTAAAATGATAACTTTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACAGCCATGGGCACAATTTGGTATGGGTTAAAATGATAACTTTA  450

seq1  AGAAAGACTTGATTTGAATCAACTACATAAAGATACCTTGGAGTATTGTA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTTGATTTGAATCAACTACATAAAGATACCTTGGAGTATTGTA  500

seq1  GTAATATCAAATTAAAAAACAAGCAAATAAAGAACAAACCAGACCAAAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATCAAATTAAAAAACAAGCAAATAAAGAACAAACCAGACCAAAAA  550

seq1  TAAAACAGAAAACAATATCTTTGACAATTACAAGAAAAAAGAAAAACATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGAAAACAATATCTTTGACAATTACAAGAAAAAAGAAAAACATT  600

seq1  ACAATTATAGAAGATATGCTTTAAAAGTTCTAAGTGGAATACTATTAATT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATAGAAGATATGCTTTAAAAGTTCTAAGTGGAATACTATTAATT  650

seq1  ATTATTTATTAATTTGCAATTTACATATACTCATAGATCCAAGTCAGAGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATTAATTTGCAATTTACATATACTCATAGATCCAAGTCAGAGG  700

seq1  AAATAGTGTTGAGAATTGACTCTCAAAGTGAGTTAAGGCATATGTCCAGT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTTGAGAATTGACTCTCAAAGTGAGTTAAGGCATATGTCCAGT  750

seq1  GTATAAAATCCTCAAAGAAAACAACATTTTAAATTAATTATGAGAAGGTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAATCCTCAAAGAAAACAACATTTTAAATTAATTATGAGAAGGTC  800

seq1  CCTGAGTTTTGTGAGAGAACTACAGGTCAGAGATCTCTACTGTTGTGAAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTTTTGTGAGAGAACTACAGGTCAGAGATCTCTACTGTTGTGAAG  850

seq1  AAACCCCAGTTTGGTTCCCAGCATGCACTCGGGCAGTGAAGAAACTCAGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAGTTTGGTTCCCAGCATGCACTCGGGCAGTGAAGAAACTCAGT  900

seq1  TCAGTTCCCAGCATGCACTCGGGCAGTGAAGAATCTCAGTTCAGTTCCCA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCCAGCATGCACTCGGGCAGTGAAGAATCTCAGTTCAGTTCCCA  950

seq1  GCATGCACTCGGGCAGTGAAGAATCTCAGTTCAGTTCCCAGCATTGCACT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACTCGGGCAGTGAAGAATCTCAGTTCAGTTCCCAGCATTGCACT  1000

seq1  CGGGCAGTGAAGAATCTCAGTTCAGTTCCCAGCATGCACTCGGGCAGTGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAGTGAAGAATCTCAGTTCAGTTCCCAGCATGCACTCGGGCAGTGA  1050

seq1  AGAATCTCAGTTCAGTTCCCAGCATGCACTCGGGCAGTGAAGAACCTCAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCAGTTCAGTTCCCAGCATGCACTCGGGCAGTGAAGAACCTCAG  1100

seq1  TTCAGTTCCCAGCATTGCACTCTGGCACCTCGGTCTAGAATTC  1133
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCCCAGCATTGCACTCTGGCACCTCGGTCTAGAATTC  1143