BAC Information

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BAC

Clone NameB6Ng01-131K19
Chromosome3 (Build37)18 (Build37)
Map Location 76,040,466 - 76,041,45945,553,835 - 45,554,391
singlet/doubletsingletsinglet
Overlap geneFstl5
Upstream geneSerpini2, Wdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131K19.bB6Ng01-131K19.g
ACCDH932672DH932673
length993914
definitionDH932672|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K19, 5' end.DH932673|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(76,040,466 - 76,041,459)(45,553,835 - 45,554,391)
sequence
gaattcaaccgaatagtgaggtgagacaaaatgcagcttacatctagaaa
gtcatgggataacatatttgaactccagagaattaagtagccagcaattt
tacttttttaaagcagaatgagagaacttatacctgcttgacgtgaagaa
atatttactaagcaaatgtgtcagaatctcttcagaacaccttatcagaa
gcactgaaaactaggaaatcatagatttttatagtcaagcccacaaaata
aataactagcaaccaagactgttatatgcagctgtggtatctttaaaagt
cagtcagaaaataaatgtttcaaatctaattacaaatcaaatgaatggcc
aatacccaagcattatacaagatacattaaggagttcttcaaagaaagga
agaaagacaatcatggcttcttagaaaaaaataaagatcatgagaaatag
ataaaaaaatgaaactaggaaaaatttaatatgtccaaaattaccaattt
ccaaagataaattaggagaaatggagatacaagagactatcaagatcaag
aatgggttaccacctttagaacttttgggcagtaaaatccagtaaaccca
tgaatattacaggttctaacaacttctcttgggtattctgcaggattaga
tagtaagaccttatgtaacataagaccctgacaaacaatccatatacttg
aaacagagaacaggattttcagcactcacagtcaaatgaaagtgatgatg
actttacctttggtagtacacctagagccttctagcacttcaattatcca
gtagtgacaaagcttccaggtcagtcttagtttgccactggtgttacaag
cattatgctagtaaacaactactttttgctaaatttgaggtcagctaccc
aagcaattgcatgtggaaccattatcagggcaagaaatgttgttagtagg
tcaaagacctttgtggggttgagtggagtaggattgggggggg
gaattcctgatctttccagaacttttatcattaatgggtgttggatcttg
tcaaatgctttttctacatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatgggttttcatatattaaacc
atccctgcatccctggaatacaacctacttggtcagggtggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcaatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttgtattttt
ggggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgctggtgttttggattt
tcttcaggatctgttgttatgtctcccttttcagttctgatttttgttaa
ttaggatttttgtctctgtgccctctagtgagtctagctaaggtttatct
atcttgttgattttctcaaagaaccaactcctcatttggtcattctttga
atagttcttcttgtttcacttggttgatttcacccctgagtttgattatt
ttctgccgcctactcctcttgggtgattttctccttttttcaagagcttt
tagatgggttggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76040466_76041459
seq2: B6Ng01-131K19.b_46_1038 (reverse)

seq1  CCCCCCCCAATCCTACTCCACTCAACCCCACAAAGGTCTTTGACCTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCCCCCCCAATCCTACTCCACTCAACCCCACAAAGGTCTTTGACCTA-CT  49

seq1  AACAACATTTCTTGCCCTGATAATGGTTCCACATGCAATTGCTTGGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTTCTTGCCCTGATAATGGTTCCACATGCAATTGCTTGGGTAG  99

seq1  CTGACCTCAAATTTAGCAAAAAGTAGTTGTTTACTAGCATAATGCTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCAAATTTAGCAAAAAGTAGTTGTTTACTAGCATAATGCTTGTA  149

seq1  ACACCAGTGGCAAACTAAGACTGACCTGGAAGCTTTGTCACTACTGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTGGCAAACTAAGACTGACCTGGAAGCTTTGTCACTACTGGATA  199

seq1  ATTGAAGTGCTAGAAGGCTCTAGGTGTACTACCAAAGGTAAAGTCATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGTGCTAGAAGGCTCTAGGTGTACTACCAAAGGTAAAGTCATCAT  249

seq1  CACTTTCATTTGACTGTGAGTGCTGAAAATCCTGTTCTCTGTTTCAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCATTTGACTGTGAGTGCTGAAAATCCTGTTCTCTGTTTCAAGTA  299

seq1  TATGGATTGTTTGTCAGGGTCTTATGTTACATAAGGTCTTACTATCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATTGTTTGTCAGGGTCTTATGTTACATAAGGTCTTACTATCTAAT  349

seq1  CCTGCAGAATACCCAAGAGAAGTTGTTAGAACCTGTAATATTCATGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGAATACCCAAGAGAAGTTGTTAGAACCTGTAATATTCATGGGTT  399

seq1  TACTGGATTTTACTGCCCAAAAGTTCTAAAGGTGGTAACCCATTCTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGATTTTACTGCCCAAAAGTTCTAAAGGTGGTAACCCATTCTTGAT  449

seq1  CTTGATAGTCTCTTGTATCTCCATTTCTCCTAATTTATCTTTGGAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGTCTCTTGTATCTCCATTTCTCCTAATTTATCTTTGGAAATTG  499

seq1  GTAATTTTGGACATATTAAATTTTTCCTAGTTTCATTTTTTTATCTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTGGACATATTAAATTTTTCCTAGTTTCATTTTTTTATCTATTT  549

seq1  CTCATGATCTTTATTTTTTTCTAAGAAGCCATGATTGTCTTTCTTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATCTTTATTTTTTTCTAAGAAGCCATGATTGTCTTTCTTCCTTT  599

seq1  CTTTGAAGAACTCCTTAATGTATCTTGTATAATGCTTGGGTATTGGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAACTCCTTAATGTATCTTGTATAATGCTTGGGTATTGGCCAT  649

seq1  TCATTTGATTTGTAATTAGATTTGAAACATTTATTTTCTGACTGACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGATTTGTAATTAGATTTGAAACATTTATTTTCTGACTGACTTTT  699

seq1  AAAGATACCACAGCTGCATATAACAGTCTTGGTTGCTAGTTATTTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACCACAGCTGCATATAACAGTCTTGGTTGCTAGTTATTTATTTT  749

seq1  GTGGGCTTGACTATAAAAATCTATGATTTCCTAGTTTTCAGTGCTTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTTGACTATAAAAATCTATGATTTCCTAGTTTTCAGTGCTTCTGA  799

seq1  TAAGGTGTTCTGAAGAGATTCTGACACATTTGCTTAGTAAATATTTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGTTCTGAAGAGATTCTGACACATTTGCTTAGTAAATATTTCTTC  849

seq1  ACGTCAAGCAGGTATAAGTTCTCTCATTCTGCTTTAAAAAAGTAAAATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCAAGCAGGTATAAGTTCTCTCATTCTGCTTTAAAAAAGTAAAATTG  899

seq1  CTGGCTACTTAATTCTCTGGAGTTCAAATATGTTATCCCATGACTTTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTACTTAATTCTCTGGAGTTCAAATATGTTATCCCATGACTTTCTA  949

seq1  GATGTAAGCTGCATTTTGTCTCACCTCACTATTCGGTTGAATTC  994
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGCTGCATTTTGTCTCACCTCACTATTCGGTTGAATTC  993

seq1: chr18_45553835_45554391
seq2: B6Ng01-131K19.g_431_983 (reverse)

seq1  TGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGGAAATTCACCCAAG  50
      || |||| |||||||||||||| | |||||||||  |||| |||||||||
seq2  TGCCAACCCATCTAAAAGCTCTTG-AAAAAAGGA--GAAAATCACCCAAG  47

seq1  AGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGT  100
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  AGGAGTAGGCGGCAGAAAATAATCAAACTCAGGGGTGAAATCAACCAAGT  97

seq1  AGAAACAAGAAGAACTATTCAAAGAATTAACCAAATGAGGAGTTGGTTCT  150
       ||||||||||||||||||||||||| | |||||||||||||||||||||
seq2  -GAAACAAGAAGAACTATTCAAAGAA-TGACCAAATGAGGAGTTGGTTCT  145

seq1  TTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAGAGGG  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTGAGAAAATCAACAAGATAGATAAA-CCTTAGCTAGACTCACTAGAGGG  194

seq1  CACAGAGAC-AAAATCCTAATTAAC-AAAATCAGAACTGAAAAGGGAGAC  248
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  CACAGAGACAAAAATCCTAATTAACAAAAATCAGAACTGAAAAGGGAGAC  244

seq1  ATAACAACAGATCCTGAAG-AAATCCAAAACACCATCAGATCCTTCTACA  297
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  ATAACAACAGATCCTGAAGAAAATCCAAAACACCAGCAGATCCTTCTACA  294

seq1  AAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTT  344

seq1  CTGGACAGATACTAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCT  397
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCT  394

seq1  AAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCC  447
      ||||||||||||||||||  || ||||| |||||||||||||||||||||
seq2  AAACAGTCCCATATCCCCCCAA-AAATACAAGCAGTTATTAATAGTCTCC  443

seq1  CAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAG  493

seq1  ACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGAT  543

seq1  AGAAGTAGAA  557
      ||||||||||
seq2  AGAAGTAGAA  553