BAC Information

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BAC

Clone NameB6Ng01-131L17
Chromosome3 (Build37)
Map Location 17,972,860 - 17,973,855
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L17.bB6Ng01-131L17.g
ACCDH932714DH932715
length9881,237
definitionDH932714|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L17, 5' end.DH932715|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaattttctatggcaaatagtataacttctttatgaatacat
gtcagaaatgcctgataagtaagtaggtcagattaacccaaggagagtat
actcaaatagaaatcagaattaacccaaacagagtatatcaatagaaatc
atataggagaaatttgcattaacatagaaaaaagcaaaatctgtttgcag
cttaggtttttctctggagatttgttgaatcttattatttcctgtctctt
taatccaaacataaacactaaatcctaaagtcatggtactcatccatcag
tagctagttgagaggataaaagaataacaaactgtagctgctaaggttca
ttacttcatagtagaaatggcagcagcagtatatgagaacccttttaccc
acaatcagtatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatacaaaaaaaggaaataaatgtagcctc
tctatgcttagaaaactcagtgcagtcactataatttgagcattgtgtat
cctgtctaaaacttgtcctgaaatctgctactattggtggtgttgcaagg
tgagactttaataggtgttgggtttgctctgttatcaatctcttgaaaat
atacttactggctgctagaaaagtggattactatgacagaagacttgctc
tctgatttttcctttttgtaaatgcatcaacatgccctgtagttttctgt
ttttgataacagcacaaggccccatcaatgccaggttctagactatttgg
actccagattcacaagtcaaagaaatgctttttctttatcattacccaga
cttcagtattcgtgacagcattgataccatacagagaagacaaagaaatg
tgagctgagaagcgagtgtgtaagtgtttgggtataggtgttcctttgaa
cattgaatttttgagagtatgagatgactttcaaattt
gaattcaattaaaaggaaggtacaacataccagaacttgtgagatactat
gaaagcagtgctaataggaaaattgatagtgctgtttttataaaagaact
ggagagatctcatactaacaacttaacagcacacctgaaactccagaaca
aacagaagcaaacacactaaagaagagtagacagcggaaaatattcacac
tttcttaatagcgttctcacgcccggccaggaagaacacaacagaccaga
atcttctgcggcaaaactttattgcttacatcttcaggagctaggagcgc
aaactcccagccccaaaagcgaaagccaccccaatcttacatctttagga
gccagagctccggcacgccaaagcgcagagcgcgctctattgtttacatc
tttaggagcaagcgagcaggcgccagagccagagagagaaaagagagaga
atggcggaaaccccgtcccctttaaggaggagttatccttcgcttaggac
gcatcactccctgattggctgcagcccatggccgagctgacgttcacggg
aaaggcagagtacaagtagtcgtaaaatacccttggcacatgcgcagatt
atttgtttaccacttagaacacaggatgtcagcgccatcttgtgacggcg
aatgtgggggcggctcccaacatctccccattttcttttaataagagcaa
ataggccacccatattaatgagagtggagatagaggtcaaatccccagtg
tgtaggtaaaggagccgtacacataacctcctcccaggctcatcacccag
aggggtcctggtctggtcccgtgttgtttttcctgggggaaggacacttg
aacactcaaccttcttgaaagatgacatgtctccctagaataggctcatt
ttatgccgcagagcccttctattgcagtgcttagccgtgcaactctctca
gctgctgaagcacactcactctatcccgtgcaatgagactagcctcatgg
gatatagagctgagtggccagcgacttattgcctagcatagatatatcaa
ggggaagctccattttctagtcctgcaagcgcctggcaataccacctgtt
cctctagttggtcttaagcctaagaacaatcagaaggcccacctaatcca
cgcgcaaggtatccaataatcaattccaccattctttaagaaagggaatg
ctgtgagaatgcccaattgtgtgatatacttagagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17972860_17973855
seq2: B6Ng01-131L17.b_48_1035 (reverse)

seq1  AAATATGAAAGTCATACTCAAACTCTCAAAAAATTCAAATGTTACAAGGA  50
      |||| |||||||||| |||| |||||| |||||||| ||||||  |||||
seq2  AAATTTGAAAGTCAT-CTCATACTCTC-AAAAATTC-AATGTTCAAAGGA  47

seq1  ACACCTATACCCAAACACTTACACCACTTCGCTTCTCAGCTCACATTTCT  100
      ||||||||||||||||||||||| ||| ||||||||||||||||||||| 
seq2  ACACCTATACCCAAACACTTACA-CAC-TCGCTTCTCAGCTCACATTTC-  94

seq1  TTTGTCTTCTCTTGTTTGGTATTCAATGCTGTCATGAAATACTGAAGTCT  150
      ||||||||||| ||| ||||| |||||||||||| | |||||||||||||
seq2  TTTGTCTTCTC-TGTATGGTA-TCAATGCTGTCACG-AATACTGAAGTCT  141

seq1  GGGTAATTGATAAAG-AAAAGCATTTCTTTGACTTGTGAATCTGGAGTCC  199
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGTAA-TGATAAAGAAAAAGCATTTCTTTGACTTGTGAATCTGGAGTCC  190

seq1  AAATAGTCTAAGAACCTGGCATTGATGGGGCCTTGTGCTGTTATC-AAAA  248
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  AAATAGTCT-AGAACCTGGCATTGATGGGGCCTTGTGCTGTTATCAAAAA  239

seq1  CAGAAAACTACAGGGCATGTTGATGCATTTAC-AAAAGGAAAAATCAGAG  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGAAAACTACAGGGCATGTTGATGCATTTACAAAAAGGAAAAATCAGAG  289

seq1  AGCAAGTCTTCTGTCATAGTAATCCACTTTTCTAGCAGCCAGTAAGTATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCTTCTGTCATAGTAATCCACTTTTCTAGCAGCCAGTAAGTATA  339

seq1  TTTTCAAGAGATTGATAACAGAGCAAACCCAACACCTATTAAAGTCTCAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGAGATTGATAACAGAGCAAACCCAACACCTATTAAAGTCTCAC  389

seq1  CTTGCAACACCACCAATAGTAGCAGATTTCAGGACAAGTTTTAGACAGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAACACCACCAATAGTAGCAGATTTCAGGACAAGTTTTAGACAGGA  439

seq1  TACACAATGCTCAAATTATAGTGACTGCACTGAGTTTTCTAAGCATAGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGCTCAAATTATAGTGACTGCACTGAGTTTTCTAAGCATAGAG  489

seq1  AGGCTACATCTATTTCCATTTTTTGTATATATATATATATATATATATAT  547
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  AGGCTACATTTATTTCCTTTTTTTGTATATATATATATATATATATATAT  539

seq1  ATATATATATATATATATATATATATATATATATATATATACTGATTGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATACTGATTGTG  589

seq1  GGTAAAAGGGTTCTCATATACTGCTGCTGCCATTTCTACTATGAAGTAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGGGTTCTCATATACTGCTGCTGCCATTTCTACTATGAAGTAAT  639

seq1  GAACCTTAGCAGCTACAGTTTGTTATTCTTTTATCCTCTCAACTAGCTAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTAGCAGCTACAGTTTGTTATTCTTTTATCCTCTCAACTAGCTAC  689

seq1  TGATGGATGAGTACCATGACTTTAGGATTTAGTGTTTATGTTTGGATTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATGAGTACCATGACTTTAGGATTTAGTGTTTATGTTTGGATTAA  739

seq1  AGAGACAGGAAATAATAAGATTCAACAAATCTCCAGAGAAAAACCTAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGAAATAATAAGATTCAACAAATCTCCAGAGAAAAACCTAAGC  789

seq1  TGCAAACAGATTTTGCTTTTTTCTATGTTAATGCAAATTTCTCCTATATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACAGATTTTGCTTTTTTCTATGTTAATGCAAATTTCTCCTATATG  839

seq1  ATTTCTATTGATATACTCTGTTTGGGTTAATTCTGATTTCTATTTGAGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATTGATATACTCTGTTTGGGTTAATTCTGATTTCTATTTGAGTA  889

seq1  TACTCTCCTTGGGTTAATCTGACCTACTTACTTATCAGGCATTTCTGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCCTTGGGTTAATCTGACCTACTTACTTATCAGGCATTTCTGACA  939

seq1  TGTATTCATAAAGAAGTTATACTATTTGCCATAGAAAATTAGAGAATTC  996
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATAAAGAAGTTATACTATTTGCCATAGAAAATTAGAGAATTC  988