BAC Information

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BAC

Clone NameB6Ng01-131O08
Chromosome3 (Build37)
Map Location 59,111,578 - 59,284,942
singlet/doubletdoublet
Overlap geneIgsf10, EG666751, EG666756
Upstream geneTsc22d2, D3Ucla1, Eif2a, 2810407C02Rik, 4932431H17Rik, LOC666680, LOC100040251, Siah2, LOC100040293, Clrn1, LOC100040416, Gpr171, P2ry14, Gpr87, P2ry13, P2ry12
Downstream geneEG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823, LOC100040485
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131O08.bB6Ng01-131O08.g
ACCDH932838DH932839
length9241,086
definitionDH932838|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O08, 5' end.DH932839|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,111,578 - 59,112,498)(59,283,859 - 59,284,942)
sequence
gaattctgttactaaactgtatttataggtctggggaatttttttcattg
tagtttaaaacagtgacagagttatacagtcatttacccacaagcattag
agcatagctcatcaaagggagcttgacatttttatactcagattatagtt
ctgtgaatacttaactgagttattgtgtagaaagaacatgcaatttaata
ctgatttctaaggcaattctgttgattattagactgtgtttcacccaccg
gcttaccatactaccaacccaaggactgaggaagtaattcagaacttgga
agataactttttttttctcattatgctcatgagaaagtaatttgatggaa
ataaatgcctttattatttattaataagaattttaataatctgtaatgag
ccttttattttattttattctgcttggcagaaggattccaattctcactg
agaaacacagcattgtttcaatagagaacaatctttcataaagaatccaa
gcaggagttatagcttagggaccagctggtatgtgtctgtgagcctcaga
atgggctgggaaatttacaacattttacatctaagtggtcagttttagaa
ttagaaattataggagtggtcaatactatcaagatatttcatcattataa
ttctttttaggtttactttagtacatctgtatgctatctatctataaatc
tatattctctatttatctatctatctatctatctatctatctatctatct
atctatctatctatctatctatctgtctgtctgtctgtctgtcttagtga
gggtttctattcctgcacaaacatcatgaccaagaaagcaagttggggga
ggaagggtttattccacttactcttccatactgctgtttttcacaaggaa
gtcaggacttggaacttcaaactg
gaattcatgaaattcttgggcaaatggatgtatctggaggatatcatcct
ccctcactgttttctgaaggtccaaagccctggatgctcctgagcttcac
tgtcattctgaatccttgtttttcactctttaagagtgtgaagcctgcaa
agagagcaatccattctcccactctgaactatttgtagagagcataagga
ttcaaagaaatctataaataatagatttggaaaaaaaaatatctgccagg
agaaaacagattaaactaaggaaacttcaaaatctttgacattcaaatta
aaagggctattaacagatttccagaacttaagagccaagttccaagaaca
gtcaagaatggcttttccaagcttgtaggttgtcagtagaggaattccat
tacagcacaagtaattcccccacagttcctgatcaccacacagcaaggag
tccttgctgctcttgttttgtgaatgaataattaaatgaaattcttccac
atctatggaaagcatttcttgatattttagtgagacttttcagtgaggtt
agccaaataaatcaattcaaaggacttattctgtctttaatatccaaatc
cctatctctgccatgaccctagttttaacagcaattcacatatctgatgc
aggcctccttctatggtaaataggtttattggcgacctgctggatataca
aagctaagggcctgcatctggtaatgacctcctggttatcagagtccagg
cagtcatcacacaacaagagagaaggaagatatggttattttatgtgtgt
ctgtctagctagactctccctctcatgtaaggacaccaagattcagtcat
gggagctccattttagtgagacattcttttctgaatcctttccaaagttc
acatgtcccgatgttcatagtcaaaaatatttccaaatctaaggattccc
tatgtgtcattaaattttgacatgcatgtaatgaaaccacactccaataa
tagccctccaaagttatttacagaaattattccacaacagggaagaacag
tttaaaatattaagggcagaagaaaaaggcagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_59111578_59112498
seq2: B6Ng01-131O08.b_45_968

seq1  GAATTCTGTTACTAAACTGTATTTATAGGTCTGGGGAATTTTTTTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTACTAAACTGTATTTATAGGTCTGGGGAATTTTTTTCATTG  50

seq1  TAGTTTAAAACAGTGACAGAGTTATACAGTCATTTACCCACAAGCATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAAACAGTGACAGAGTTATACAGTCATTTACCCACAAGCATTAG  100

seq1  AGCATAGCTCATCAAAGGGAGCTTGACATTTTTATACTCAGATTATAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGCTCATCAAAGGGAGCTTGACATTTTTATACTCAGATTATAGTT  150

seq1  CTGTGAATACTTAACTGAGTTATTGTGTAGAAAGAACATGCAATTTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATACTTAACTGAGTTATTGTGTAGAAAGAACATGCAATTTAATA  200

seq1  CTGATTTCTAAGGCAATTCTGTTGATTATTAGACTGTGTTTCACCCACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCTAAGGCAATTCTGTTGATTATTAGACTGTGTTTCACCCACCG  250

seq1  GCTTACCATACTACCAACCCAAGGACTGAGGAAGTAATTCAGAACTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCATACTACCAACCCAAGGACTGAGGAAGTAATTCAGAACTTGGA  300

seq1  AGATAACTTTTTTTTTCTCATTATGCTCATGAGAAAGTAATTTGATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTTTTTTTTTCTCATTATGCTCATGAGAAAGTAATTTGATGGAA  350

seq1  ATAAATGCCTTTATTATTTATTAATAAGAATTTTAATAATCTGTAATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCCTTTATTATTTATTAATAAGAATTTTAATAATCTGTAATGAG  400

seq1  CCTTTTATTTTATTTTATTCTGCTTGGCAGAAGGATTCCAATTCTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATTTTATTTTATTCTGCTTGGCAGAAGGATTCCAATTCTCACTG  450

seq1  AGAAACACAGCATTGTTTCAATAGAGAACAATCTTTCATAAAGAATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACAGCATTGTTTCAATAGAGAACAATCTTTCATAAAGAATCCAA  500

seq1  GCAGGAGTTATAGCTTAGGGACCAGCTGGTATGTGTCTGTGAGCCTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTTATAGCTTAGGGACCAGCTGGTATGTGTCTGTGAGCCTCAGA  550

seq1  ATGGGCTGGGAAATTTACAACA-TTTACATCTAAGTGGTCAGTTTTAGAA  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGGGCTGGGAAATTTACAACATTTTACATCTAAGTGGTCAGTTTTAGAA  600

seq1  TTAGAAATTATAGGAGTGGTCAATACTATCAAGATATTTCATCATTATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTATAGGAGTGGTCAATACTATCAAGATATTTCATCATTATAA  650

seq1  TTCTTTTTAGGTTTACTTTAGTACATCTGTATGCTATCTATCTATAAATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGGTTTACTTTAGTACATCTGTATGCTATCTATCTATAAATC  700

seq1  TATATTCTCTATTTATCTATCTATCTATCTATCTATCTATCTATCTATCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTCTATTTATCTATCTATCTATCTATCTATCTATCTATCTATCT  750

seq1  ATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTTAGTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTTAGTGA  800

seq1  GGGTTTCTATTCCTGCACAAACATCATGACCAAG-AAGCAAGTTGGGGAG  848
      |||||||||||||||||||||||||||||||||| |||||||||||||  
seq2  GGGTTTCTATTCCTGCACAAACATCATGACCAAGAAAGCAAGTTGGGGGA  850

seq1  GAAAGGGTTTATTCCACTTACTCTTCCATACTGCTGTTTATCACCAAGGA  898
      | ||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GGAAGGGTTTATTCCACTTACTCTTCCATACTGCTGTTTTTCA-CAAGGA  899

seq1  AGTCAGGAC-TGGAAC-TCAAACAG  921
      ||||||||| |||||| |||||| |
seq2  AGTCAGGACTTGGAACTTCAAACTG  924

seq1: chr3_59283859_59284942
seq2: B6Ng01-131O08.g_70_1155 (reverse)

seq1  GAAGCTTGCCTTGTCTTCTGCCTTTAATATTTTAAACTGTTC-TCCCTGT  49
      ||||||  | || ||||||||| ||||||||||||||||||| |||||||
seq2  GAAGCTGCCTTTTTCTTCTGCCCTTAATATTTTAAACTGTTCTTCCCTGT  50

seq1  T-TGTGATAATTTCTTGTAAAATACTTTTGGAGGGCTATTATTGGAGTGT  98
      | ||  |||||||| ||| |||||  ||||||||||||||||||||||||
seq2  TGTGGAATAATTTC-TGT-AAATAACTTTGGAGGGCTATTATTGGAGTGT  98

seq1  GGTTTCATTACATGCATGTCAAAATTTAATGACACATAGGGAATCCTTTA  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTTTCATTACATGCATGTCAAAATTTAATGACACATAGGGAATCC-TTA  147

seq1  GATTTGGAAATATTTTTTGACTATGAACATC-GGACATGTGGACTTTGGA  197
      |||||||||||| |||||||||||||||||| ||||||||| ||||||||
seq2  GATTTGGAAATA-TTTTTGACTATGAACATCGGGACATGTGAACTTTGGA  196

seq1  AAGGATTCAG-AAAGAATGTCTCACTAAAATGGAGCT-CCATGACTGAAT  245
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  AAGGATTCAGAAAAGAATGTCTCACTAAAATGGAGCTCCCATGACTGAAT  246

seq1  CTTGGTGTCCTTACATGAGAGGGAGAGTCTAGCTAGACAGACACACAT-A  294
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTGGTGTCCTTACATGAGAGGGAGAGTCTAGCTAGACAGACACACATAA  296

seq1  AATAACCATATCTTCCTTCTCTCTTGTTGTGTGATGACTGCCTGGACTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCATATCTTCCTTCTCTCTTGTTGTGTGATGACTGCCTGGACTCT  346

seq1  GATAACCAGGAGGTCATTACCAGATGCAGGCCCTTAGCTTTGTATATCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCAGGAGGTCATTACCAGATGCAGGCCCTTAGCTTTGTATATCCA  396

seq1  GCAGGTCGCCAATAAACCTATTTACCATAGAAGGAGGCCTGCATCAGATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCGCCAATAAACCTATTTACCATAGAAGGAGGCCTGCATCAGATA  446

seq1  TGTGAATTGCTGTTAAAACTAGGGTCATGGCAGAGATAGGGATTTGGATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTGCTGTTAAAACTAGGGTCATGGCAGAGATAGGGATTTGGATA  496

seq1  TTAAAGACAGAATAAGTCCTTTGAATTGATTTATTTGGCTAACCTCACTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGACAGAATAAGTCCTTTGAATTGATTTATTTGGCTAACCTCACTG  546

seq1  AAAAGTCTCACTAAAATATCAAGAAATGCTTTCCATAGATGTGGAAGAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTCACTAAAATATCAAGAAATGCTTTCCATAGATGTGGAAGAAT  596

seq1  TTCATTTAATTATTCATTCACAAAACAAGAGCAGCAAGGACTCCTTGCTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAATTATTCATTCACAAAACAAGAGCAGCAAGGACTCCTTGCTG  646

seq1  TGTGGTGATCAGGAACTGTGGGGGAATTACTTGTGCTGTAATGGAATTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGATCAGGAACTGTGGGGGAATTACTTGTGCTGTAATGGAATTCC  696

seq1  TCTACTGACAACCTACAAGCTTGGAAAAGCCATTCTTGACTGTTCTTGGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGACAACCTACAAGCTTGGAAAAGCCATTCTTGACTGTTCTTGGA  746

seq1  ACTTGGCTCTTAAGTTCTGGAAATCTGTTAATAGCCCTTTTAATTTGAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCTCTTAAGTTCTGGAAATCTGTTAATAGCCCTTTTAATTTGAAT  796

seq1  GTCAAAGATTTTGAAGTTTCCTTAGTTTAATCTGTTTTCTCCTGGCAGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGATTTTGAAGTTTCCTTAGTTTAATCTGTTTTCTCCTGGCAGAT  846

seq1  ATTTTTTTTTCCAAATCTATTATTTATAGATTTCTTTGAATCCTTATGCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTCCAAATCTATTATTTATAGATTTCTTTGAATCCTTATGCT  896

seq1  CTCTACAAATAGTTCAGAGTGGGAGAATGGATTGCTCTCTTTGCAGGCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAATAGTTCAGAGTGGGAGAATGGATTGCTCTCTTTGCAGGCTT  946

seq1  CACACTCTTAAAGAGTGAAAAACAAGGATTCAGAATGACAGTGAAGCTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTTAAAGAGTGAAAAACAAGGATTCAGAATGACAGTGAAGCTCA  996

seq1  GGAGCATCCAGGGCTTTGGACCTTCAGAAAACAGTGAGGGAGGATGATAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATCCAGGGCTTTGGACCTTCAGAAAACAGTGAGGGAGGATGATAT  1046

seq1  CCTCCAGATACATCCATTTGCCCAAGAATTTCATGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGATACATCCATTTGCCCAAGAATTTCATGAATTC  1086