BAC Information

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BAC

Clone NameB6Ng01-132A09
Chromosome3 (Build37)
Map Location 56,278,148 - 56,437,144
singlet/doubletdoublet
Overlap genenone
Upstream geneDclk1, Mab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132A09.bB6Ng01-132A09.g
ACCDH932936DH932937
length96971
definitionDH932936|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A09, 5' end.DH932937|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,437,049 - 56,437,144)(56,278,148 - 56,279,121)
sequence
gaattccatctgttcttgtctttaactgaaatcatggtggtgcatgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgggtgtgtg
gaattctttggcaatagaatctaaatttcaacagaagtttgggtgagaac
attcaggccacagcactatggcagacgtattttgatgatacagttctggg
tgatagaatggctcatggtaatcactactgagagagagtatcctgactgt
ctccccttcactgtcagaagtctacagagcttgactgtgcatcttgcggt
cacttgaacccatattctttctcaggggtcactttggactccaaagacag
aagctgaatgatgtttgacagagaaatctcgaaagagtttttttattcaa
aagatattgattttgtttgctgcacattcagaaggctagagcttagtagg
agacatgaataccttaggaatgtgaagatgtgccatgtagagagatgttt
gagggaagtggaaagtctttctcccagagcagttgtggagtctatttcat
taacatttcagaatgcaacttgattcttagttttgaacacatcccttgtg
atggcttattttggttgtcatcttgactcacttggaaagagggaccctca
gtttgaaaggatcctccaccgtgtatacacaccgacacagacagacagac
agacagacatgtcacctccatcatattggcctgtaagtcagtttttggat
tgctaattggtatacaggcacacagtccactgtgggcagtgccatcccta
ggctggactgcataagcaaaggtatctgagtgagcctggctaaggaaagc
cataagcagtgttcattcatggtttctgcttcagtttttgtctccaagtc
cctgctctgagttcctttcttgtcttccctggatgatggactatggcaaa
taaacctttcctcttctgaattgttttggtgaaagtgagaaacaaatgac
atcatctataaaacatacattacctatacaaccacagtgaaataagggga
ggtgatttgggggtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56437049_56437144
seq2: B6Ng01-132A09.b_46_141 (reverse)

seq1  CACACACCCACCCACACACACACACACACACACACACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCCACCCACACACACACACACACACACACACACACACACACACA  50

seq1  CATGCACCACCATGATTTCAGTTAAAGACAAGAACAGATGGAATTC  96
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCACCATGATTTCAGTTAAAGACAAGAACAGATGGAATTC  96

seq1: chr3_56278148_56279121
seq2: B6Ng01-132A09.g_67_1037

seq1  GAATTCTTTGGCAATAGAATCTAAATTTCAACAGAAGTTTGGGTGAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCAATAGAATCTAAATTTCAACAGAAGTTTGGGTGAGAAC  50

seq1  ATTCAGGCCACAGCACTATGGCAGACGTATTTTGATGATACAGTTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGCCACAGCACTATGGCAGACGTATTTTGATGATACAGTTCTGGG  100

seq1  TGATAGAATGGCTCATGGTAATCACTACTGAGAGAGAGTATCCTGACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAATGGCTCATGGTAATCACTACTGAGAGAGAGTATCCTGACTGT  150

seq1  CTCCCCTTCACTGTCAGAAGTCTACAGAGCTTGACTGTGCATCTTGCGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTCACTGTCAGAAGTCTACAGAGCTTGACTGTGCATCTTGCGGT  200

seq1  CACTTGAACCCATATTCTTTCTCAGGGGTCACTTTGGACTCCAAAGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAACCCATATTCTTTCTCAGGGGTCACTTTGGACTCCAAAGACAG  250

seq1  AAGCTGAATGATGTTTGACAGAGAAATCTCGAAAGAGTTTTTTTATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAATGATGTTTGACAGAGAAATCTCGAAAGAGTTTTTTTATTCAA  300

seq1  AAGATATTGATTTTGTTTGCTGCACATTCAGAAGGCTAGAGCTTAGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTGATTTTGTTTGCTGCACATTCAGAAGGCTAGAGCTTAGTAGG  350

seq1  AGACATGAATACCTTAGGAATGTGAAGATGTGCCATGTAGAGAGATGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAATACCTTAGGAATGTGAAGATGTGCCATGTAGAGAGATGTTT  400

seq1  GAGGGAAGTGGAAAGTCTTTCTCCCAGAGCAGTTGTGGAGTCTATTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGTGGAAAGTCTTTCTCCCAGAGCAGTTGTGGAGTCTATTTCAT  450

seq1  TAACATTTCAGAATGCAACTTGATTCTTAGTTTTGAACACATCCCTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTCAGAATGCAACTTGATTCTTAGTTTTGAACACATCCCTTGTG  500

seq1  ATGGCTTATTTTGGTTGTCATCTTGACTCACTTGGAAAGAGGGACCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTATTTTGGTTGTCATCTTGACTCACTTGGAAAGAGGGACCCTCA  550

seq1  GTTTGAAAGGATCCTCCACCGTGTATACACACCGACACAGACAGACAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGGATCCTCCACCGTGTATACACACCGACACAGACAGACAGAC  600

seq1  AGACAGACATGTCACCTCCATCATATTGGCCTGTAAGTCAGTTTTTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACATGTCACCTCCATCATATTGGCCTGTAAGTCAGTTTTTGGAT  650

seq1  TGCTAATTGGTATACAGGCACACAGTCCACTGTGGGCAGTGCCATCCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATTGGTATACAGGCACACAGTCCACTGTGGGCAGTGCCATCCCTA  700

seq1  GGCTGGACTGCATAAGCAAAGGTATCTGAGTGAGCCTGGCTAAGGAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGACTGCATAAGCAAAGGTATCTGAGTGAGCCTGGCTAAGGAAAGC  750

seq1  CATAAGCAGTGTTCATTCATGGTTTCTGCTTCAGTTTTTGTCTCCAAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCAGTGTTCATTCATGGTTTCTGCTTCAGTTTTTGTCTCCAAGTC  800

seq1  CCTGCTCTGAGTTCCTTTCTTGTCTTCCCTGGATGATGGACTATGGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTGAGTTCCTTTCTTGTCTTCCCTGGATGATGGACTATGGCAAA  850

seq1  TAAACCTTTCCTCTTCTGAATTGTTTTTGGTGAAAGTGAGAAAACAAATG  900
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TAAACCTTTCCTCTTCTGAATTG-TTTTGGTGAAAGTGAG-AAACAAATG  898

seq1  ACATCATCTATAAAACATACATTACCTATAACAACCACAGTGGAAATAAG  950
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  ACATCATCTATAAAACATACATTACCTAT-ACAACCACAGT-GAAATAAG  946

seq1  GGGAGGTGATTT-GGGGTGGGGTGG  974
      |||||||||||| ||||||||||||
seq2  GGGAGGTGATTTGGGGGTGGGGTGG  971