BAC Information

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BAC

Clone NameB6Ng01-132C10
Chromosome3 (Build37)
Map Location 75,619,930 - 75,762,704
singlet/doubletdoublet
Overlap geneGolph4
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1
Downstream geneFstl5, LOC100041625
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C10.bB6Ng01-132C10.g
ACCDH933028DH933029
length1,0321,127
definitionDH933028|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C10, 5' end.DH933029|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,619,930 - 75,620,946)(75,761,543 - 75,762,704)
sequence
gaattccaggttttgctgaattaaatagataaacatcccttcttataaag
aaataaagaacaacaggccgtacatgccattaagactgccctaatgtcgt
ccccagctttgggactcctagatgtgactgagaacaaaggtattgccaaa
gaggttcttactcatagattgggaccctggaaaagacctgtggcatactt
gtaagaaattagacctggtggctgtaggatggcctgcttgtctgcacata
gtggcttctggtcaaggacacagataaattgactctgagacaaaacttgg
cacatgccttacacatgaaagtgtggttcagcccctcagaccaatggctg
actaactctcacatgactcattaccagactctgttgttcaattctgatag
agtcacttttgcccccctggtcctagacccagacttttagcaggttcttg
ctgagacacataggtgacatggagatctgacggaccagttactggagggt
gcagatgttacctgtatcaataccaacctatagttaagatagaaaaagag
tatgatttctattctccacatagagatatagacttctgaaattctaagat
tagaattacttactagaagaagaggggaatgaaagaaagatgaaatttca
aacctgaaagtcatataaagtactcagaaattgctggttgtttgtgagcc
tagaggctgcctggggctgagaaaagagaaaaacaaacctgggtatgcct
cgtagttaaaacattcctggggacatcttgaccataagataaaggggaat
gtgaagacataactaaactgagtcaacaattcacagaactctgacaccct
gcacgtacatgtaatttttctgctgatgtttgaataagccaatagtgtgt
tgctatgctgaattccacacccctaagtcccttaccccataaaaccccta
gcttttgagcctcgtggccgacatccgtatctcctgtgtgggatgcatgt
tggtccggagctatgtaattaaacgacctcat
gaattctaaagaaatcccactaatgtctcccaattgctatgagtaaaacg
gaaagaggaaaccttaaatgatggtaaatcccacaagactggagactatg
ggagctacaccatcaccaggaagcagacttgagctgctttagaccatttt
ccctttaaattaagcattctttcttttctccgagactgaggattgaactc
agtgtctacagtgttctaggtaaatgttgcaacagtaaggcatcatccct
agccctcgtttgacttttgatttgagacaaggtctctctcaattgcccat
tctgatcctggaatcctgttgcctcgatctccccggtatctctgattaca
ggttgtcctaccaggtctggcatagtttcacacttaggttacatgtttaa
acggagtcatgatttgttttctacagaaggaaaaggtagaaaggataaga
ttctgataaaattctcctttagtgaggaagtatctttttacaagacctag
aagagactacaagtattatggtcatattggccaaatttagattctttgtt
tccaactcgtaaatcgaatgtcctggctaagattcagtgtaagagcattt
ggaaccaacataatgtgatttttattagctaagtgcatataccaccagtc
tcacttattttttacagtgagagaaatgccctggtctgcctgtgtggctc
ttgttaacctatgatttcaggactgacctaaaaacattcaacacaggaac
tgtcttgaaaatgaatctggtttaagcagatctccttcgtttaaagcact
cattccccataattaattgtgatgactaaaacacgggcaggatatcacaa
aaaaatatgtagaatgcaatatgcagaatgtaaagtgccactgcacaact
gatacttttcagaaaaatttatttctcttagaattcagtcagaggagaaa
caaatttatcatttatgcataacctcattccacacacaccctgattatat
gagaaagaatgccctgtggattcttgagtggttgcgttattatgctgtct
aacttttgtaaacgaatgggtttgctgctgaaattattaatgtaactgat
tttttcgctacattaagaattacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75619930_75620946
seq2: B6Ng01-132C10.b_46_1060

seq1  GAATTCCAGGTTTTGCTGAATTAAATAGATAAACATCCCTTCTTATAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTTTGCTGAATTAAATAGATAAACATCCCTTCTTATAAAG  50

seq1  AAATAAAGAACAACAGGCCGTACATGCCATTAAGACTGCCCTAATGTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAACAACAGGCCGTACATGCCATTAAGACTGCCCTAATGTCGT  100

seq1  CCCCAGCTTTGGGACTCCTAGATGTGACTGAGAACAAAGGTATTGCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCTTTGGGACTCCTAGATGTGACTGAGAACAAAGGTATTGCCAAA  150

seq1  GAGGTTCTTACTCATAGATTGGGACCCTGGAAAAGACCTGTGGCATACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCTTACTCATAGATTGGGACCCTGGAAAAGACCTGTGGCATACTT  200

seq1  GTAAGAAATTAGACCTGGTGGCTGTAGGATGGCCTGCTTGTCTGCACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAATTAGACCTGGTGGCTGTAGGATGGCCTGCTTGTCTGCACATA  250

seq1  GTGGCTTCTGGTCAAGGACACAGATAAATTGACTCTGAGACAAAACTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTCTGGTCAAGGACACAGATAAATTGACTCTGAGACAAAACTTGG  300

seq1  CACATGCCTTACACATGAAAGTGTGGTTCAGCCCCTCAGACCAATGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCCTTACACATGAAAGTGTGGTTCAGCCCCTCAGACCAATGGCTG  350

seq1  ACTAACTCTCACATGACTCATTACCAGACTCTGTTGTTCAATTCTGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTCTCACATGACTCATTACCAGACTCTGTTGTTCAATTCTGATAG  400

seq1  AGTCACTTTTGCCCCCCTGGTCCTAGACCCAGACTTTTAGCAGGTTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTTGCCCCCCTGGTCCTAGACCCAGACTTTTAGCAGGTTCTTG  450

seq1  CTGAGACACATAGGTGACATGGAGATCTGACGGACCAGTTACTGGAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACACATAGGTGACATGGAGATCTGACGGACCAGTTACTGGAGGGT  500

seq1  GCAGATGTTACCTGTATCAATACCAACCTATAGTTAAGATAGAAAAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGTTACCTGTATCAATACCAACCTATAGTTAAGATAGAAAAAGAG  550

seq1  TATGATTTCTATTCTCCACATAGAGATATAGACTTCTGAAATTCTAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTCTATTCTCCACATAGAGATATAGACTTCTGAAATTCTAAGAT  600

seq1  TAGAATTACTTACTAGAAGAAGAGGGGAATGAAAGAAAGATGAAATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTACTTACTAGAAGAAGAGGGGAATGAAAGAAAGATGAAATTTCA  650

seq1  AACCTGAAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAAAGTCATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGCC  700

seq1  TAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAACCTGGGTATGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCTGCCTGGGGCTGAGAAAAGAGAAAAACAAACCTGGGTATGCCT  750

seq1  CGTAGTTAAAACATTCCTGGGGACATCTTGACCATAAGATAAAGGGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTTAAAACATTCCTGGGGACATCTTGACCATAAGATAAAGGGGAAT  800

seq1  GTGAAGACATAACTAAACTGAGTCAACAATTCACAGAACTCTGACACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGACATAACTAAACTGAGTCAACAATTCACAGAACTCTGACACCCT  850

seq1  GCACGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGT  900

seq1  TGCTATGCTGAATTCCACACCCCTAAGTCCCTTACCCCATAAAAACCCCT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCTATGCTGAATTCCACACCCCTAAGTCCCTTACCCCAT-AAAACCCCT  949

seq1  AGCTTTTGAGCCTCGTGGCCGACATCCGTTATCTCCTGTGTGGGATGCAT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCTTTTGAGCCTCGTGGCCGACATCCG-TATCTCCTGTGTGGGATGCAT  998

seq1  GTTGGTCCGGAGCTATG  1017
      |||||||||||||||||
seq2  GTTGGTCCGGAGCTATG  1015

seq1: chr3_75761543_75762704
seq2: B6Ng01-132C10.g_67_1193 (reverse)

seq1  GTGTGTATTTCTCTTAATGGTAGCAGAAAAAAAAATCAGTTACATTTTTA  50
      ||||||| |  ||||||| |||||     |||||||||||||||||  ||
seq2  GTGTGTAAT--TCTTAAT-GTAGC----GAAAAAATCAGTTACATTAATA  43

seq1  AATTACATTTTCAAGGCCAGCAAAACCCACTACGTTTAACAAAAAGTTAG  100
      |       |||||    |||| ||||||| | ||||||   |||||||||
seq2  A-------TTTCA---GCAGC-AAACCCA-TTCGTTTA--CAAAAGTTAG  79

seq1  ACAGGCATAATAACGCCAAACCACTTCAAAGAAATCCACAGTGCATTTCT  150
      ||| ||||||||||||  |||||| ||||   ||||||||| ||| ||||
seq2  ACA-GCATAATAACGC--AACCAC-TCAA--GAATCCACAGGGCA-TTCT  122

seq1  TTCTTCAATATAATCAGGGTGTGTGTGGAATTGAGGTTATGCATAAATGA  200
      ||||   ||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCT--CATATAATCAGGGTGTGTGTGGAA-TGAGGTTATGCATAAATGA  169

seq1  TAAATTTGTTTCTCCTCTTGACCTGAATTCTAAGAGAAATAAATTATTTC  250
      ||||||||||||||||| ||| ||||||||||||||||||||||| ||||
seq2  TAAATTTGTTTCTCCTC-TGA-CTGAATTCTAAGAGAAATAAATT-TTTC  216

seq1  TGAAAAGTATCAGTTGTGCAGTGGCACTTTTACATTCTGCATATTGCATT  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAAAAGTATCAGTTGTGCAGTGGCAC-TTTACATTCTGCATATTGCATT  265

seq1  CTACATATTTTTTTGTGATATCCTGCCCGTGTTTTAGTCATCACAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATTTTTTTGTGATATCCTGCCCGTGTTTTAGTCATCACAATTAA  315

seq1  TTATGGGGAATGAGTGCTTTAAACGAAGGAGATCTGCTTAAACCAGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGGAATGAGTGCTTTAAACGAAGGAGATCTGCTTAAACCAGATTC  365

seq1  ATTTTCAAGACAGTTCCTGTGTTGAATGTTTTTAGGTCAGTCCTGAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAGACAGTTCCTGTGTTGAATGTTTTTAGGTCAGTCCTGAAATC  415

seq1  ATAGGTTAACAAGAGCCACACAGGCAGACCAGGGCATTTCTCTCACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTAACAAGAGCCACACAGGCAGACCAGGGCATTTCTCTCACTGTA  465

seq1  AAAAATAAGTGAGACTGGTGGTATATGCACTTAGCTAATAAAAATCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGTGAGACTGGTGGTATATGCACTTAGCTAATAAAAATCACAT  515

seq1  TATGTTGGTTCCAAATGCTCTTACACTGAATCTTAGCCAGGACATTCGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGGTTCCAAATGCTCTTACACTGAATCTTAGCCAGGACATTCGAT  565

seq1  TTACGAGTTGGAAACAAAGAATCTAAATTTGGCCAATATGACCATAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGTTGGAAACAAAGAATCTAAATTTGGCCAATATGACCATAATAC  615

seq1  TTGTAGTCTCTTCTAGGTCTTGTAAAAAGATACTTCCTCACTAAAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTCTCTTCTAGGTCTTGTAAAAAGATACTTCCTCACTAAAGGAGA  665

seq1  ATTTTATCAGAATCTTATCCTTTCTACCTTTTCCTTCTGTAGAAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCAGAATCTTATCCTTTCTACCTTTTCCTTCTGTAGAAAACAAA  715

seq1  TCATGACTCCGTTTAAACATGTAACCTAAGTGTGAAACTATGCCAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACTCCGTTTAAACATGTAACCTAAGTGTGAAACTATGCCAGACCT  765

seq1  GGTAGGACAACCTGTAATCAGAGATACCGGGGAGATCGAGGCAACAGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGACAACCTGTAATCAGAGATACCGGGGAGATCGAGGCAACAGGAT  815

seq1  TCCAGGATCAGAATGGGCAATTGAGAGAGACCTTGTCTCAAATCAAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGATCAGAATGGGCAATTGAGAGAGACCTTGTCTCAAATCAAAAGT  865

seq1  CAAACGAGGGCTAGGGATGATGCCTTACTGTTGCAACATTTACCTAGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGAGGGCTAGGGATGATGCCTTACTGTTGCAACATTTACCTAGAAC  915

seq1  ACTGTAGACACTGAGTTCAATCCTCAGTCTCGGAGAAAAGAAAGAATGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGACACTGAGTTCAATCCTCAGTCTCGGAGAAAAGAAAGAATGCT  965

seq1  TAATTTAAAGGGAAAATGGTCTAAAGCAGCTCAAGTCTGCTTCCTGGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAAGGGAAAATGGTCTAAAGCAGCTCAAGTCTGCTTCCTGGTGA  1015

seq1  TGGTGTAGCTCCCATAGTCTCCAGTCTTGTGGGATTTACCATCATTTAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAGCTCCCATAGTCTCCAGTCTTGTGGGATTTACCATCATTTAAG  1065

seq1  GTTTCCTCTTTCCGTTTTACTCATAGCAATTGGGAGACATTAGTGGGATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTCTTTCCGTTTTACTCATAGCAATTGGGAGACATTAGTGGGATT  1115

seq1  TCTTTAGAATTC  1162
      ||||||||||||
seq2  TCTTTAGAATTC  1127