BAC Information

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BAC

Clone NameB6Ng01-132C18
Chromosome3 (Build37)
Map Location 41,059,202 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C18.bB6Ng01-132C18.g
ACCDH933044DH933045
length959974
definitionDH933044|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C18, 5' end.DH933045|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttaatagggacggggtttcgttttctcgctctcttgcttct
tacactctggctcctgaagatgtaagcaataaagctttgccgcagaagat
tctggtctgttgcgtctttcctggccggtcgtgagaacgcgtctaataac
aatatacatttatataacatatattagcatatagaatatatatatataca
cacacacacacacacatatatgtgtgtgtatatatgtgtgtgtgtattga
cccatccagcaggtccagttattggagggtctcgaggggaccttctccta
agaaccaaatggggggaggggtagagagagacaagaaccttgtgtaatga
aggacacagggaagcagtctgagtaacatcaaggtctcgctttattgaga
aaggcccaaggcttaaatgcacaagcaaaaggggaagtacttttcagcag
gaggagtgggacagtagaaatgcacaagcaaaagtgaaagtacaagtact
tctcagtgggaggggtggggcagtagaaatttttctttaggcagttacaa
ggggaagcaggaacttggtgatatcagggtgtggtcagggcatctggtgc
tgacttagggctggaacattctgtggttattcttggaaatgtgtgtcggt
ggcccgcttttgaccccccttttcttctcgggggggaggcccaattcaga
gatcaggacaatagcgctgtcttaatagctcccaacatctcccccccgtt
ttaatattttttataaaggcatatttgaataataaatttgtagctacgtt
tttaacgactgcctaaacatctgtttgctcaccgggtgatctctaaaacc
acaaaggacacaggagaagtcatctatgagcctgaattaagggttccagt
ctgttgggtttaacctggggtagccaagggattttaggaatgaagcaagc
tctgtgggt
gaattctttgtttagctctgagccccattttttaatggggctatttaatt
ttctggagtccaccttcttgagttctttatatatattagatattattccc
ctatcggatttaggataggtaaagatcatttcccaatctgttggtgtcct
tattgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatattttagaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagaatggatcaattcgc
gttcttctacatgttaacaaccagttgtgccagcacaatttgttgaaaat
gctgtttttcttccacttgatggttttagctcccttgtcgaagaccaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactctaccagtaccatgcagtttttctcataattgc
tctgcagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgaggagagtttttgctatcctaggattttttttattccagatg
aatttgcagattgctctttctaattcgttgaaggattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatgctgccaatccatgagcatgggagatctttccatctt
ctgagatattttttatttctttcttaggagacttgaagttcttatcatac
agatctttcatttccttagttagagtcacgccagatattttatatttttt
gtgactattgagaaggtgttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059202_41059737
seq2: B6Ng01-132C18.g_67_603 (reverse)

seq1  AATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTCG  50
      |||||||||| |||||| ||| ||||||||||||||||||||| ||||||
seq2  AATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGGTCTTCG  50

seq1  ACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAA  100
      |||||||||||||||||||| ||||||| ||| |||||||||||||||||
seq2  ACAAGGGAGCTAAAACCATCAAGTGGAAGAAAAACAGCATTTTCAACAAA  100

seq1  TGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCC  150
      | |||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TTGTGCTGGCACAACTGGTTGTTAACATGTAGAAGAACGCGAATTGATCC  150

seq1  ACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCC  200
      | || ||||||||||||||||||||||||||||||||||||||||||  |
seq2  ATTCTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTC  200

seq1  ACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGC  250

seq1  CTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGC  300
      ||  || |||||| ||||||||||||||||||| ||||||||||||||||
seq2  CTCTAAAATATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGC  300

seq1  TTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAA  350
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATGAAACTGCAAA  350

seq1  GCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAACA  399
      ||||||| |||||||||||||| ||||||||||||| |||| ||||||||
seq2  GCTTCTGTAAGGCAAAAGACACTGTCAATAAGACAATAAGGACACCAACA  400

seq1  GATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATC  449
      |||||||||| ||||||||||||||||||||| ||||||||| |||||||
seq2  GATTGGGAAATGATCTTTACCTATCCTAAATCCGATAGGGGAATAATATC  450

seq1  CAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACC  499
       ||||||||| ||||||||||||||||||| |||||||||| ||||| ||
seq2  TAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATTAAATAGCC  500

seq1  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  536
      |||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  537