BAC Information

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BAC

Clone NameB6Ng01-132N21
Chromosome3 (Build37)
Map Location 15,101,789 - 15,102,939
singlet/doubletsinglet
Overlap genenone
Upstream gene0710005M24Rik, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323
Downstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132N21.bB6Ng01-132N21.g
ACCDH933563DH933564
length1,1311,163
definitionDH933563|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N21, 5' end.DH933564|Mus musculus domesticus DNA, BAC clone: B6Ng01-132N21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcagagctagcaaaacaacagtgccattcaaattatcacagc
atttctgagccctgcaggaagtcttgaggagatgaatacagaaacttctt
ctttcctcttgacaataacagaggaagagcagggtgaagagcctcagacc
caacaacttcagccattagtcagtccttggattagtccccaaacttctta
agacctccacaggctgtttgaaaagtctgaacttccttttactctttata
gctatgaaattcattttcttgctggttttgaaattccttggtgtcttcca
tggtcatgaacccaacaagagtcataaaatagactcctggacagccaagg
tgtagtagggacaagtttccagcctagggccttaaacacagtaacagagc
aaagcagagccatattagaaactgggtaaattgttggcctctcaatgttt
gcttctgctgtctcttaaatccacaaactatcacatgacagtgtggccat
gtcctttctgatgtcataacgtcacagggataaaaaatatccactgcttc
tcacttcttaggtagtctgtgagaaactattctatttttaaactaaacta
tttctccagcataccaagaatcagcagcattactgtaaaggtcttgcctc
tagatcagtggttctaaactttgggaatgcatatcacatatcctacagtt
agaaagtcgatttaaaataatgttattgttggggtcactacaacatgaga
gactgtattaaggggttgcagcatcttgattacttagttttttatgacag
agagttagtatatatcccttacaacgttaagctatccatgcattggaaaa
ccaaagagaagtgacaacattccaaaaatcagtattcagagacactaaaa
tttgaatttcaaaaaagctttatgatttatatactcacataaaacataaa
gacgacagttaacttggagatggcagagagcatgggtttcccggtctaga
gtttattctatggatgataagggtaaggtttcccagtaggtactagactg
aactcatggatgcttaatatctgagcgtcttggtgagtgtagcttgcatg
ctctcagaactaaactgttctgtttctttac
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggcttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattctgttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttaatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcatgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgtcgtctactcctcttgggtgaatttgcttccttttttctagggc
ttttagatgtgttgtcaagctgctagttatgtgctgtcttcagtttcttc
ttggaggctcctcagagctatgagtttccttcttagaaatgctttcattg
tgtccaataggttgggtacgttggtggcttcaatttcataaatctaaaag
cttatatctctatccttctttgacaagtatatgagaagaggtggtcgtcc
ctgaagttgcattccatatatggtcatgagagacgctcaggccgtggtcc
gtaggacaatcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15101789_15102939
seq2: B6Ng01-132N21.b_48_1178

seq1  GAATTCCTTCAGAGCTAGCAAAACAACAGTGCCATTCAAATTATCACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAGAGCTAGCAAAACAACAGTGCCATTCAAATTATCACAGC  50

seq1  ATTTCTGAGCCCTGCAGGAAGTCTTGAGGAGATGAATACAGAAACTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGCCCTGCAGGAAGTCTTGAGGAGATGAATACAGAAACTTCTT  100

seq1  CTTTCCTCTTGACAATAACAGAGGAAGAGCAGGGTGAAGAGCCTCAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCTTGACAATAACAGAGGAAGAGCAGGGTGAAGAGCCTCAGACC  150

seq1  CAACAACTTCAGCCATTAGTCAGTCCTTGGATTAGTCCCCAAACTTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTTCAGCCATTAGTCAGTCCTTGGATTAGTCCCCAAACTTCTTA  200

seq1  AGACCTCCACAGGCTGTTTGAAAAGTCTGAACTTCCTTTTACTCTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCCACAGGCTGTTTGAAAAGTCTGAACTTCCTTTTACTCTTTATA  250

seq1  GCTATGAAATTCATTTTCTTGCTGGTTTTGAAATTCCTTGGTGTCTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAAATTCATTTTCTTGCTGGTTTTGAAATTCCTTGGTGTCTTCCA  300

seq1  TGGTCATGAACCCAACAAGAGTCATAAAATAGACTCCTGGACAGCCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGAACCCAACAAGAGTCATAAAATAGACTCCTGGACAGCCAAGG  350

seq1  TGTAGTAGGGACAAGTTTCCAGCCTAGGGCCTTAAACACAGTAACAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGGGACAAGTTTCCAGCCTAGGGCCTTAAACACAGTAACAGAGC  400

seq1  AAAGCAGAGCCATATTAGAAACTGGGTAAATTGTTGGCCTCTCAATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGCCATATTAGAAACTGGGTAAATTGTTGGCCTCTCAATGTTT  450

seq1  GCTTCTGCTGTCTCTTAAATCCACAAACTATCACATGACAGTGTGGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGCTGTCTCTTAAATCCACAAACTATCACATGACAGTGTGGCCAT  500

seq1  GTCCTTTCTGATGTCATAACGTCACAGGGATAAAAAATATCCACTGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTCTGATGTCATAACGTCACAGGGATAAAAAATATCCACTGCTTC  550

seq1  TCACTTCTTAGGTAGTCTGTGAGAAACTATTCTATTTTTAAACTAAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTTAGGTAGTCTGTGAGAAACTATTCTATTTTTAAACTAAACTA  600

seq1  TTTCTCCAGCATACCAAGAATCAGCAGCATTACTGTAAAGGTCTTGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAGCATACCAAGAATCAGCAGCATTACTGTAAAGGTCTTGCCTC  650

seq1  TAGATCAGTGGTTCTAAACTTTGGGAATGCATATCACATATCCTACAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGTGGTTCTAAACTTTGGGAATGCATATCACATATCCTACAGTT  700

seq1  AGAAAGTCGATTTAAAATAATGTTATTGTTGGGGTCACTACAACATGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCGATTTAAAATAATGTTATTGTTGGGGTCACTACAACATGAGA  750

seq1  GACTGTATTAAGGGGTTGCAGCATCTTGATTACTTAGTTTTTTATGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATTAAGGGGTTGCAGCATCTTGATTACTTAGTTTTTTATGACAG  800

seq1  AGAGTTAGTATATATCCCTTACAACGTTAAGCTATCCATGCATTGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAGTATATATCCCTTACAACGTTAAGCTATCCATGCATTGGAAAA  850

seq1  CCAAAGAGAAGTGACAACATTCCAAAAATCAGTATTCAGAGACACTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGAAGTGACAACATTCCAAAAATCAGTATTCAGAGACACTAAAA  900

seq1  TTTGAATTTCAAAAAAGCTTTTATGATTTATATACTCACATAAAACATAA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTGAATTTCAAAAAAGC-TTTATGATTTATATACTCACATAAAACATAA  949

seq1  AGACGACAGTTAACTTGGAGATGGCAGAAGAGCATGGGTTTCCCGGTCTA  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGACGACAGTTAACTTGGAGATGGCAG-AGAGCATGGGTTTCCCGGTCTA  998

seq1  GAGTTTATTCTATGGATGATAAGGGTAAAAGTTTTCCCAGTTAGGTTACC  1050
      ||||||||||||||||||||||||||  ||| |||||||| |||||   |
seq2  GAGTTTATTCTATGGATGATAAGGGT--AAGGTTTCCCAG-TAGGT--AC  1043

seq1  TAGAACTGAAACTCATGGATTGCTTTAATTATACCTGAGCGGTCTTGGTT  1100
      ||| |||| |||||||||| ||||    | ||| |||||| ||||||| |
seq2  TAG-ACTG-AACTCATGGA-TGCT----TAATATCTGAGC-GTCTTGG-T  1084

seq1  GAGTTTGTAAGCTTGCATGCTCTCAGTACTAAACTGTTTCTGTTTCTTTA  1150
      |||| |   ||||||||||||||||| ||||||||| |||||||||||||
seq2  GAGTGT---AGCTTGCATGCTCTCAGAACTAAACTG-TTCTGTTTCTTTA  1130

seq1  C  1151
      |
seq2  C  1131