BAC Information

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BAC

Clone NameB6Ng01-133B22
Chromosome3 (Build37)
Map Location 23,360,052 - 23,361,172
singlet/doubletsinglet
Overlap geneLOC100039548
Upstream geneLOC675593, LOC100040378, LOC623751
Downstream geneEG635702, EG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133B22.bB6Ng01-133B22.g
ACCDH933754DH933755
length1,0861,103
definitionDH933754|Mus musculus domesticus DNA, BAC clone: B6Ng01-133B22, 5' end.DH933755|Mus musculus domesticus DNA, BAC clone: B6Ng01-133B22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccttgatcttggtcaaggacgttctaggactgttggaac
actggcggaaggctttagccatgtcagaattcaatttttaaaagcactta
taataggaaaatactgaaagagagcacgtggatctatacactagactaac
gcggtaattgaacgcaggaatgaaaaattaatgtatgggtagagaacgct
agactccaggaggagagcttccttgaaactcttttgcctcatgagtactt
ttaagcctttcggcttgtccagttgactcgaccagagagcgtagcaggag
aagaatgctgaatgatccattcttatctccttgtacatagctcaagtcta
aatacatcaaagagctctacatgaaaccagagacactgaaacttatagag
gagaaatgggaagatcatcaaagatatggatacaggggaaagattcctga
acataatagcaatggcttttgaagtaagatcaggaaatgtcaaataggac
ctcataaaattgcaaagattctgtaagacaaaagacactgtcaataagac
caaaaagcaaccaacagattgggaaaagatgtttcccaatcccaaatcag
ataggggctaatatccaatatatataaaaaactcaagaagtcggactcca
gaaaaataaactaccctattaaaaaatgtgttggtgggattgcaagcttg
tacaacccctctggaaatcagtctggcagttccttagaatattggacata
gtactactggagtaaccggtaagaaggacacatgctccactttgttcata
gcagcttatttataatagccagaagctggaagaacccagatgccctccac
gaggatgattcgaatggtgtaatttaccatggagtatttctcacttctaa
aaagagtggttttgaaattctagcaatggaggactggaggcttactctga
gtgagttcccactcaaagaactcgccagattatctctctggatggatata
gcccgaacctttggataccagattagatacatttgctacgtgaatctaag
agtgagaccagtgaacctgcgccctcagtgggcaac
gaattccatatgggtcagcaagttaatatattaaaacctgaatttctggt
gtaatctgcaggagctgaacatggagacaaaaccacctgacaaacaggat
agctaagttatcagttctctgaaggatgtcttcagttatctacatgtacc
ttgaccctggttttgtagcctgattgactgtagtctagctagaggagggg
tgttgccataggatgcttactcatgaagactcttgtgattttcctcacga
aattggagcttagcccctggtcttgcacaaaatggaggtttgtttgtttt
ttgtttttctgtttttgtattattttcaaaaatggtgttggttgggcttc
acatttcatctttccttaggctacataggaggcctaataatggagcttcc
gatggaatcagaaggatcgttgcaagctgttcctctcacctccaggtatt
aattctataaattgagatctaaattccatgagcattgcccctattctttc
tttataaaccacattactctgtttaatatgtcaggaccatattactctgt
ttaatatgccgggaccaatcattaatagcaacagtagtatgaataaggtg
ataaacatggtagaaatcagggcagtcaaccagggggatctattaaaccc
tatgtttcaaaccatcctttggcagcatatctctttctgtcatgtatcta
cactttttcttactctggtcagtgtgtccctgatcagcaaggaaggattc
acataaaaacagcattttttcttttctttatctacagctgtttttaagtt
ggcacaactggaactctgtagagctagcacagatatgtcagtcccttctc
ctgccagatatagcctcatcatttttaaagtctgatataagccctttgtc
cttatcaaacagtactctttgtatctcctcatcagaatggtagatgattc
ttgtactagctgctccagggctggagagggcaggatggagagggggctca
tctcctagcatcagcattatgaaatccagacagtttcgctagccctgtcg
ttaagcagaactggagtcttgaaatcctagaaccccagttctgttgtcta
ggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23360052_23361172
seq2: B6Ng01-133B22.g_65_1167

seq1  GAATTCCATATGGGTCAGCAAGTTAATATATTAAAACCTGAATTTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGGGTCAGCAAGTTAATATATTAAAACCTGAATTTCTGGT  50

seq1  GTAATCTGCAGGAGCTGAACATGGAGACAAAACCACCTGACAAACAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTGCAGGAGCTGAACATGGAGACAAAACCACCTGACAAACAGGAT  100

seq1  AGCTAAGTTATCAGTTCTCTGAAGGATGTCTTCAGTTATCTACATGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTTATCAGTTCTCTGAAGGATGTCTTCAGTTATCTACATGTACC  150

seq1  TTGACCCTGGTTTTGTAGCCTGATTGACTGTAGTCTAGCTAGAGGAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCTGGTTTTGTAGCCTGATTGACTGTAGTCTAGCTAGAGGAGGGG  200

seq1  TGTTGCCATAGGATGCTTACTCATGAAGACTCTTGTGATTTTCCTCACGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCATAGGATGCTTACTCATGAAGACTCTTGTGATTTTCCTCACGA  250

seq1  AATTGGAGCTTAGCCCCTGGTCTTGCACAAAATGGAGGTTTGTTTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGCTTAGCCCCTGGTCTTGCACAAAATGGAGGTTTGTTTGTTTT  300

seq1  TTGTTTTTCTGTTTTTGTATTATTTTCAAAAATGGTGTTGGTTGGGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTCTGTTTTTGTATTATTTTCAAAAATGGTGTTGGTTGGGCTTC  350

seq1  ACATTTCATCTTTCCTTAGGCTACATAGGAGGCCTAATAATGGAGCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCATCTTTCCTTAGGCTACATAGGAGGCCTAATAATGGAGCTTCC  400

seq1  GATGGAATCAGAAGGATCGTTGCAAGCTGTTCCTCTCACCTCCAGGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAATCAGAAGGATCGTTGCAAGCTGTTCCTCTCACCTCCAGGTATT  450

seq1  AATTCTATAAATTGAGATCTAAATTCCATGAGCATTGCCCCTATTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATAAATTGAGATCTAAATTCCATGAGCATTGCCCCTATTCTTTC  500

seq1  TTTATAAACCACATTACTCTGTTTAATATGTCAGGACCATATTACTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAACCACATTACTCTGTTTAATATGTCAGGACCATATTACTCTGT  550

seq1  TTAATATGCCGGGACCAATCATTAATAGCAACAGTAGTATGAATAAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGCCGGGACCAATCATTAATAGCAACAGTAGTATGAATAAGGTG  600

seq1  ATAAACATGGTAGAAATCAGGGCAGTCAACCAGGGGGATCTATTAAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATGGTAGAAATCAGGGCAGTCAACCAGGGGGATCTATTAAACCC  650

seq1  TATGTTTCAAACCATCCTTTGGCAGCATATCTCTTTCTGTCATGTATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCAAACCATCCTTTGGCAGCATATCTCTTTCTGTCATGTATCTA  700

seq1  CACTTTTTCTTACTCTGGTCAGTGTGTCCCTGATCAGCAAGGAAGGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTCTTACTCTGGTCAGTGTGTCCCTGATCAGCAAGGAAGGATTC  750

seq1  ACATAAAAACAGCATTTTTTCTTTTCTTTATCTACAGCTGTTTTTAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAACAGCATTTTTTCTTTTCTTTATCTACAGCTGTTTTTAAGTT  800

seq1  GGCACAACTGGAACTCTGTAGAGCTAGCACAGATATGTCAGTCCCTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAACTGGAACTCTGTAGAGCTAGCACAGATATGTCAGTCCCTTCTC  850

seq1  CTGCCAGATATAGCCTCATCATTTTTAAAGTCTGATATAAGCCCTTTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGATATAGCCTCATCATTTTTAAAGTCTGATATAAGCCCTTTGTC  900

seq1  CTTATCAAACAGTACTCTTTGTTATCTCCTCATCAGAATGGTAGATGATT  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTATCAAACAGTACTCTTTG-TATCTCCTCATCAGAATGGTAGATGATT  949

seq1  CTTGGTACTAGCTGCTCCAGGGCTGGAGGAGGGCAGGGATGGAGAGGGGG  1000
      ||| ||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  CTT-GTACTAGCTGCTCCAGGGCTGGA-GAGGGCA-GGATGGAGAGGGGG  996

seq1  CTCATTCTTCCTAGCATCAGCATTATGGAAATCCAGACCAGTTTCGCTAG  1050
      |||||   |||||||||||||||||| |||||||||| ||||||||||||
seq2  CTCAT--CTCCTAGCATCAGCATTAT-GAAATCCAGA-CAGTTTCGCTAG  1042

seq1  CCCTGTCGTTATAGCAGGAGCCTGAGAAGGTTCTTGAAATCCTAGGAACA  1100
      ||||||||||| ||||| |  |||    |  ||||||||||||||    |
seq2  CCCTGTCGTTA-AGCAGAA--CTG----GAGTCTTGAAATCCTAG---AA  1082

seq1  CCCCATGTCTGTTGTCTAGGT  1121
      |||||  ||||||||||||||
seq2  CCCCAGTTCTGTTGTCTAGGT  1103