BAC Information

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BAC

Clone NameB6Ng01-133F12
Chromosome3 (Build37)
Map Location 75,623,126 - 75,812,306
singlet/doubletdoublet
Overlap geneGolph4
Upstream geneBC050789, Serpini2, Wdr49, Pdcd10, Serpini1
Downstream geneFstl5, LOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133F12.bB6Ng01-133F12.g
ACCDH933914DH933915
length1,2471,077
definitionDH933914|Mus musculus domesticus DNA, BAC clone: B6Ng01-133F12, 5' end.DH933915|Mus musculus domesticus DNA, BAC clone: B6Ng01-133F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,623,126 - 75,624,415)(75,811,218 - 75,812,306)
sequence
gaattctcaacagaggaatctgaaatggccacggagctcttaaatgttca
gcatccttagcaaatcaaaaggatgctgaagatgtgattagaagaaagat
gtcttagaaagaggagttttttcagctctcctttagaaagtcaaaactta
aatctgcacagctctattcctagaatgcatgctttccttggctggtaaac
gtgtaatcatctttgctatctttgagaaatggaaagaaaatgttaatctc
aaatttgcaacctttgggaaactattctgtcatttgctagaaacacatag
ctcagcatgaactattcaagtgatagtatatattgcgcctgaattattag
acaattttgaacaaaatctagaaaagaaaatcatatcttgaaagataaag
cctagatttttaaaaactgaaaatgtttgagaacaatcagttagactgtg
atccttctgataatttcatctcttgctttgttactttagtcagttactgg
gcatcttaagtacaaatctttttactcttttttctttggttaagagttgt
cagacacttatcaccatgcttatttgatagagatgtataataacaagtaa
acatattggtttcagccagggtgatcatctatgcataatttgaagcaagt
aaaatcatatggtatataaataagacaggatcatgtttcttatataaata
gcacaaagatcgcatggacacttggtaaaatgtggtttcttgatttcctt
ttaaatctattcaccaggaaagtgatgtggtccaacaaccagatgttcat
tgttgaatccatacaatagagccatgtatgatgtcaaattattgagaaaa
ccagccctttaaaacagaatcacagatctttagatatttcatcataatac
atattattatgttctgcctttcgtgaagactacagcaattttaacttctc
aaaatgtacatgataattatataccttggaatgttctgagctatagcatg
ttaatttatatattatagatggatgtctcagaatttaaattatcaggtat
cattttatattgaagcaaatgtcagaaataaggttatccaatagtacgaa
agaatttataaacttttttatttcaagaggatgtgatagatggaataggg
ttctttgacaaagagaattattagtaatatttacctttctttactgggga
ttggctaggcaaatgagagatgcctactccattattttccaatcata
gaattcagatgctgaagctaattttttggctcactttcattgtgaggcct
aaaagtgcagaggaaaaaaatgttctgttgggctcttgtaattactggac
tcagatctcttaaacctctgtcccagcattagctctccctgatcttacta
aatcctttcctctgtatggatctgagcaagaatgaaaagctctgttgagt
tttgacctgagctttgggacctctccaatggcaagtgaggtatctctaca
aattattacagcttgtagcacagaatggcctccttgccttggggaacaag
caggtgtactattgtggttggtgaagtatccatgggatgttgttaatctt
tggacagagtaggatggattatatgatttactagttccttgaaacttaat
tacttgtctttcccttcgatcttagatagtagaaccaacatgtaccagat
ttctcttttgaacttcagatctgacaataaaacctcaccaaggtaaaaac
agccagatgggctctctagagcattcctatgatgagataatcagtgttac
ctgtagtcctgccccaggtttatagaactgctcatctttccttatgggaa
ccctggttcagaggtggatgtgatttaatggtgacagaacaaaggttttc
agagaatataagtgagtataatggaggtccctgaatatgatgctcttcca
agtcattccatgccagtcccaaagcagaactagtccttccccctcaggat
atccagatggaggcaggaataagtctcaatgtagttttacagagattcta
actgtgctttccttggggatccatacatttgcagccatctagagagaagg
tggtcttctcttcgtttaccataacactccaataaacatgtcttgagatt
gtggcctactagaagccattcagattccaaattttgtccctattattgca
ttgcaggacaccaagacatttctgatttttttctgggaacaaaaaagaac
tgatcaataggtcaaataggcagtcatttattggttcactctaagctggc
tagcctcagcttcggtctgtcttattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75623126_75624415
seq2: B6Ng01-133F12.b_48_1294

seq1  GAATTCTCAACAGAGGAATCTGAAATGGCCACGGAGCTCTTAAATGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACAGAGGAATCTGAAATGGCCACGGAGCTCTTAAATGTTCA  50

seq1  GCATCCTTAGCAAATCAAAAGGATGCTGAAGATGTGATTAGAAGAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTTAGCAAATCAAAAGGATGCTGAAGATGTGATTAGAAGAAAGAT  100

seq1  GTCTTAGAAAGAGGAGTTTTTTCAGCTCTCCTTTAGAAAGTCAAAACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGAAAGAGGAGTTTTTTCAGCTCTCCTTTAGAAAGTCAAAACTTA  150

seq1  AATCTGCACAGCTCTATTCCTAGAATGCATGCTTTCCTTGGCTGGTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCACAGCTCTATTCCTAGAATGCATGCTTTCCTTGGCTGGTAAAC  200

seq1  GTGTAATCATCTTTGCTATCTTTGAGAAATGGAAAGAAAATGTTAATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCATCTTTGCTATCTTTGAGAAATGGAAAGAAAATGTTAATCTC  250

seq1  AAATTTGCAACCTTTGGGAAACTATTCTGTCATTTGCTAGAAACACATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCAACCTTTGGGAAACTATTCTGTCATTTGCTAGAAACACATAG  300

seq1  CTCAGCATGAACTATTCAAGTGATAGTATATATTGCGCCTGAATTATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATGAACTATTCAAGTGATAGTATATATTGCGCCTGAATTATTAG  350

seq1  ACAATTTTGAACAAAATCTAGAAAAGAAAATCATATCTTGAAAGATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTGAACAAAATCTAGAAAAGAAAATCATATCTTGAAAGATAAAG  400

seq1  CCTAGATTTTTAAAAACTGAAAATGTTTGAGAACAATCAGTTAGACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATTTTTAAAAACTGAAAATGTTTGAGAACAATCAGTTAGACTGTG  450

seq1  ATCCTTCTGATAATTTCATCTCTTGCTTTGTTACTTTAGTCAGTTACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCTGATAATTTCATCTCTTGCTTTGTTACTTTAGTCAGTTACTGG  500

seq1  GCATCTTAAGTACAAATCTTTTTACTCTTTTTTCTTTGGTTAAGAGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTAAGTACAAATCTTTTTACTCTTTTTTCTTTGGTTAAGAGTTGT  550

seq1  CAGACACTTATCACCATGCTTATTTGATAGAGATGTATAATAACAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTTATCACCATGCTTATTTGATAGAGATGTATAATAACAAGTAA  600

seq1  ACATATTGGTTTCAGCCAGGGTGATCATCTATGCATAATTTGAAGCAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTGGTTTCAGCCAGGGTGATCATCTATGCATAATTTGAAGCAAGT  650

seq1  AAAATCATATGGTATATAAATAAGACAGGATCATGTTTCTTATATAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATATGGTATATAAATAAGACAGGATCATGTTTCTTATATAAATA  700

seq1  GCACAAAGATCGCATGGACACTTGGTAAAATGTGGTTTCTTGATTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAGATCGCATGGACACTTGGTAAAATGTGGTTTCTTGATTTCCTT  750

seq1  TTAAATCTATTCACCAGGAAAGTGATGTGGTCCAACAACCAGATGTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTATTCACCAGGAAAGTGATGTGGTCCAACAACCAGATGTTCAT  800

seq1  TGTTGAATCCATACAATAGAGCCATGTATGATGTCAAATTATTGAGAAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTTGAATCCATACAATAGAGCCATGTATGATGTCAAATTATTGAG-AAA  849

seq1  ACCAGCCCTTCAAAACAGAATCACAGATC-TTAGATATTTCATCATAATA  899
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  ACCAGCCCTTTAAAACAGAATCACAGATCTTTAGATATTTCATCATAATA  899

seq1  CATATTAATTATGTTCTGCCTTTCGTGAAGACTACAGCAATTTTAACTTC  949
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATATT-ATTATGTTCTGCCTTTCGTGAAGACTACAGCAATTTTAACTTC  948

seq1  TCAAAATGTACATGATAATTATATACCTTGAAATGTTCTGAGCTATAGCA  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCAAAATGTACATGATAATTATATACCTTGGAATGTTCTGAGCTATAGCA  998

seq1  TGTTAATTTTATATATTATTAAGATGGATGTCTCAGAATTTTAAATTATC  1049
      |||||| ||||||||||||  ||||||||||||||||| |||||||||||
seq2  TGTTAA-TTTATATATTAT--AGATGGATGTCTCAGAA-TTTAAATTATC  1044

seq1  AGTTATTCATTTTATATATGAAGCAAATGTCAGAAAATAAAGGTATCCAA  1099
      || || ||||||||||| ||||||||||||||| |||||| | |||||||
seq2  AGGTA-TCATTTTATAT-TGAAGCAAATGTCAG-AAATAAGGTTATCCAA  1091

seq1  ATAAGTACAAAAAATATTTATAACACTTTTTTTAATTCCAAAGAGGAATA  1149
         ||||| ||| | |||||||| ||||||||  ||| | |||||||   
seq2  --TAGTACGAAAGA-ATTTATAA-ACTTTTTT--ATTTC-AAGAGGA--T  1132

seq1  GTGATAGGAATAGAATAGTGTTTCTTGACAAAGAGAAATTTAATATAGTT  1199
      |||||||  || |||||| |||  |||||||||||||  ||| ||    |
seq2  GTGATAG--ATGGAATAGGGTTCTTTGACAAAGAGAA--TTATTA---GT  1175

seq1  AATATTTTTACTTTTCTTTACATTGGTGTGATTTTGCATAAAAGCAAAAT  1249
      ||||  ||||| |||||||||     || |  || ||     ||  ||||
seq2  AATA--TTTACCTTTCTTTAC-----TGGGGATTGGC----TAGGCAAAT  1214

seq1  GAGAAAGAATAGGCTTATCTCATTTATATTTTCCAATCATA  1290
      |||     | | || ||   |||   |||||||||||||||
seq2  GAG-----AGATGCCTACTCCAT---TATTTTCCAATCATA  1247

seq1: chr3_75811218_75812306
seq2: B6Ng01-133F12.g_69_1145 (reverse)

seq1  GAATAAGACAGACCGGAGCTGAGAGCTAAGGCAGCCTAGAGTTGAAACCA  50
      ||||||||||||||| ||||||| ||| || |||| ||||| ||||  | 
seq2  GAATAAGACAGACCGAAGCTGAG-GCT-AGCCAGCTTAGAG-TGAA--CC  45

seq1  AATAAATGAACTGCCTATTTGACCTATTGATCAGTTTCTTTTTTTGTTCC  100
      |||||||| |||||||||||||||||||||||||||   |||||||||||
seq2  AATAAATG-ACTGCCTATTTGACCTATTGATCAGTT--CTTTTTTGTTCC  92

seq1  CAGAGAAATATCAGAATTGTCCTTTGGGTGTCCTTGCAATGC-ATAATAG  149
      |||| ||| ||||||| ||||   | ||||||| |||||||| |||||||
seq2  CAGAAAAAAATCAGAAATGTC---TTGGTGTCC-TGCAATGCAATAATAG  138

seq1  GGACAAAATTTGGAATCTGAATGGCTTCTAGTAGGCCACAATCTCAAGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGACAAAATTTGGAATCTGAATGGCTTCTAGTAGGCCACAATCTCAA-GA  187

seq1  CATGTTTATTTGGAGTGTTATGGTTAACGAAGAGAAGACCACCTTCTCTC  249
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  CATGTTTA-TTGGAGTGTTATGGTAAACGAAGAGAAGACCACCTTCTCTC  236

seq1  TAGATGGCTGCATATGTATGGAT-CCCATGGAAAGCACAGTTAGAATCTC  298
      |||||||||||| |||||||||| |||| |||||||||||||||||||||
seq2  TAGATGGCTGCAAATGTATGGATCCCCAAGGAAAGCACAGTTAGAATCTC  286

seq1  TGTAAAACTACATTGAGACTTATTCCTGCCTCCATCTGGATATCCTGAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACTACATTGAGACTTATTCCTGCCTCCATCTGGATATCCTGAGG  336

seq1  GGGAAGGACTAGTTCTGCTTTGGGACTGGCATGGAATGACTTGGAAGAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGACTAGTTCTGCTTTGGGACTGGCATGGAATGACTTGGAAGAGC  386

seq1  ATCATATTCAGGGACCTCCATTATACTCACTTATATTCTCTGAAAACCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTCAGGGACCTCCATTATACTCACTTATATTCTCTGAAAACCTT  436

seq1  TGTTCTGTCACCATTAAATCACATCCACCTCTGAACCAGGGTTCCCATAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTCACCATTAAATCACATCCACCTCTGAACCAGGGTTCCCATAA  486

seq1  GGAAAGATGAGCAGTTCTATAAACCTGGGGCAGGACTACAGGTAACACTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGATGAGCAGTTCTATAAACCTGGGGCAGGACTACAGGTAACACTG  536

seq1  ATTATCTCATCATAGGAATGCTCTAGAGAGCCCATCTGGCTGTTTTTACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCATCATAGGAATGCTCTAGAGAGCCCATCTGGCTGTTTTTACC  586

seq1  TTGGTGAGGTTTTATTGTCAGATCTGAAGTTCAAAAGAGAAATCTGGTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAGGTTTTATTGTCAGATCTGAAGTTCAAAAGAGAAATCTGGTAC  636

seq1  ATGTTGGTTCTACTATCTAAGATCGAAGGGAAAGACAAGTAATTAAGTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTTCTACTATCTAAGATCGAAGGGAAAGACAAGTAATTAAGTTT  686

seq1  CAAGGAACTAGTAAATCATATAATCCATCCTACTCTGTCCAAAGATTAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAACTAGTAAATCATATAATCCATCCTACTCTGTCCAAAGATTAAC  736

seq1  AACATCCCATGGATACTTCACCAACCACAATAGTACACCTGCTTGTTCCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCATGGATACTTCACCAACCACAATAGTACACCTGCTTGTTCCC  786

seq1  CAAGGCAAGGAGGCCATTCTGTGCTACAAGCTGTAATAATTTGTAGAGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAAGGAGGCCATTCTGTGCTACAAGCTGTAATAATTTGTAGAGAT  836

seq1  ACCTCACTTGCCATTGGAGAGGTCCCAAAGCTCAGGTCAAAACTCAACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTTGCCATTGGAGAGGTCCCAAAGCTCAGGTCAAAACTCAACAG  886

seq1  AGCTTTTCATTCTTGCTCAGATCCATACAGAGGAAAGGATTTAGTAAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCATTCTTGCTCAGATCCATACAGAGGAAAGGATTTAGTAAGAT  936

seq1  CAGGGAGAGCTAATGCTGGGACAGAGGTTTAAGAGATCTGAGTCCAGTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAGCTAATGCTGGGACAGAGGTTTAAGAGATCTGAGTCCAGTAA  986

seq1  TTACAAGAGCCCAACAGAACATTTTTTTCCTCTGCACTTTTAGGCCTCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGAGCCCAACAGAACATTTTTTTCCTCTGCACTTTTAGGCCTCAC  1036

seq1  AATGAAAGTGAGCCAAAAAATTAGCTTCAGCATCTGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGTGAGCCAAAAAATTAGCTTCAGCATCTGAATTC  1077