BAC Information

Click to search

BAC

Clone NameB6Ng01-133H07
Chromosome7 (Build37)3 (Build37)
Map Location 93,728,712 - 93,729,41641,059,099 - 41,059,737
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneVmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1
Downstream geneOlfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133H07.bB6Ng01-133H07.g
ACCDH933997DH933998
length969982
definitionDH933997|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H07, 5' end.DH933998|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(93,728,712 - 93,729,416)(41,059,099 - 41,059,737)
sequence
tcttgttttgtttcatttttaagattttgaagatattttttattttattg
tttagtttccatttgaattataatataatcatataatttctgtcctaacc
ttttatgccctgcagctccatttttgtcttaatttgttgaatattggaag
tggtgtgttgtaagaatatgtgtgttgtaagaatttggaattttgaaact
gaaaaggtctagaaattgagaagaccagttaactaggagaaaatgtcaaa
attagatgtctatttcaagaggttttagaaggaaacacagacatttgatg
tggaaaattagcagcaaatttttttgtggtctgcgtgttaatttggctgt
gtccatgtgtgtacgtcagtgggattgaacttgaagaaatagactaagtt
gtttgatggagaaacttttagtacagtataaaattaaggctgggcatggt
tatttatcaccctgtagactgaggtttataatggggaaactaatttaaaa
atttttttcagcttctgaaaaaaaagatcatctgtaatgagaaagttgta
gaaaagtgaatgcagagaaatcatctgtagttattaaaaatgatcaaaac
taattagaaattacataatttgcactaatgcaatagaaaaagtaccttga
aaaccagtttctatttatcaatacttgtgttttacaaccatcccggttta
ttaaaaaatgtgagtgatggagctaagaatgcaactaagagattccttgc
tcaaaacagcctctcagggagcttttttctgggtccatttacccaggttt
tattatgaaggcactcagaagccacatttatctatggtagataacaccag
gttattatttctcaacttgaaagaataactcaagaatacattggtatcac
cccattcagtgcttaatttacaggcatgcaaatgtcagagttttgggcaa
aagaaatgtttcaggaata
gaattctttgtttagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattattccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgactgtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtgaattctcgatcttacagcataagccattgctgtt
ctattcaggaattttccccctgtgcccatatcttcgaggcttttccccac
tttctcttctatacggttcagtgtctctggttttatgtgaacttccttgg
tccacttaaatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctctcttgtcgagaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctgttccatt
ggtctacttgtctgtcactataccagtacaatgtagtttttatcacaatt
gctctgtagtaaaactttaggtcaggcatggtgattccatcagaggttct
tttatccctgagaagagtttttgctaatctaggtttttttgttatttcag
atgaatttgcagattgctcttcctaattcgttgaagaattgagttggaat
tttgatggggattgcattgaatctgtatattgcttttggcaagacagcca
tttttacaatgttgatcctgccaatccatgagcatgggatgtaacttcct
aattaaaatttatttaaatacatcattaacagtatatactcctgctgtgt
actgtgtggcttgaatatgtttggcccatgggagtggcactatttgaagg
tatgggcattgtgagaagtgtgtcactgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93728712_93729416
seq2: B6Ng01-133H07.b_52_756

seq1  TCTTGTTTTGTTTCATTTTTAAGATTTTGAAGATATTTTTTATTTTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTTGTTTCATTTTTAAGATTTTGAAGATATTTTTTATTTTATTG  50

seq1  TTTAGTTTCCATTTGAATTATAATATAATCATATAATTTCTGTCCTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCCATTTGAATTATAATATAATCATATAATTTCTGTCCTAACC  100

seq1  TTTTATGCCCTGCAGCTCCATTTTTGTCTTAATTTGTTGAATATTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCCCTGCAGCTCCATTTTTGTCTTAATTTGTTGAATATTGGAAG  150

seq1  TGGTGTGTTGTAAGAATATGTGTGTTGTAAGAATTTGGAATTTTGAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTTGTAAGAATATGTGTGTTGTAAGAATTTGGAATTTTGAAACT  200

seq1  GAAAAGGTCTAGAAATTGAGAAGACCAGTTAACTAGGAGAAAATGTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTCTAGAAATTGAGAAGACCAGTTAACTAGGAGAAAATGTCAAA  250

seq1  ATTAGATGTCTATTTCAAGAGGTTTTAGAAGGAAACACAGACATTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGTCTATTTCAAGAGGTTTTAGAAGGAAACACAGACATTTGATG  300

seq1  TGGAAAATTAGCAGCAAATTTTTTTGTGGTCTGCGTGTTAATTTGGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTAGCAGCAAATTTTTTTGTGGTCTGCGTGTTAATTTGGCTGT  350

seq1  GTCCATGTGTGTACGTCAGTGGGATTGAACTTGAAGAAATAGACTAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTGTGTACGTCAGTGGGATTGAACTTGAAGAAATAGACTAAGTT  400

seq1  GTTTGATGGAGAAACTTTTAGTACAGTATAAAATTAAGGCTGGGCATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGGAGAAACTTTTAGTACAGTATAAAATTAAGGCTGGGCATGGT  450

seq1  TATTTATCACCCTGTAGACTGAGGTTTATAATGGGGAAACTAATTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCACCCTGTAGACTGAGGTTTATAATGGGGAAACTAATTTAAAA  500

seq1  ATTTTTTTCAGCTTCTGAAAAAAAAGATCATCTGTAATGAGAAAGTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCAGCTTCTGAAAAAAAAGATCATCTGTAATGAGAAAGTTGTA  550

seq1  GAAAAGTGAATGCAGAGAAATCATCTGTAGTTATTAAAAATGATCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGAATGCAGAGAAATCATCTGTAGTTATTAAAAATGATCAAAAC  600

seq1  TAATTAGAAATTACATAATTTGCACTAATGCAATAGAAAAAGTACCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGAAATTACATAATTTGCACTAATGCAATAGAAAAAGTACCTTGA  650

seq1  AAACCAGTTTCTATTTATCAATACTTGTGTTTTACAACCATCCCGGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGTTTCTATTTATCAATACTTGTGTTTTACAACCATCCCGGTTTA  700

seq1  TTAAA  705
      |||||
seq2  TTAAA  705

seq1: chr3_41059099_41059737
seq2: B6Ng01-133H07.g_70_711 (reverse)

seq1  CTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTG  50
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGATGGAATCACCATGCCTGACCTAAAGTTTTACTACAGAGCAATTGTG  50

seq1  ATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGCAGACCAATGGAA  100
      ||||||||| ||| ||||||||||||||||||||||| ||||||||||||
seq2  ATAAAAACTACATTGTACTGGTATAGTGACAGACAAGTAGACCAATGGAA  100

seq1  TAGAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCT  150
       |||||||||||| |||||| ||| |||||||||||||||||||||||||
seq2  CAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCT  150

seq1  --TCGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCA  198
        |||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  TCTCGACAAGAGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCA  200

seq1  ACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATT  250

seq1  GATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGA  298
      |||||| ||||||||||||||||||||||||||| |||||||| ||||||
seq2  GATCCATTCCTATCTCCTTGTACTAAGGTCAAATTTAAGTGGACCAAGGA  300

seq1  ACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  348
      |   ||||||||||||||||||||||| | |||||| |||||||||||||
seq2  AGTTCACATAAAACCAGAGACACTGAACCGTATAGAAGAGAAAGTGGGGA  350

seq1  AAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCA  398
      ||||||| |||||||||| |||||||| |||||||||| |||||||||||
seq2  AAAGCCTCGAAGATATGGGCACAGGGGGAAAATTCCTGAATAGAACAGCA  400

seq1  ATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACT  448
      ||||||| ||||||||||| ||||||  ||||||||||||||||||||||
seq2  ATGGCTTATGCTGTAAGATCGAGAATTCACAAATGGGACCTCATGAAACT  450

seq1  GCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG-GCAC  497
      ||||||||||||||||||||||||||| |||||||||||||||||  |||
seq2  GCAAAGCTTCTGCAAGGCAAAAGACACAGTCAATAAGACAAAAAGACCAC  500

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGAATA  550

seq1  ATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAA  597
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  ATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAA  600

seq1  TAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  639
      ||||||||||||||||||||||||||| ||||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAACTAAACAAAGAATT  642