BAC Information

Click to search

BAC

Clone NameB6Ng01-133P15
Chromosome3 (Build37)
Map Location 41,059,226 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133P15.bB6Ng01-133P15.g
ACCDH934389DH934390
length9681,178
definitionDH934389|Mus musculus domesticus DNA, BAC clone: B6Ng01-133P15, 5' end.DH934390|Mus musculus domesticus DNA, BAC clone: B6Ng01-133P15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctagagtccacgttcttgagttctttatatatattgggtattgttccc
aatctgatttaggactgataaagatcctttcactatctgttagtggtctt
tttgtgttattaacggcgtctttgccttacagaagctttgcaattttatg
aggtcccatttgttgattctcaatcttacagcacaagccattgctgttct
attcaggaatttttctcctgtgcccatatcttcgaggcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttaatc
cacttagatttgaccttagtacaaggagataggagtggataaattcgggt
tcttctacatgataaccaacagttctgccagcaccatttgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcgaagatcaactga
ccataggtgtgtcggttcatttctgggtcttcatttctattccagtggtc
tacttgtctgtcgctataccagtaccaagcagtttttaatcacaatttct
ctgtagtacagctttagatcaggcatggtgattccaccagaggttctttt
atgcttgaggagagatttgctatcctaggttttttgttattccaaatgga
tttgcaggttgctctttctaattcaatgaagaattgacttgaaattttga
tgatgattgcattgaatctgtagattgctttcagcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatgttttttatttcttttcttcagagacttgaagttcttatcataca
ggtctttcacttctttagttaaagttactccaaggtattttatgttattt
gtgactactgagatggtg
gaattcagaacttttcagctggggaacaggagtaccagtgagtacagctt
tacaaggtaagtctggtcttaaactttctaaggaaagtcaagacagtcta
tcagaagtaaagtggaaaatagctttacaaggtatgtttggccttgaact
ttctctagtgttaggagcccttttgttccttttcacatgttatcaagtgg
ttaaggcagggcagattctggatgaaattcgagacaatctatcagaagta
aagcggggagagagagtaggagcaaagagaaaatatggtacacaaaataa
gcatacaggcctttccaagggtcttgaacccgaggaaaagtttaggtcag
gtaagaatacctggggagagattagaaggaaggagaaggaaaaagaaaag
aaaaaagatcaattagcggaggtctctaggagaaggagcctatactcatc
actaggtgagctcaaggagccagttcttaatagttctgaatcagatgaaa
aggctattagggcctggaaggcgctctcccgagcaggtgaagccactgga
caataatgacagaggcaggctcttgcagcctacaaggtcttattgtctac
cctggagttgtagatcaagattataaaggggaacttcaggttctctgttc
ttgtcctcaagttgtcttttctatatcacaaagggacagaatagcccaac
taataattttgccaagcctacatggctgttttttcttcctctggtattcc
tagagctgcaagagggattggttctactgaaaatgattctgattacttaa
taatgcctttagattgttgtcaaattttatctactcacgtaggggtaaac
cctcgtggcgtcagccattacaggtctgacaaatggatgtcacgcatatt
tcctccttgagagaatcaatattacatgtttagataaaagagatcacctc
cataccttaatgatttcaaagctgttggagatattatggctcagactttt
taagatcttcgctgagttagctttgtgttttagaaggagatctcattctc
cctcctaggctcttactctagctgctacaggccttacaaagtgggaaagc
tacgatccataacgtatgagatcggactcagtgtgtcttaagaacgacat
gccacgcagtttgtgtcgcaagagggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059226_41059737
seq2: B6Ng01-133P15.b_49_559 (reverse)

seq1  ACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGT  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACACACCTATGGTCAGTTGATCTTCGACAAGGGAGCTAAAACCATCCAGT  50

seq1  GGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTA  100
      |||| |||||||||||||||||||||||||||||||| ||||| | ||||
seq2  GGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCAGAACTGTTGGTTA  100

seq1  TCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGT  150
      |||||||||||||  |||||| ||||||||||||||||||||||||||||
seq2  TCATGTAGAAGAACCCGAATTTATCCACTCCTATCTCCTTGTACTAAGGT  150

seq1  CAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAAC  200
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  CAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAAC  200

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAA  250
      |||||||||||||||||||||||||||| |||||||||| |||||| |||
seq2  TTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGATATGGGCACAGGAGAA  250

seq1  AAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGA  300
      ||||||||| |||||||||||||||||||||||||||||||||||||  |
seq2  AAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATCAA  300

seq1  CAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCG  350
      ||||||||||||||| ||| ||||||||||||| ||||| |||||| |||
seq2  CAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGC-AAAGACGCCG  349

seq1  TCAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTAT  399
      | ||||| ||||||||  ||| ||||||| | ||||||||||||| |  |
seq2  TTAATAACACAAAAAGACCACTAACAGATAGTGAAAGGATCTTTATCAGT  399

seq1  CCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAA  449
      |||||||||||| ||| || |||| ||||||||||| |||||||||||||
seq2  CCTAAATCAGATTGGGAAC-AATACCCAATATATATAAAGAACTCAAGAA  448

seq1  GGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  499
       ||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGACTCTAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  498

seq1  TAAACAAAGAATT  512
      |||||||||||||
seq2  TAAACAAAGAATT  511